RNA–Protein interactions for RNA: ENST00000514534.1

DDR1-276, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-276ENST00000514534 SPINT4Q6UDR6 99 aa3.41□□□□□ -1.86
DDR1-276ENST00000514534 LCE3AQ5TA76 89 aa3.37□□□□□ -1.87
DDR1-276ENST00000514534 KRTAP5-5Q701N2 237 aaPredicted RBP3.37□□□□□ -1.87
DDR1-276ENST00000514534 LCE1EQ5T753 118 aa3.34□□□□□ -1.87
DDR1-276ENST00000514534 A0A1B0GV90 55 aa3.33□□□□□ -1.88
DDR1-276ENST00000514534 SEC61GP60059 68 aa3.33□□□□□ -1.88
DDR1-276ENST00000514534 TNP1P09430 55 aa3.32□□□□□ -1.88
DDR1-276ENST00000514534 KRTAP12-1P59990 96 aa3.32□□□□□ -1.88
DDR1-276ENST00000514534 SPATA8Q6RVD6 105 aa3.32□□□□□ -1.88
DDR1-276ENST00000514534 SERP1Q9Y6X1 66 aa3.32□□□□□ -1.88
DDR1-276ENST00000514534 SYNE1Q8NF91 8797 aaKnown RBP3.32□□□□□ -1.88
DDR1-276ENST00000514534 MT3P25713 68 aa3.28□□□□□ -1.88
DDR1-276ENST00000514534 SMIM20Q8N5G0 67 aa3.27□□□□□ -1.89
DDR1-276ENST00000514534 SPANXA2-OT1Q8N9U9 137 aa3.27□□□□□ -1.89
DDR1-276ENST00000514534 A0A1B0GU33 70 aa3.26□□□□□ -1.89
DDR1-276ENST00000514534 KRTAP12-3P60328 96 aa3.25□□□□□ -1.89
DDR1-276ENST00000514534 SNURFQ9Y675 71 aa3.23□□□□□ -1.89
DDR1-276ENST00000514534 J3QR89 54 aa3.21□□□□□ -1.9
DDR1-276ENST00000514534 SMIM26A0A096LP01 95 aa3.2□□□□□ -1.9
DDR1-276ENST00000514534 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
DDR1-276ENST00000514534 COA5Q86WW8 74 aa3.18□□□□□ -1.9
DDR1-276ENST00000514534 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
DDR1-276ENST00000514534 K7ERU9 68 aa3.13□□□□□ -1.91
DDR1-276ENST00000514534 MUC5ACP98088 5654 aa3.11□□□□□ -1.91
DDR1-276ENST00000514534 A8MU10 97 aa3.11□□□□□ -1.91
DDR1-276ENST00000514534 A0A0A0MQY5 61 aa3.09□□□□□ -1.91
DDR1-276ENST00000514534 AHNAKQ09666 5890 aaKnown RBP3.09□□□□□ -1.92
DDR1-276ENST00000514534 MUC5BQ9HC84 5762 aaPredicted RBP3.08□□□□□ -1.92
DDR1-276ENST00000514534 SERP2Q8N6R1 65 aa3.07□□□□□ -1.92
DDR1-276ENST00000514534 PCP4P48539 62 aa3.06□□□□□ -1.92
DDR1-276ENST00000514534 A0A1B0GU69 56 aa3.05□□□□□ -1.92
DDR1-276ENST00000514534 MT1AP04731 61 aa3.05□□□□□ -1.92
DDR1-276ENST00000514534 KRTAP6-1Q3LI64 71 aa3.03□□□□□ -1.92
DDR1-276ENST00000514534 LCE1FQ5T754 118 aa3.03□□□□□ -1.92
DDR1-276ENST00000514534 OBSCNQ5VST9 7968 aa3□□□□□ -1.93
DDR1-276ENST00000514534 KRTAP5-1Q6L8H4 278 aa3□□□□□ -1.93
DDR1-276ENST00000514534 KRTAP25-1Q3LHN0 102 aa2.98□□□□□ -1.93
DDR1-276ENST00000514534 KRTAP9-6A8MVA2 160 aa2.97□□□□□ -1.93
DDR1-276ENST00000514534 KRTAP6-2Q3LI66 62 aa2.97□□□□□ -1.93
DDR1-276ENST00000514534 LCE3CQ5T5A8 94 aa2.95□□□□□ -1.94
DDR1-276ENST00000514534 SVIPQ8NHG7 77 aa2.88□□□□□ -1.95
DDR1-276ENST00000514534 ANAPC13Q9BS18 74 aa2.88□□□□□ -1.95
DDR1-276ENST00000514534 PRR15LQ9BU68 103 aa2.88□□□□□ -1.95
DDR1-276ENST00000514534 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
DDR1-276ENST00000514534 H7BZZ5 65 aa2.84□□□□□ -1.95
DDR1-276ENST00000514534 COX7CP15954 63 aa2.83□□□□□ -1.96
DDR1-276ENST00000514534 CCDC179H3BU77 68 aa2.81□□□□□ -1.96
DDR1-276ENST00000514534 UQCR11O14957 56 aa2.76□□□□□ -1.97
DDR1-276ENST00000514534 K7ERS5 55 aa2.72□□□□□ -1.97
DDR1-276ENST00000514534 LINC01558Q9Y6Z2 57 aa2.72□□□□□ -1.97
DDR1-276ENST00000514534 TMEM258P61165 79 aa2.7□□□□□ -1.98
DDR1-276ENST00000514534 ATP5EP56381 51 aaPredicted RBP2.67□□□□□ -1.98
DDR1-276ENST00000514534 MIR22HGQ0VDD5 57 aa2.64□□□□□ -1.99
DDR1-276ENST00000514534 NDUFAF8A1L188 74 aa2.61□□□□□ -1.99
DDR1-276ENST00000514534 LCE3EQ5T5B0 92 aa2.61□□□□□ -1.99
DDR1-276ENST00000514534 RPS28P62857 69 aaKnown RBP2.6□□□□□ -1.99
DDR1-276ENST00000514534 PRAC1Q96KF2 57 aa2.55□□□□□ -2
DDR1-276ENST00000514534 LCE1BQ5T7P3 118 aa2.53□□□□□ -2
DDR1-276ENST00000514534 V9GYY9 64 aa2.51□□□□□ -2.01
DDR1-276ENST00000514534 Q1T7F1 81 aa2.49□□□□□ -2.01
DDR1-276ENST00000514534 CDC42SE1Q9NRR8 79 aa2.49□□□□□ -2.01
DDR1-276ENST00000514534 PSPHP1O15172 72 aa2.48□□□□□ -2.01
DDR1-276ENST00000514534 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
DDR1-276ENST00000514534 A6NED7 52 aa2.42□□□□□ -2.02
DDR1-276ENST00000514534 ROMO1P60602 79 aa2.41□□□□□ -2.02
DDR1-276ENST00000514534 BRK1Q8WUW1 75 aa2.34□□□□□ -2.03
DDR1-276ENST00000514534 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
DDR1-276ENST00000514534 PRO0628Q9UI54 55 aa2.24□□□□□ -2.05
DDR1-276ENST00000514534 PMAIP1Q13794 54 aa2.21□□□□□ -2.06
DDR1-276ENST00000514534 KTN1-AS1Q86SY8 53 aa2.09□□□□□ -2.07
DDR1-276ENST00000514534 LCE3DQ9BYE3 92 aa2.07□□□□□ -2.08
DDR1-276ENST00000514534 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
DDR1-276ENST00000514534 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
DDR1-276ENST00000514534 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
DDR1-276ENST00000514534 LUZP6Q538Z0 58 aa1.72□□□□□ -2.13
DDR1-276ENST00000514534 INE1O15225 51 aa1.33□□□□□ -2.2
DDR1-276ENST00000514534 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
DDR1-276ENST00000514534 PRM1P04553 51 aa1.21□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 8.4 ms