RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 KRTAP13-4Q3LI77 160 aa3.25□□□□□ -1.89
PTPN20-216ENST00000506080 SPTSSBQ8NFR3 76 aa3.25□□□□□ -1.89
PTPN20-216ENST00000506080 SPRR5A0A1B0GTR4 108 aa3.23□□□□□ -1.89
PTPN20-216ENST00000506080 ACYP2P14621 99 aa3.23□□□□□ -1.89
PTPN20-216ENST00000506080 MT1LQ93083 61 aa3.23□□□□□ -1.89
PTPN20-216ENST00000506080 LINC00643Q86TS7 51 aa3.21□□□□□ -1.9
PTPN20-216ENST00000506080 LOC105371267A0A1B0GV96 52 aa3.19□□□□□ -1.9
PTPN20-216ENST00000506080 CHKB-CPT1BH3BT56 60 aa3.19□□□□□ -1.9
PTPN20-216ENST00000506080 KRTAP20-2Q3LI61 65 aa3.15□□□□□ -1.91
PTPN20-216ENST00000506080 PRAC1Q96KF2 57 aa3.14□□□□□ -1.91
PTPN20-216ENST00000506080 SCGB1A1P11684 91 aa3.13□□□□□ -1.91
PTPN20-216ENST00000506080 SPINT4Q6UDR6 99 aa3.11□□□□□ -1.91
PTPN20-216ENST00000506080 KRTAP5-2Q701N4 177 aa3.11□□□□□ -1.91
PTPN20-216ENST00000506080 C10orf95Q9H7T3 257 aa3.1□□□□□ -1.91
PTPN20-216ENST00000506080 SPATA8Q6RVD6 105 aa3.06□□□□□ -1.92
PTPN20-216ENST00000506080 PCP4L1A6NKN8 68 aa3.04□□□□□ -1.92
PTPN20-216ENST00000506080 SYNE1Q8NF91 8797 aaKnown RBP3.04□□□□□ -1.92
PTPN20-216ENST00000506080 KRTAP12-1P59990 96 aa3.03□□□□□ -1.92
PTPN20-216ENST00000506080 KRTAP12-4P60329 112 aa3.03□□□□□ -1.92
PTPN20-216ENST00000506080 KRTAP5-5Q701N2 237 aaPredicted RBP3.02□□□□□ -1.93
PTPN20-216ENST00000506080 A8MU10 97 aa3.02□□□□□ -1.93
PTPN20-216ENST00000506080 SNURFQ9Y675 71 aa2.99□□□□□ -1.93
PTPN20-216ENST00000506080 SERP1Q9Y6X1 66 aa2.98□□□□□ -1.93
PTPN20-216ENST00000506080 SEC61GP60059 68 aa2.97□□□□□ -1.93
PTPN20-216ENST00000506080 TNP1P09430 55 aa2.96□□□□□ -1.94
PTPN20-216ENST00000506080 A0A1B0GU33 70 aa2.95□□□□□ -1.94
PTPN20-216ENST00000506080 KRTAP12-3P60328 96 aa2.93□□□□□ -1.94
PTPN20-216ENST00000506080 SPANXA2-OT1Q8N9U9 137 aa2.93□□□□□ -1.94
PTPN20-216ENST00000506080 AHNAKQ09666 5890 aaKnown RBP2.93□□□□□ -1.94
PTPN20-216ENST00000506080 SMIM20Q8N5G0 67 aa2.93□□□□□ -1.94
PTPN20-216ENST00000506080 COA5Q86WW8 74 aa2.91□□□□□ -1.94
PTPN20-216ENST00000506080 MUC5ACP98088 5654 aa2.89□□□□□ -1.95
PTPN20-216ENST00000506080 J3QR89 54 aa2.89□□□□□ -1.95
PTPN20-216ENST00000506080 MUC5BQ9HC84 5762 aaPredicted RBP2.88□□□□□ -1.95
PTPN20-216ENST00000506080 SMIM26A0A096LP01 95 aa2.86□□□□□ -1.95
PTPN20-216ENST00000506080 KRTAP5-8O75690 187 aa2.86□□□□□ -1.95
PTPN20-216ENST00000506080 A0A1B0GV90 55 aa2.84□□□□□ -1.96
PTPN20-216ENST00000506080 LCE1CQ5T751 118 aa2.84□□□□□ -1.96
PTPN20-216ENST00000506080 LCE1BQ5T7P3 118 aa2.84□□□□□ -1.96
PTPN20-216ENST00000506080 A0A1B0GU69 56 aa2.76□□□□□ -1.97
PTPN20-216ENST00000506080 KRTAP6-1Q3LI64 71 aa2.76□□□□□ -1.97
PTPN20-216ENST00000506080 SERP2Q8N6R1 65 aa2.76□□□□□ -1.97
PTPN20-216ENST00000506080 MT1AP04731 61 aa2.74□□□□□ -1.97
PTPN20-216ENST00000506080 KRTAP6-2Q3LI66 62 aa2.69□□□□□ -1.98
PTPN20-216ENST00000506080 KRTAP25-1Q3LHN0 102 aa2.68□□□□□ -1.98
PTPN20-216ENST00000506080 K7ERU9 68 aa2.63□□□□□ -1.99
PTPN20-216ENST00000506080 H7BZZ5 65 aa2.62□□□□□ -1.99
PTPN20-216ENST00000506080 LCE3DQ9BYE3 92 aa2.62□□□□□ -1.99
PTPN20-216ENST00000506080 COX7CP15954 63 aa2.58□□□□□ -2
PTPN20-216ENST00000506080 PRR15LQ9BU68 103 aa2.58□□□□□ -2
PTPN20-216ENST00000506080 UQCR11O14957 56 aa2.49□□□□□ -2.01
PTPN20-216ENST00000506080 LINC01558Q9Y6Z2 57 aa2.49□□□□□ -2.01
PTPN20-216ENST00000506080 K7ERS5 55 aa2.42□□□□□ -2.02
PTPN20-216ENST00000506080 MIR22HGQ0VDD5 57 aa2.42□□□□□ -2.02
PTPN20-216ENST00000506080 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
PTPN20-216ENST00000506080 ATP5EP56381 51 aaPredicted RBP2.33□□□□□ -2.04
PTPN20-216ENST00000506080 RPS28P62857 69 aaKnown RBP2.33□□□□□ -2.04
PTPN20-216ENST00000506080 ANAPC13Q9BS18 74 aa2.31□□□□□ -2.04
PTPN20-216ENST00000506080 CCDC179H3BU77 68 aa2.3□□□□□ -2.04
PTPN20-216ENST00000506080 CDC42SE1Q9NRR8 79 aa2.25□□□□□ -2.05
PTPN20-216ENST00000506080 Q1T7F1 81 aa2.22□□□□□ -2.05
PTPN20-216ENST00000506080 PSPHP1O15172 72 aa2.21□□□□□ -2.06
PTPN20-216ENST00000506080 ROMO1P60602 79 aa2.19□□□□□ -2.06
PTPN20-216ENST00000506080 TMEM258P61165 79 aa2.16□□□□□ -2.06
PTPN20-216ENST00000506080 A6NED7 52 aa2.1□□□□□ -2.07
PTPN20-216ENST00000506080 V9GYY9 64 aa2.1□□□□□ -2.07
PTPN20-216ENST00000506080 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
PTPN20-216ENST00000506080 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
PTPN20-216ENST00000506080 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
PTPN20-216ENST00000506080 BRK1Q8WUW1 75 aa1.42□□□□□ -2.18
PTPN20-216ENST00000506080 PMAIP1Q13794 54 aa1.3□□□□□ -2.2
PTPN20-216ENST00000506080 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
PTPN20-216ENST00000506080 LUZP6Q538Z0 58 aa1.19□□□□□ -2.22
PTPN20-216ENST00000506080 PRM1P04553 51 aa1.12□□□□□ -2.23
PTPN20-216ENST00000506080 KTN1-AS1Q86SY8 53 aa0.92□□□□□ -2.26
PTPN20-216ENST00000506080 PRO0628Q9UI54 55 aa0.9□□□□□ -2.26
PTPN20-216ENST00000506080 INE1O15225 51 aa0.42□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 185.8 ms