RNA–Protein interactions for RNA: ENST00000514095.5

PAPD4-215, Transcript of Poly(A) RNA polymerase GLD2, human

TSL 4

Gene PAPD4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAPD4-215	ENST00000514095	LCE1D	Q5T752	114 aa		5.15	□□□□□ -1.59
PAPD4-215	ENST00000514095	LINC01558	Q9Y6Z2	57 aa		5.15	□□□□□ -1.59
PAPD4-215	ENST00000514095	LCE4A	Q5TA78	99 aa		5.14	□□□□□ -1.59
PAPD4-215	ENST00000514095	MT4	P47944	62 aa		5.11	□□□□□ -1.59
PAPD4-215	ENST00000514095	KRTAP4-3	Q9BYR4	195 aa		5.1	□□□□□ -1.59
PAPD4-215	ENST00000514095	UQCR11	O14957	56 aa		5.07	□□□□□ -1.6
PAPD4-215	ENST00000514095	HMCN1	Q96RW7	5635 aa		5.07	□□□□□ -1.6
PAPD4-215	ENST00000514095	TMEM258	P61165	79 aa		5.05	□□□□□ -1.6
PAPD4-215	ENST00000514095	KRTAP12-3	P60328	96 aa		5.04	□□□□□ -1.6
PAPD4-215	ENST00000514095	KRTAP5-4	Q6L8H1	288 aa		5	□□□□□ -1.61
PAPD4-215	ENST00000514095	KRTAP4-7	Q9BYR0	210 aa		4.96	□□□□□ -1.62
PAPD4-215	ENST00000514095	MIR22HG	Q0VDD5	57 aa		4.95	□□□□□ -1.62
PAPD4-215	ENST00000514095	KRTAP25-1	Q3LHN0	102 aa		4.92	□□□□□ -1.62
PAPD4-215	ENST00000514095		K7ERS5	55 aa		4.91	□□□□□ -1.62
PAPD4-215	ENST00000514095	AHNAK2	Q8IVF2	5795 aa		4.91	□□□□□ -1.62
PAPD4-215	ENST00000514095	KRTAP4-12	Q9BQ66	201 aa		4.89	□□□□□ -1.63
PAPD4-215	ENST00000514095	KRTAP9-9	Q9BYP9	154 aa		4.82	□□□□□ -1.64
PAPD4-215	ENST00000514095	KRTAP9-4	Q9BYQ2	154 aa		4.82	□□□□□ -1.64
PAPD4-215	ENST00000514095		V9GYY9	64 aa		4.82	□□□□□ -1.64
PAPD4-215	ENST00000514095	PSPHP1	O15172	72 aa		4.81	□□□□□ -1.64
PAPD4-215	ENST00000514095	KRTAP5-10	Q6L8G5	202 aa		4.8	□□□□□ -1.64
PAPD4-215	ENST00000514095	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.77	□□□□□ -1.65
PAPD4-215	ENST00000514095		Q1T7F1	81 aa		4.75	□□□□□ -1.65
PAPD4-215	ENST00000514095	KRTAP19-4	Q3LI73	84 aa		4.75	□□□□□ -1.65
PAPD4-215	ENST00000514095	KRTAP20-2	Q3LI61	65 aa		4.74	□□□□□ -1.65
PAPD4-215	ENST00000514095	KRTAP12-4	P60329	112 aa		4.73	□□□□□ -1.65
PAPD4-215	ENST00000514095	SPRR5	A0A1B0GTR4	108 aa		4.72	□□□□□ -1.65
PAPD4-215	ENST00000514095	KRTAP23-1	A1A580	65 aa		4.72	□□□□□ -1.65
PAPD4-215	ENST00000514095	KRTAP15-1	Q3LI76	137 aa		4.68	□□□□□ -1.66
PAPD4-215	ENST00000514095	KRTAP5-3	Q6L8H2	238 aa		4.68	□□□□□ -1.66
PAPD4-215	ENST00000514095		A6NED7	52 aa		4.66	□□□□□ -1.66
PAPD4-215	ENST00000514095	LCE3C	Q5T5A8	94 aa		4.63	□□□□□ -1.67
PAPD4-215	ENST00000514095	KRTAP5-7	Q6L8G8	165 aa		4.63	□□□□□ -1.67
PAPD4-215	ENST00000514095	CDC42SE1	Q9NRR8	79 aa		4.61	□□□□□ -1.67
PAPD4-215	ENST00000514095	SYNE1	Q8NF91	8797 aa	Known RBP	4.58	□□□□□ -1.68
PAPD4-215	ENST00000514095	ROMO1	P60602	79 aa		4.52	□□□□□ -1.69
PAPD4-215	ENST00000514095	RPS28	P62857	69 aa	Known RBP	4.51	□□□□□ -1.69
PAPD4-215	ENST00000514095	MT1A	P04731	61 aa		4.45	□□□□□ -1.7
PAPD4-215	ENST00000514095	KRTAP4-2	Q9BYR5	136 aa		4.44	□□□□□ -1.7
PAPD4-215	ENST00000514095	KRTAP6-1	Q3LI64	71 aa		4.42	□□□□□ -1.7
PAPD4-215	ENST00000514095	KRTAP5-2	Q701N4	177 aa		4.36	□□□□□ -1.71
PAPD4-215	ENST00000514095	KRTAP4-11	Q9BYQ6	195 aa		4.35	□□□□□ -1.71
PAPD4-215	ENST00000514095	KRTAP9-6	A8MVA2	160 aa		4.34	□□□□□ -1.71
PAPD4-215	ENST00000514095	KRTAP6-2	Q3LI66	62 aa		4.25	□□□□□ -1.73
PAPD4-215	ENST00000514095	PCP4	P48539	62 aa		4.24	□□□□□ -1.73
PAPD4-215	ENST00000514095	KRTAP5-8	O75690	187 aa		4.19	□□□□□ -1.74
PAPD4-215	ENST00000514095	OBSCN	Q5VST9	7968 aa		4.12	□□□□□ -1.75
PAPD4-215	ENST00000514095	MT3	P25713	68 aa		4.1	□□□□□ -1.75
PAPD4-215	ENST00000514095	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.07	□□□□□ -1.76
PAPD4-215	ENST00000514095	AHNAK	Q09666	5890 aa	Known RBP	4.05	□□□□□ -1.76
PAPD4-215	ENST00000514095	MUC5AC	P98088	5654 aa		4.03	□□□□□ -1.76
PAPD4-215	ENST00000514095	KRTAP5-1	Q6L8H4	278 aa		3.93	□□□□□ -1.78
PAPD4-215	ENST00000514095	BRK1	Q8WUW1	75 aa		3.88	□□□□□ -1.79
PAPD4-215	ENST00000514095	LCE1E	Q5T753	118 aa		3.76	□□□□□ -1.81
PAPD4-215	ENST00000514095	SVIP	Q8NHG7	77 aa		3.73	□□□□□ -1.81
PAPD4-215	ENST00000514095	PMAIP1	Q13794	54 aa		3.64	□□□□□ -1.83
PAPD4-215	ENST00000514095		H3BS24	57 aa		3.61	□□□□□ -1.83
PAPD4-215	ENST00000514095	LCE1B	Q5T7P3	118 aa		3.57	□□□□□ -1.84
PAPD4-215	ENST00000514095	PRAC1	Q96KF2	57 aa		3.52	□□□□□ -1.85
PAPD4-215	ENST00000514095	LCE1C	Q5T751	118 aa		3.49	□□□□□ -1.85
PAPD4-215	ENST00000514095	LCE3D	Q9BYE3	92 aa		3.34	□□□□□ -1.87
PAPD4-215	ENST00000514095	PRO0628	Q9UI54	55 aa		3.24	□□□□□ -1.89
PAPD4-215	ENST00000514095	KRTAP5-11	Q6L8G4	156 aa		3.16	□□□□□ -1.9
PAPD4-215	ENST00000514095	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.15	□□□□□ -1.91
PAPD4-215	ENST00000514095	KTN1-AS1	Q86SY8	53 aa		3.14	□□□□□ -1.91
PAPD4-215	ENST00000514095	LCE3E	Q5T5B0	92 aa		3.12	□□□□□ -1.91
PAPD4-215	ENST00000514095	LCE1F	Q5T754	118 aa		3.1	□□□□□ -1.91
PAPD4-215	ENST00000514095	LUZP6	Q538Z0	58 aa		3.04	□□□□□ -1.92
PAPD4-215	ENST00000514095		A0A0A0MQY5	61 aa		2.93	□□□□□ -1.94
PAPD4-215	ENST00000514095	KRTAP21-2	Q3LI59	83 aa		2.91	□□□□□ -1.94
PAPD4-215	ENST00000514095	PHGR1	C9JFL3	82 aa		2.83	□□□□□ -1.96
PAPD4-215	ENST00000514095	KRTAP4-4	Q9BYR3	166 aa		2.69	□□□□□ -1.98
PAPD4-215	ENST00000514095	MUC19	Q7Z5P9	8384 aa		2.55	□□□□□ -2
PAPD4-215	ENST00000514095	NDUFAF8	A1L188	74 aa		2.43	□□□□□ -2.02
PAPD4-215	ENST00000514095	PRM1	P04553	51 aa		2.3	□□□□□ -2.04
PAPD4-215	ENST00000514095	KRTAP21-1	Q3LI58	79 aa		2.15	□□□□□ -2.07
PAPD4-215	ENST00000514095	INE1	O15225	51 aa		1.79	□□□□□ -2.12
PAPD4-215	ENST00000514095	MUC16	Q8WXI7	14507 aa		1.78	□□□□□ -2.12

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