RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 MT1HL1P0DM35 61 aa1.27□□□□□ -2.21
CHD1-209ENST00000512844 HSPG2P98160 4391 aa1.27□□□□□ -2.21
CHD1-209ENST00000512844 DNHD1Q96M86 4753 aa1.26□□□□□ -2.21
CHD1-209ENST00000512844 MYCBP2O75592 4640 aa1.26□□□□□ -2.21
CHD1-209ENST00000512844 RYR2Q92736 4967 aa1.22□□□□□ -2.21
CHD1-209ENST00000512844 HYDINQ4G0P3 5121 aa1.2□□□□□ -2.22
CHD1-209ENST00000512844 RYR1P21817 5038 aa1.2□□□□□ -2.22
CHD1-209ENST00000512844 M0R2T5 61 aa1.19□□□□□ -2.22
CHD1-209ENST00000512844 HERC1Q15751 4861 aa1.19□□□□□ -2.22
CHD1-209ENST00000512844 SPRR2GQ9BYE4 73 aa1.18□□□□□ -2.22
CHD1-209ENST00000512844 RYR3Q15413 4870 aa1.16□□□□□ -2.22
CHD1-209ENST00000512844 KRTAP8-1Q8IUC2 63 aa1.16□□□□□ -2.22
CHD1-209ENST00000512844 MUC17Q685J3 4493 aa1.15□□□□□ -2.23
CHD1-209ENST00000512844 LRP2P98164 4655 aa1.14□□□□□ -2.23
CHD1-209ENST00000512844 KMT2CQ8NEZ4 4911 aaKnown RBP1.14□□□□□ -2.23
CHD1-209ENST00000512844 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
CHD1-209ENST00000512844 FLGP20930 4061 aaPredicted RBP1.14□□□□□ -2.23
CHD1-209ENST00000512844 KRTAP19-2Q3LHN2 52 aa1.13□□□□□ -2.23
CHD1-209ENST00000512844 KRTAP5-10Q6L8G5 202 aa1.13□□□□□ -2.23
CHD1-209ENST00000512844 KRTAP19-8Q3LI54 63 aa1.12□□□□□ -2.23
CHD1-209ENST00000512844 BIRC6Q9NR09 4857 aa1.1□□□□□ -2.23
CHD1-209ENST00000512844 KIAA1109Q2LD37 5005 aa1.09□□□□□ -2.23
CHD1-209ENST00000512844 HERC2O95714 4834 aa1.08□□□□□ -2.24
CHD1-209ENST00000512844 MT2AP02795 61 aa1.07□□□□□ -2.24
CHD1-209ENST00000512844 LPAP08519 4548 aa1.07□□□□□ -2.24
CHD1-209ENST00000512844 MT1HP80294 61 aa1.06□□□□□ -2.24
CHD1-209ENST00000512844 MT1FP04733 61 aa1.05□□□□□ -2.24
CHD1-209ENST00000512844 MT1XP80297 61 aa1.05□□□□□ -2.24
CHD1-209ENST00000512844 MT1BP07438 61 aa1.04□□□□□ -2.24
CHD1-209ENST00000512844 KRTAP19-5Q3LI72 72 aa1.01□□□□□ -2.25
CHD1-209ENST00000512844 ABCA13Q86UQ4 5058 aa1□□□□□ -2.25
CHD1-209ENST00000512844 KRTAP2-3P0C7H8 128 aa1□□□□□ -2.25
CHD1-209ENST00000512844 KRTAP2-4Q9BYR9 128 aa1□□□□□ -2.25
CHD1-209ENST00000512844 KRTAP2-1Q9BYU5 128 aa1□□□□□ -2.25
CHD1-209ENST00000512844 HMCN2Q8NDA2 5059 aa0.99□□□□□ -2.25
CHD1-209ENST00000512844 EPPK1P58107 5090 aaKnown RBP0.98□□□□□ -2.25
CHD1-209ENST00000512844 PCLOQ9Y6V0 5065 aa0.98□□□□□ -2.25
CHD1-209ENST00000512844 AHNAK2Q8IVF2 5795 aa0.97□□□□□ -2.25
CHD1-209ENST00000512844 MT1EP04732 61 aa0.95□□□□□ -2.26
CHD1-209ENST00000512844 FAT4Q6V0I7 4981 aa0.94□□□□□ -2.26
CHD1-209ENST00000512844 MT1LQ93083 61 aa0.94□□□□□ -2.26
CHD1-209ENST00000512844 KRTAP19-3Q7Z4W3 81 aa0.93□□□□□ -2.26
CHD1-209ENST00000512844 KRTAP19-7Q3SYF9 63 aa0.92□□□□□ -2.26
CHD1-209ENST00000512844 RNF213Q63HN8 5207 aa0.92□□□□□ -2.26
CHD1-209ENST00000512844 MT1GP13640 62 aa0.91□□□□□ -2.26
CHD1-209ENST00000512844 UBR4Q5T4S7 5183 aa0.91□□□□□ -2.26
CHD1-209ENST00000512844 MT1AP04731 61 aa0.88□□□□□ -2.27
CHD1-209ENST00000512844 MUC2Q02817 5179 aa0.88□□□□□ -2.27
CHD1-209ENST00000512844 KRTAP19-6Q3LI70 58 aa0.86□□□□□ -2.27
CHD1-209ENST00000512844 MT1MQ8N339 61 aa0.86□□□□□ -2.27
CHD1-209ENST00000512844 PRM1P04553 51 aa0.81□□□□□ -2.28
CHD1-209ENST00000512844 SPRR2FQ96RM1 72 aa0.81□□□□□ -2.28
CHD1-209ENST00000512844 SPRR2AP35326 72 aa0.8□□□□□ -2.28
CHD1-209ENST00000512844 SSPOA2VEC9 5147 aa0.79□□□□□ -2.28
CHD1-209ENST00000512844 USH2AO75445 5202 aa0.78□□□□□ -2.28
CHD1-209ENST00000512844 SYNE1Q8NF91 8797 aaKnown RBP0.78□□□□□ -2.28
CHD1-209ENST00000512844 SPRR2BP35325 72 aa0.77□□□□□ -2.29
CHD1-209ENST00000512844 KRTAP6-1Q3LI64 71 aa0.76□□□□□ -2.29
CHD1-209ENST00000512844 SPRR2EP22531 72 aa0.75□□□□□ -2.29
CHD1-209ENST00000512844 SPRR2DP22532 72 aa0.75□□□□□ -2.29
CHD1-209ENST00000512844 KRTAP6-2Q3LI66 62 aa0.75□□□□□ -2.29
CHD1-209ENST00000512844 KMT2DO14686 5537 aa0.73□□□□□ -2.29
CHD1-209ENST00000512844 KRTAP21-1Q3LI58 79 aa0.69□□□□□ -2.3
CHD1-209ENST00000512844 MUC12Q9UKN1 5478 aa0.68□□□□□ -2.3
CHD1-209ENST00000512844 MDN1Q9NU22 5596 aa0.64□□□□□ -2.31
CHD1-209ENST00000512844 DSTQ03001 7570 aaKnown RBP0.63□□□□□ -2.31
CHD1-209ENST00000512844 MACF1Q9UPN3 7388 aaKnown RBP0.63□□□□□ -2.31
CHD1-209ENST00000512844 SYNE2Q8WXH0 6885 aaKnown RBP0.61□□□□□ -2.31
CHD1-209ENST00000512844 FSIP2Q5CZC0 6907 aa0.6□□□□□ -2.31
CHD1-209ENST00000512844 KRTAP20-2Q3LI61 65 aa0.59□□□□□ -2.31
CHD1-209ENST00000512844 KRTAP20-1Q3LI63 56 aa0.58□□□□□ -2.32
CHD1-209ENST00000512844 MT4P47944 62 aa0.56□□□□□ -2.32
CHD1-209ENST00000512844 MUC5ACP98088 5654 aa0.56□□□□□ -2.32
CHD1-209ENST00000512844 NEBP20929 6669 aa0.54□□□□□ -2.32
CHD1-209ENST00000512844 PHGR1C9JFL3 82 aa0.52□□□□□ -2.33
CHD1-209ENST00000512844 MUC5BQ9HC84 5762 aaPredicted RBP0.46□□□□□ -2.34
CHD1-209ENST00000512844 AHNAKQ09666 5890 aaKnown RBP0.41□□□□□ -2.34
CHD1-209ENST00000512844 GPR98Q8WXG9 6306 aa0.34□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 87.4 ms