RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 VPS13BQ7Z7G8 4022 aa1.39□□□□□ -2.19
CHD1-208ENST00000512392 CRCT1Q9UGL9 99 aa1.39□□□□□ -2.19
CHD1-208ENST00000512392 TNP1P09430 55 aa1.38□□□□□ -2.19
CHD1-208ENST00000512392 PKHD1L1Q86WI1 4243 aa1.36□□□□□ -2.19
CHD1-208ENST00000512392 FAT1Q14517 4588 aa1.36□□□□□ -2.19
CHD1-208ENST00000512392 DYNC1H1Q14204 4646 aaKnown RBP1.35□□□□□ -2.19
CHD1-208ENST00000512392 APOBP04114 4563 aaKnown RBP1.35□□□□□ -2.19
CHD1-208ENST00000512392 C9orf92A6NGG3 77 aa1.34□□□□□ -2.19
CHD1-208ENST00000512392 HSPG2P98160 4391 aa1.32□□□□□ -2.2
CHD1-208ENST00000512392 RYR2Q92736 4967 aa1.31□□□□□ -2.2
CHD1-208ENST00000512392 KMT2CQ8NEZ4 4911 aaKnown RBP1.31□□□□□ -2.2
CHD1-208ENST00000512392 SYNE1Q8NF91 8797 aaKnown RBP1.3□□□□□ -2.2
CHD1-208ENST00000512392 FAT3Q8TDW7 4589 aa1.3□□□□□ -2.2
CHD1-208ENST00000512392 LRP1Q07954 4544 aaKnown RBP1.3□□□□□ -2.2
CHD1-208ENST00000512392 KRTAP4-1Q9BYQ7 146 aa1.27□□□□□ -2.21
CHD1-208ENST00000512392 RYR3Q15413 4870 aa1.27□□□□□ -2.21
CHD1-208ENST00000512392 LPAP08519 4548 aa1.24□□□□□ -2.21
CHD1-208ENST00000512392 RYR1P21817 5038 aa1.24□□□□□ -2.21
CHD1-208ENST00000512392 SMR3BP02814 79 aaPredicted RBP1.23□□□□□ -2.21
CHD1-208ENST00000512392 KIAA1109Q2LD37 5005 aa1.23□□□□□ -2.21
CHD1-208ENST00000512392 LRP2P98164 4655 aa1.22□□□□□ -2.21
CHD1-208ENST00000512392 EPPK1P58107 5090 aaKnown RBP1.21□□□□□ -2.22
CHD1-208ENST00000512392 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
CHD1-208ENST00000512392 ABCA13Q86UQ4 5058 aa1.18□□□□□ -2.22
CHD1-208ENST00000512392 MUC17Q685J3 4493 aa1.18□□□□□ -2.22
CHD1-208ENST00000512392 SPRR2DP22532 72 aa1.17□□□□□ -2.22
CHD1-208ENST00000512392 RPS29P62273 56 aaKnown RBP1.17□□□□□ -2.22
CHD1-208ENST00000512392 FCGBPQ9Y6R7 5405 aaPredicted RBP1.17□□□□□ -2.22
CHD1-208ENST00000512392 MUC5ACP98088 5654 aa1.17□□□□□ -2.22
CHD1-208ENST00000512392 HERC2O95714 4834 aa1.13□□□□□ -2.23
CHD1-208ENST00000512392 MT1HL1P0DM35 61 aa1.13□□□□□ -2.23
CHD1-208ENST00000512392 KRTAP8-1Q8IUC2 63 aa1.12□□□□□ -2.23
CHD1-208ENST00000512392 SYNE2Q8WXH0 6885 aaKnown RBP1.12□□□□□ -2.23
CHD1-208ENST00000512392 FLGP20930 4061 aaPredicted RBP1.11□□□□□ -2.23
CHD1-208ENST00000512392 BIRC6Q9NR09 4857 aa1.11□□□□□ -2.23
CHD1-208ENST00000512392 HERC1Q15751 4861 aa1.1□□□□□ -2.23
CHD1-208ENST00000512392 PCLOQ9Y6V0 5065 aa1.09□□□□□ -2.23
CHD1-208ENST00000512392 MUC2Q02817 5179 aa1.08□□□□□ -2.24
CHD1-208ENST00000512392 FAT4Q6V0I7 4981 aa1.08□□□□□ -2.24
CHD1-208ENST00000512392 KRTAP6-2Q3LI66 62 aa1.08□□□□□ -2.24
CHD1-208ENST00000512392 HMCN2Q8NDA2 5059 aa1.07□□□□□ -2.24
CHD1-208ENST00000512392 UBR4Q5T4S7 5183 aa1.05□□□□□ -2.24
CHD1-208ENST00000512392 SPRR2BP35325 72 aa1.05□□□□□ -2.24
CHD1-208ENST00000512392 KRTAP19-2Q3LHN2 52 aa1.05□□□□□ -2.24
CHD1-208ENST00000512392 RNF213Q63HN8 5207 aa1.01□□□□□ -2.25
CHD1-208ENST00000512392 MT1AP04731 61 aa0.97□□□□□ -2.25
CHD1-208ENST00000512392 KRTAP19-5Q3LI72 72 aa0.96□□□□□ -2.26
CHD1-208ENST00000512392 MT1FP04733 61 aa0.94□□□□□ -2.26
CHD1-208ENST00000512392 SPRR2AP35326 72 aa0.94□□□□□ -2.26
CHD1-208ENST00000512392 MT1HP80294 61 aa0.94□□□□□ -2.26
CHD1-208ENST00000512392 MT2AP02795 61 aa0.94□□□□□ -2.26
CHD1-208ENST00000512392 SPRR2GQ9BYE4 73 aa0.93□□□□□ -2.26
CHD1-208ENST00000512392 KMT2DO14686 5537 aa0.92□□□□□ -2.26
CHD1-208ENST00000512392 USH2AO75445 5202 aa0.92□□□□□ -2.26
CHD1-208ENST00000512392 MT1BP07438 61 aa0.91□□□□□ -2.26
CHD1-208ENST00000512392 FSIP2Q5CZC0 6907 aa0.91□□□□□ -2.26
CHD1-208ENST00000512392 MT1XP80297 61 aa0.9□□□□□ -2.26
CHD1-208ENST00000512392 KRTAP19-8Q3LI54 63 aa0.9□□□□□ -2.27
CHD1-208ENST00000512392 NEBP20929 6669 aa0.88□□□□□ -2.27
CHD1-208ENST00000512392 SSPOA2VEC9 5147 aa0.87□□□□□ -2.27
CHD1-208ENST00000512392 SPRR2FQ96RM1 72 aa0.85□□□□□ -2.27
CHD1-208ENST00000512392 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
CHD1-208ENST00000512392 SPRR2EP22531 72 aa0.84□□□□□ -2.28
CHD1-208ENST00000512392 KRTAP5-10Q6L8G5 202 aa0.84□□□□□ -2.28
CHD1-208ENST00000512392 MUC12Q9UKN1 5478 aa0.81□□□□□ -2.28
CHD1-208ENST00000512392 KRTAP19-7Q3SYF9 63 aa0.8□□□□□ -2.28
CHD1-208ENST00000512392 KRTAP20-1Q3LI63 56 aa0.78□□□□□ -2.28
CHD1-208ENST00000512392 MT1EP04732 61 aa0.77□□□□□ -2.29
CHD1-208ENST00000512392 MT1LQ93083 61 aa0.77□□□□□ -2.29
CHD1-208ENST00000512392 DSTQ03001 7570 aaKnown RBP0.75□□□□□ -2.29
CHD1-208ENST00000512392 KRTAP19-6Q3LI70 58 aa0.74□□□□□ -2.29
CHD1-208ENST00000512392 MT1GP13640 62 aa0.73□□□□□ -2.29
CHD1-208ENST00000512392 MT1MQ8N339 61 aa0.73□□□□□ -2.29
CHD1-208ENST00000512392 MDN1Q9NU22 5596 aa0.7□□□□□ -2.3
CHD1-208ENST00000512392 KRTAP6-1Q3LI64 71 aa0.67□□□□□ -2.3
CHD1-208ENST00000512392 PHGR1C9JFL3 82 aa0.63□□□□□ -2.31
CHD1-208ENST00000512392 MT4P47944 62 aa0.55□□□□□ -2.32
CHD1-208ENST00000512392 KRTAP20-2Q3LI61 65 aa0.53□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 124.1 ms