RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 KRTAP25-1Q3LHN0 102 aa3.26□□□□□ -1.89
PABPC1-202ENST00000517403 TRAV7A0A075B6U4 112 aa3.25□□□□□ -1.89
PABPC1-202ENST00000517403 MT-ATP8P03928 68 aa3.25□□□□□ -1.89
PABPC1-202ENST00000517403 DSTQ03001 7570 aaKnown RBP3.24□□□□□ -1.89
PABPC1-202ENST00000517403 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
PABPC1-202ENST00000517403 KRTAP19-3Q7Z4W3 81 aa3.21□□□□□ -1.9
PABPC1-202ENST00000517403 ACYP2P14621 99 aa3.19□□□□□ -1.9
PABPC1-202ENST00000517403 SNURFQ9Y675 71 aa3.19□□□□□ -1.9
PABPC1-202ENST00000517403 KRTAP19-5Q3LI72 72 aa3.16□□□□□ -1.9
PABPC1-202ENST00000517403 A0A1B0GU33 70 aa3.15□□□□□ -1.91
PABPC1-202ENST00000517403 KRTAP4-3Q9BYR4 195 aa3.15□□□□□ -1.91
PABPC1-202ENST00000517403 CCDC179H3BU77 68 aa3.14□□□□□ -1.91
PABPC1-202ENST00000517403 TMEM258P61165 79 aa3.13□□□□□ -1.91
PABPC1-202ENST00000517403 LCE3EQ5T5B0 92 aa3.13□□□□□ -1.91
PABPC1-202ENST00000517403 LCE1EQ5T753 118 aa3.13□□□□□ -1.91
PABPC1-202ENST00000517403 CHKB-CPT1BH3BT56 60 aa3.11□□□□□ -1.91
PABPC1-202ENST00000517403 SPATA8Q6RVD6 105 aa3.11□□□□□ -1.91
PABPC1-202ENST00000517403 MT1MQ8N339 61 aa3.11□□□□□ -1.91
PABPC1-202ENST00000517403 CYSTM1Q9H1C7 97 aa3.1□□□□□ -1.91
PABPC1-202ENST00000517403 A0A0D9SG42 100 aa3.09□□□□□ -1.91
PABPC1-202ENST00000517403 KRTAP12-1P59990 96 aa3.09□□□□□ -1.91
PABPC1-202ENST00000517403 SPTSSBQ8NFR3 76 aa3.09□□□□□ -1.91
PABPC1-202ENST00000517403 MT1LQ93083 61 aa3.09□□□□□ -1.91
PABPC1-202ENST00000517403 MT4P47944 62 aa3.07□□□□□ -1.92
PABPC1-202ENST00000517403 COA5Q86WW8 74 aa3.07□□□□□ -1.92
PABPC1-202ENST00000517403 HMCN1Q96RW7 5635 aa3.07□□□□□ -1.92
PABPC1-202ENST00000517403 AHNAK2Q8IVF2 5795 aa3.06□□□□□ -1.92
PABPC1-202ENST00000517403 MT1GP13640 62 aa3.05□□□□□ -1.92
PABPC1-202ENST00000517403 KRTAP5-4Q6L8H1 288 aa3.04□□□□□ -1.92
PABPC1-202ENST00000517403 BRK1Q8WUW1 75 aa3.04□□□□□ -1.92
PABPC1-202ENST00000517403 COX7CP15954 63 aa3.03□□□□□ -1.92
PABPC1-202ENST00000517403 LCE3AQ5TA76 89 aa3.03□□□□□ -1.92
PABPC1-202ENST00000517403 SERP1Q9Y6X1 66 aa3.03□□□□□ -1.92
PABPC1-202ENST00000517403 SERP2Q8N6R1 65 aa3.01□□□□□ -1.93
PABPC1-202ENST00000517403 KRTAP5-10Q6L8G5 202 aa3□□□□□ -1.93
PABPC1-202ENST00000517403 C10orf95Q9H7T3 257 aa3□□□□□ -1.93
PABPC1-202ENST00000517403 KTN1-AS1Q86SY8 53 aa2.99□□□□□ -1.93
PABPC1-202ENST00000517403 ATP5EP56381 51 aaPredicted RBP2.98□□□□□ -1.93
PABPC1-202ENST00000517403 KRTAP5-1Q6L8H4 278 aa2.98□□□□□ -1.93
PABPC1-202ENST00000517403 H7BZZ5 65 aa2.95□□□□□ -1.94
PABPC1-202ENST00000517403 PP632Q6XCG6 107 aa2.95□□□□□ -1.94
PABPC1-202ENST00000517403 KRTAP5-5Q701N2 237 aaPredicted RBP2.91□□□□□ -1.94
PABPC1-202ENST00000517403 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
PABPC1-202ENST00000517403 KRTAP20-2Q3LI61 65 aa2.87□□□□□ -1.95
PABPC1-202ENST00000517403 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
PABPC1-202ENST00000517403 KRTAP12-3P60328 96 aa2.83□□□□□ -1.96
PABPC1-202ENST00000517403 Q1T7F1 81 aa2.83□□□□□ -1.96
PABPC1-202ENST00000517403 A0A1B0GU69 56 aa2.82□□□□□ -1.96
PABPC1-202ENST00000517403 TNP1P09430 55 aa2.82□□□□□ -1.96
PABPC1-202ENST00000517403 SPRR5A0A1B0GTR4 108 aa2.81□□□□□ -1.96
PABPC1-202ENST00000517403 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
PABPC1-202ENST00000517403 SYNE1Q8NF91 8797 aaKnown RBP2.73□□□□□ -1.97
PABPC1-202ENST00000517403 CDC42SE1Q9NRR8 79 aa2.71□□□□□ -1.98
PABPC1-202ENST00000517403 KRTAP9-6A8MVA2 160 aa2.7□□□□□ -1.98
PABPC1-202ENST00000517403 LINC01558Q9Y6Z2 57 aa2.7□□□□□ -1.98
PABPC1-202ENST00000517403 KRTAP12-4P60329 112 aa2.66□□□□□ -1.98
PABPC1-202ENST00000517403 KRTAP5-2Q701N4 177 aa2.66□□□□□ -1.98
PABPC1-202ENST00000517403 ROMO1P60602 79 aa2.65□□□□□ -1.99
PABPC1-202ENST00000517403 KRTAP6-1Q3LI64 71 aa2.65□□□□□ -1.99
PABPC1-202ENST00000517403 MT1AP04731 61 aa2.6□□□□□ -1.99
PABPC1-202ENST00000517403 PRR15LQ9BU68 103 aa2.6□□□□□ -1.99
PABPC1-202ENST00000517403 KRTAP5-8O75690 187 aa2.59□□□□□ -1.99
PABPC1-202ENST00000517403 UQCR11O14957 56 aa2.57□□□□□ -2
PABPC1-202ENST00000517403 MIR22HGQ0VDD5 57 aa2.56□□□□□ -2
PABPC1-202ENST00000517403 KRTAP6-2Q3LI66 62 aa2.52□□□□□ -2.01
PABPC1-202ENST00000517403 OBSCNQ5VST9 7968 aa2.52□□□□□ -2.01
PABPC1-202ENST00000517403 MUC5ACP98088 5654 aa2.52□□□□□ -2.01
PABPC1-202ENST00000517403 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
PABPC1-202ENST00000517403 MUC5BQ9HC84 5762 aaPredicted RBP2.45□□□□□ -2.02
PABPC1-202ENST00000517403 INE1O15225 51 aa2.27□□□□□ -2.05
PABPC1-202ENST00000517403 LCE1BQ5T7P3 118 aa2.08□□□□□ -2.08
PABPC1-202ENST00000517403 LCE1CQ5T751 118 aa2.02□□□□□ -2.09
PABPC1-202ENST00000517403 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
PABPC1-202ENST00000517403 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
PABPC1-202ENST00000517403 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
PABPC1-202ENST00000517403 PRM1P04553 51 aa1.24□□□□□ -2.21
PABPC1-202ENST00000517403 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
PABPC1-202ENST00000517403 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 120 ms