RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 SERP1Q9Y6X1 66 aa4.32□□□□□ -1.72
DDX41-215ENST00000512431 A0A1B0GU69 56 aa4.29□□□□□ -1.72
DDX41-215ENST00000512431 SEC61GP60059 68 aa4.28□□□□□ -1.72
DDX41-215ENST00000512431 SPATA8Q6RVD6 105 aa4.28□□□□□ -1.72
DDX41-215ENST00000512431 LINC01558Q9Y6Z2 57 aa4.28□□□□□ -1.72
DDX41-215ENST00000512431 A0A1B0GU33 70 aa4.27□□□□□ -1.73
DDX41-215ENST00000512431 KRTAP12-4P60329 112 aa4.24□□□□□ -1.73
DDX41-215ENST00000512431 SPINT4Q6UDR6 99 aa4.21□□□□□ -1.74
DDX41-215ENST00000512431 A8MU10 97 aa4.2□□□□□ -1.74
DDX41-215ENST00000512431 C10orf95Q9H7T3 257 aa4.2□□□□□ -1.74
DDX41-215ENST00000512431 PRR15LQ9BU68 103 aa4.19□□□□□ -1.74
DDX41-215ENST00000512431 KRTAP12-1P59990 96 aa4.17□□□□□ -1.74
DDX41-215ENST00000512431 Q1T7F1 81 aa4.16□□□□□ -1.74
DDX41-215ENST00000512431 SMIM26A0A096LP01 95 aa4.15□□□□□ -1.75
DDX41-215ENST00000512431 RPS28P62857 69 aaKnown RBP4.15□□□□□ -1.75
DDX41-215ENST00000512431 KRTAP4-7Q9BYR0 210 aa4.15□□□□□ -1.75
DDX41-215ENST00000512431 PSPHP1O15172 72 aa4.14□□□□□ -1.75
DDX41-215ENST00000512431 LCE3AQ5TA76 89 aa4.14□□□□□ -1.75
DDX41-215ENST00000512431 KRTAP5-5Q701N2 237 aaPredicted RBP4.14□□□□□ -1.75
DDX41-215ENST00000512431 V9GYY9 64 aa4.1□□□□□ -1.75
DDX41-215ENST00000512431 KRTAP4-11Q9BYQ6 195 aa4.09□□□□□ -1.75
DDX41-215ENST00000512431 UQCR11O14957 56 aa4.08□□□□□ -1.76
DDX41-215ENST00000512431 TNP1P09430 55 aa4.07□□□□□ -1.76
DDX41-215ENST00000512431 SYNE1Q8NF91 8797 aaKnown RBP4.04□□□□□ -1.76
DDX41-215ENST00000512431 AHNAKQ09666 5890 aaKnown RBP4.04□□□□□ -1.76
DDX41-215ENST00000512431 MIR22HGQ0VDD5 57 aa4.03□□□□□ -1.76
DDX41-215ENST00000512431 MUC5ACP98088 5654 aa4□□□□□ -1.77
DDX41-215ENST00000512431 KRTAP12-3P60328 96 aa4□□□□□ -1.77
DDX41-215ENST00000512431 LOC100996750A0A140TA64 210 aa3.96□□□□□ -1.78
DDX41-215ENST00000512431 A6NED7 52 aa3.96□□□□□ -1.78
DDX41-215ENST00000512431 KRTAP5-8O75690 187 aa3.96□□□□□ -1.78
DDX41-215ENST00000512431 MUC5BQ9HC84 5762 aaPredicted RBP3.95□□□□□ -1.78
DDX41-215ENST00000512431 KRTAP5-2Q701N4 177 aa3.89□□□□□ -1.79
DDX41-215ENST00000512431 KRTAP9-9Q9BYP9 154 aa3.88□□□□□ -1.79
DDX41-215ENST00000512431 CDC42SE1Q9NRR8 79 aa3.86□□□□□ -1.79
DDX41-215ENST00000512431 OBSCNQ5VST9 7968 aa3.84□□□□□ -1.8
DDX41-215ENST00000512431 K7ERS5 55 aa3.81□□□□□ -1.8
DDX41-215ENST00000512431 KRTAP19-4Q3LI73 84 aa3.77□□□□□ -1.81
DDX41-215ENST00000512431 MT1AP04731 61 aa3.74□□□□□ -1.81
DDX41-215ENST00000512431 KRTAP25-1Q3LHN0 102 aa3.73□□□□□ -1.81
DDX41-215ENST00000512431 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
DDX41-215ENST00000512431 ROMO1P60602 79 aa3.7□□□□□ -1.82
DDX41-215ENST00000512431 BRK1Q8WUW1 75 aa3.7□□□□□ -1.82
DDX41-215ENST00000512431 KRTAP6-2Q3LI66 62 aa3.68□□□□□ -1.82
DDX41-215ENST00000512431 KRTAP9-4Q9BYQ2 154 aa3.68□□□□□ -1.82
DDX41-215ENST00000512431 LCE3CQ5T5A8 94 aa3.63□□□□□ -1.83
DDX41-215ENST00000512431 KRTAP23-1A1A580 65 aa3.59□□□□□ -1.83
DDX41-215ENST00000512431 KRTAP15-1Q3LI76 137 aa3.58□□□□□ -1.84
DDX41-215ENST00000512431 KRTAP5-1Q6L8H4 278 aa3.58□□□□□ -1.84
DDX41-215ENST00000512431 MT3P25713 68 aa3.48□□□□□ -1.85
DDX41-215ENST00000512431 PMAIP1Q13794 54 aa3.45□□□□□ -1.86
DDX41-215ENST00000512431 PRO0628Q9UI54 55 aa3.43□□□□□ -1.86
DDX41-215ENST00000512431 KRTAP9-6A8MVA2 160 aa3.37□□□□□ -1.87
DDX41-215ENST00000512431 PRAC1Q96KF2 57 aa3.37□□□□□ -1.87
DDX41-215ENST00000512431 LCE1EQ5T753 118 aa3.29□□□□□ -1.88
DDX41-215ENST00000512431 KTN1-AS1Q86SY8 53 aa3.23□□□□□ -1.89
DDX41-215ENST00000512431 LCE1BQ5T7P3 118 aa3.16□□□□□ -1.9
DDX41-215ENST00000512431 KRTAP4-2Q9BYR5 136 aa3.11□□□□□ -1.91
DDX41-215ENST00000512431 SVIPQ8NHG7 77 aa3.09□□□□□ -1.91
DDX41-215ENST00000512431 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
DDX41-215ENST00000512431 KRTAP4-12Q9BQ66 201 aa3.02□□□□□ -1.93
DDX41-215ENST00000512431 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
DDX41-215ENST00000512431 KRTAP5-11Q6L8G4 156 aa2.85□□□□□ -1.95
DDX41-215ENST00000512431 PHGR1C9JFL3 82 aa2.82□□□□□ -1.96
DDX41-215ENST00000512431 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
DDX41-215ENST00000512431 LUZP6Q538Z0 58 aa2.64□□□□□ -1.99
DDX41-215ENST00000512431 LCE3DQ9BYE3 92 aa2.54□□□□□ -2
DDX41-215ENST00000512431 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
DDX41-215ENST00000512431 NDUFAF8A1L188 74 aa2.45□□□□□ -2.02
DDX41-215ENST00000512431 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
DDX41-215ENST00000512431 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
DDX41-215ENST00000512431 KRTAP4-4Q9BYR3 166 aa2.34□□□□□ -2.03
DDX41-215ENST00000512431 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
DDX41-215ENST00000512431 H3BS24 57 aa2.11□□□□□ -2.07
DDX41-215ENST00000512431 A0A0A0MQY5 61 aa2.08□□□□□ -2.08
DDX41-215ENST00000512431 INE1O15225 51 aa1.96□□□□□ -2.1
DDX41-215ENST00000512431 PRM1P04553 51 aa1.94□□□□□ -2.1
DDX41-215ENST00000512431 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 116.2 ms