RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 GPR98Q8WXG9 6306 aa3.7□□□□□ -1.82
UBE2D3-227ENST00000508818 H7BZZ5 65 aa3.69□□□□□ -1.82
UBE2D3-227ENST00000508818 KRTAP19-5Q3LI72 72 aa3.69□□□□□ -1.82
UBE2D3-227ENST00000508818 DSTQ03001 7570 aaKnown RBP3.69□□□□□ -1.82
UBE2D3-227ENST00000508818 CYSTM1Q9H1C7 97 aa3.68□□□□□ -1.82
UBE2D3-227ENST00000508818 MT1GP13640 62 aa3.67□□□□□ -1.82
UBE2D3-227ENST00000508818 PP632Q6XCG6 107 aa3.67□□□□□ -1.82
UBE2D3-227ENST00000508818 A8MU10 97 aa3.63□□□□□ -1.83
UBE2D3-227ENST00000508818 TNP1P09430 55 aa3.61□□□□□ -1.83
UBE2D3-227ENST00000508818 ANAPC13Q9BS18 74 aa3.6□□□□□ -1.83
UBE2D3-227ENST00000508818 PRR15LQ9BU68 103 aa3.6□□□□□ -1.83
UBE2D3-227ENST00000508818 PCP4P48539 62 aa3.59□□□□□ -1.83
UBE2D3-227ENST00000508818 MT1MQ8N339 61 aa3.58□□□□□ -1.84
UBE2D3-227ENST00000508818 MT1LQ93083 61 aa3.57□□□□□ -1.84
UBE2D3-227ENST00000508818 LCE3AQ5TA76 89 aa3.56□□□□□ -1.84
UBE2D3-227ENST00000508818 C10orf95Q9H7T3 257 aa3.56□□□□□ -1.84
UBE2D3-227ENST00000508818 MT4P47944 62 aa3.54□□□□□ -1.84
UBE2D3-227ENST00000508818 ATP5EP56381 51 aaPredicted RBP3.52□□□□□ -1.85
UBE2D3-227ENST00000508818 CCDC179H3BU77 68 aa3.5□□□□□ -1.85
UBE2D3-227ENST00000508818 KRTAP4-3Q9BYR4 195 aa3.49□□□□□ -1.85
UBE2D3-227ENST00000508818 HMCN1Q96RW7 5635 aa3.47□□□□□ -1.85
UBE2D3-227ENST00000508818 LINC01558Q9Y6Z2 57 aa3.47□□□□□ -1.85
UBE2D3-227ENST00000508818 KRTAP12-3P60328 96 aa3.45□□□□□ -1.86
UBE2D3-227ENST00000508818 UQCR11O14957 56 aa3.44□□□□□ -1.86
UBE2D3-227ENST00000508818 KRTAP5-4Q6L8H1 288 aa3.43□□□□□ -1.86
UBE2D3-227ENST00000508818 TMEM258P61165 79 aa3.38□□□□□ -1.87
UBE2D3-227ENST00000508818 AHNAK2Q8IVF2 5795 aa3.38□□□□□ -1.87
UBE2D3-227ENST00000508818 K7ERS5 55 aa3.37□□□□□ -1.87
UBE2D3-227ENST00000508818 MIR22HGQ0VDD5 57 aa3.36□□□□□ -1.87
UBE2D3-227ENST00000508818 KRTAP25-1Q3LHN0 102 aa3.36□□□□□ -1.87
UBE2D3-227ENST00000508818 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
UBE2D3-227ENST00000508818 KRTAP5-10Q6L8G5 202 aa3.32□□□□□ -1.88
UBE2D3-227ENST00000508818 KRTAP9-6A8MVA2 160 aa3.28□□□□□ -1.88
UBE2D3-227ENST00000508818 KRTAP12-4P60329 112 aa3.28□□□□□ -1.88
UBE2D3-227ENST00000508818 KRTAP20-2Q3LI61 65 aa3.26□□□□□ -1.89
UBE2D3-227ENST00000508818 V9GYY9 64 aa3.26□□□□□ -1.89
UBE2D3-227ENST00000508818 SPRR5A0A1B0GTR4 108 aa3.25□□□□□ -1.89
UBE2D3-227ENST00000508818 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
UBE2D3-227ENST00000508818 PSPHP1O15172 72 aa3.24□□□□□ -1.89
UBE2D3-227ENST00000508818 RPS28P62857 69 aaKnown RBP3.22□□□□□ -1.89
UBE2D3-227ENST00000508818 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
UBE2D3-227ENST00000508818 KRTAP5-7Q6L8G8 165 aa3.21□□□□□ -1.9
UBE2D3-227ENST00000508818 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
UBE2D3-227ENST00000508818 A0A0A0MQY5 61 aa3.18□□□□□ -1.9
UBE2D3-227ENST00000508818 Q1T7F1 81 aa3.18□□□□□ -1.9
UBE2D3-227ENST00000508818 LCE3CQ5T5A8 94 aa3.16□□□□□ -1.9
UBE2D3-227ENST00000508818 SYNE1Q8NF91 8797 aaKnown RBP3.15□□□□□ -1.9
UBE2D3-227ENST00000508818 A6NED7 52 aa3.15□□□□□ -1.91
UBE2D3-227ENST00000508818 CDC42SE1Q9NRR8 79 aa3.14□□□□□ -1.91
UBE2D3-227ENST00000508818 ROMO1P60602 79 aa3.07□□□□□ -1.92
UBE2D3-227ENST00000508818 MT1AP04731 61 aa3.05□□□□□ -1.92
UBE2D3-227ENST00000508818 KRTAP6-1Q3LI64 71 aa3.02□□□□□ -1.93
UBE2D3-227ENST00000508818 KRTAP5-2Q701N4 177 aa2.98□□□□□ -1.93
UBE2D3-227ENST00000508818 BRK1Q8WUW1 75 aa2.96□□□□□ -1.94
UBE2D3-227ENST00000508818 SVIPQ8NHG7 77 aa2.95□□□□□ -1.94
UBE2D3-227ENST00000508818 OBSCNQ5VST9 7968 aa2.92□□□□□ -1.94
UBE2D3-227ENST00000508818 KRTAP6-2Q3LI66 62 aa2.92□□□□□ -1.94
UBE2D3-227ENST00000508818 PRO0628Q9UI54 55 aa2.91□□□□□ -1.94
UBE2D3-227ENST00000508818 NDUFAF8A1L188 74 aa2.89□□□□□ -1.95
UBE2D3-227ENST00000508818 KRTAP5-8O75690 187 aa2.88□□□□□ -1.95
UBE2D3-227ENST00000508818 AHNAKQ09666 5890 aaKnown RBP2.84□□□□□ -1.95
UBE2D3-227ENST00000508818 PMAIP1Q13794 54 aa2.81□□□□□ -1.96
UBE2D3-227ENST00000508818 MUC5ACP98088 5654 aa2.8□□□□□ -1.96
UBE2D3-227ENST00000508818 MUC5BQ9HC84 5762 aaPredicted RBP2.78□□□□□ -1.96
UBE2D3-227ENST00000508818 LCE3EQ5T5B0 92 aa2.74□□□□□ -1.97
UBE2D3-227ENST00000508818 KTN1-AS1Q86SY8 53 aa2.69□□□□□ -1.98
UBE2D3-227ENST00000508818 PRAC1Q96KF2 57 aa2.62□□□□□ -1.99
UBE2D3-227ENST00000508818 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
UBE2D3-227ENST00000508818 LCE1BQ5T7P3 118 aa2.49□□□□□ -2.01
UBE2D3-227ENST00000508818 LCE3DQ9BYE3 92 aa2.28□□□□□ -2.04
UBE2D3-227ENST00000508818 LUZP6Q538Z0 58 aa2.21□□□□□ -2.06
UBE2D3-227ENST00000508818 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
UBE2D3-227ENST00000508818 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
UBE2D3-227ENST00000508818 PHGR1C9JFL3 82 aa1.97□□□□□ -2.09
UBE2D3-227ENST00000508818 INE1O15225 51 aa1.79□□□□□ -2.12
UBE2D3-227ENST00000508818 PRM1P04553 51 aa1.55□□□□□ -2.16
UBE2D3-227ENST00000508818 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
UBE2D3-227ENST00000508818 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 2526.2 ms