RNA–Protein interactions for RNA: ENST00000498644.5

MTA1-216, Transcript of metastasis associated 1, humanhuman

TSL 2

Gene MTA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-216ENST00000498644 LINC01558Q9Y6Z2 57 aa5.86□□□□□ -1.47
MTA1-216ENST00000498644 KRTAP4-3Q9BYR4 195 aa5.8□□□□□ -1.48
MTA1-216ENST00000498644 MT4P47944 62 aa5.79□□□□□ -1.48
MTA1-216ENST00000498644 HMCN1Q96RW7 5635 aa5.78□□□□□ -1.48
MTA1-216ENST00000498644 KRTAP5-4Q6L8H1 288 aa5.76□□□□□ -1.49
MTA1-216ENST00000498644 UQCR11O14957 56 aa5.75□□□□□ -1.49
MTA1-216ENST00000498644 KRTAP12-3P60328 96 aa5.73□□□□□ -1.49
MTA1-216ENST00000498644 TMEM258P61165 79 aa5.71□□□□□ -1.5
MTA1-216ENST00000498644 KRTAP4-7Q9BYR0 210 aa5.65□□□□□ -1.5
MTA1-216ENST00000498644 KRTAP4-6Q9BYQ5 205 aa5.62□□□□□ -1.51
MTA1-216ENST00000498644 KRTAP25-1Q3LHN0 102 aa5.6□□□□□ -1.51
MTA1-216ENST00000498644 MIR22HGQ0VDD5 57 aa5.59□□□□□ -1.51
MTA1-216ENST00000498644 AHNAK2Q8IVF2 5795 aa5.54□□□□□ -1.52
MTA1-216ENST00000498644 K7ERS5 55 aa5.52□□□□□ -1.53
MTA1-216ENST00000498644 KRTAP5-10Q6L8G5 202 aa5.5□□□□□ -1.53
MTA1-216ENST00000498644 KRTAP5-5Q701N2 237 aaPredicted RBP5.48□□□□□ -1.53
MTA1-216ENST00000498644 KRTAP19-4Q3LI73 84 aa5.47□□□□□ -1.53
MTA1-216ENST00000498644 V9GYY9 64 aa5.46□□□□□ -1.54
MTA1-216ENST00000498644 KRTAP20-2Q3LI61 65 aa5.42□□□□□ -1.54
MTA1-216ENST00000498644 SPRR5A0A1B0GTR4 108 aa5.41□□□□□ -1.54
MTA1-216ENST00000498644 KRTAP23-1A1A580 65 aa5.41□□□□□ -1.54
MTA1-216ENST00000498644 PSPHP1O15172 72 aa5.41□□□□□ -1.54
MTA1-216ENST00000498644 Q1T7F1 81 aa5.4□□□□□ -1.54
MTA1-216ENST00000498644 KRTAP12-4P60329 112 aa5.38□□□□□ -1.55
MTA1-216ENST00000498644 KRTAP5-3Q6L8H2 238 aa5.36□□□□□ -1.55
MTA1-216ENST00000498644 LOC100996750A0A140TA64 210 aa5.35□□□□□ -1.55
MTA1-216ENST00000498644 KRTAP15-1Q3LI76 137 aa5.33□□□□□ -1.56
MTA1-216ENST00000498644 KRTAP5-7Q6L8G8 165 aa5.31□□□□□ -1.56
MTA1-216ENST00000498644 LCE3CQ5T5A8 94 aa5.28□□□□□ -1.56
MTA1-216ENST00000498644 SYNE1Q8NF91 8797 aaKnown RBP5.23□□□□□ -1.57
MTA1-216ENST00000498644 A6NED7 52 aa5.23□□□□□ -1.57
MTA1-216ENST00000498644 CDC42SE1Q9NRR8 79 aa5.2□□□□□ -1.58
MTA1-216ENST00000498644 ROMO1P60602 79 aa5.11□□□□□ -1.59
MTA1-216ENST00000498644 MT1AP04731 61 aa5.08□□□□□ -1.6
MTA1-216ENST00000498644 RPS28P62857 69 aaKnown RBP5.08□□□□□ -1.6
MTA1-216ENST00000498644 KRTAP6-1Q3LI64 71 aa5.04□□□□□ -1.6
MTA1-216ENST00000498644 KRTAP5-2Q701N4 177 aa5.02□□□□□ -1.61
MTA1-216ENST00000498644 KRTAP4-11Q9BYQ6 195 aa4.98□□□□□ -1.61
MTA1-216ENST00000498644 KRTAP9-6A8MVA2 160 aa4.96□□□□□ -1.62
MTA1-216ENST00000498644 KRTAP9-4Q9BYQ2 154 aa4.94□□□□□ -1.62
MTA1-216ENST00000498644 PCP4P48539 62 aa4.93□□□□□ -1.62
MTA1-216ENST00000498644 KRTAP6-2Q3LI66 62 aa4.84□□□□□ -1.63
MTA1-216ENST00000498644 KRTAP5-8O75690 187 aa4.8□□□□□ -1.64
MTA1-216ENST00000498644 OBSCNQ5VST9 7968 aa4.75□□□□□ -1.65
MTA1-216ENST00000498644 MT3P25713 68 aa4.66□□□□□ -1.66
MTA1-216ENST00000498644 MUC5BQ9HC84 5762 aaPredicted RBP4.61□□□□□ -1.67
MTA1-216ENST00000498644 MUC5ACP98088 5654 aa4.6□□□□□ -1.67
MTA1-216ENST00000498644 KRTAP9-9Q9BYP9 154 aa4.58□□□□□ -1.68
MTA1-216ENST00000498644 AHNAKQ09666 5890 aaKnown RBP4.56□□□□□ -1.68
MTA1-216ENST00000498644 KRTAP5-1Q6L8H4 278 aa4.51□□□□□ -1.69
MTA1-216ENST00000498644 BRK1Q8WUW1 75 aa4.34□□□□□ -1.71
MTA1-216ENST00000498644 LCE1EQ5T753 118 aa4.33□□□□□ -1.72
MTA1-216ENST00000498644 PMAIP1Q13794 54 aa4.09□□□□□ -1.75
MTA1-216ENST00000498644 KRTAP4-2Q9BYR5 136 aa4.05□□□□□ -1.76
MTA1-216ENST00000498644 LCE1BQ5T7P3 118 aa4.03□□□□□ -1.76
MTA1-216ENST00000498644 LCE1CQ5T751 118 aa4.01□□□□□ -1.77
MTA1-216ENST00000498644 PRAC1Q96KF2 57 aa3.94□□□□□ -1.78
MTA1-216ENST00000498644 PRO0628Q9UI54 55 aa3.93□□□□□ -1.78
MTA1-216ENST00000498644 LCE3DQ9BYE3 92 aa3.79□□□□□ -1.8
MTA1-216ENST00000498644 KTN1-AS1Q86SY8 53 aa3.69□□□□□ -1.82
MTA1-216ENST00000498644 KRTAP4-12Q9BQ66 201 aa3.69□□□□□ -1.82
MTA1-216ENST00000498644 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.64□□□□□ -1.83
MTA1-216ENST00000498644 KRTAP5-11Q6L8G4 156 aa3.62□□□□□ -1.83
MTA1-216ENST00000498644 LCE1FQ5T754 118 aa3.57□□□□□ -1.84
MTA1-216ENST00000498644 LCE3EQ5T5B0 92 aa3.55□□□□□ -1.84
MTA1-216ENST00000498644 SVIPQ8NHG7 77 aa3.49□□□□□ -1.85
MTA1-216ENST00000498644 LUZP6Q538Z0 58 aa3.41□□□□□ -1.86
MTA1-216ENST00000498644 KRTAP21-2Q3LI59 83 aa3.33□□□□□ -1.88
MTA1-216ENST00000498644 PHGR1C9JFL3 82 aa3.2□□□□□ -1.9
MTA1-216ENST00000498644 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
MTA1-216ENST00000498644 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.95
MTA1-216ENST00000498644 NDUFAF8A1L188 74 aa2.76□□□□□ -1.97
MTA1-216ENST00000498644 PRM1P04553 51 aa2.59□□□□□ -1.99
MTA1-216ENST00000498644 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
MTA1-216ENST00000498644 A0A0A0MQY5 61 aa2.42□□□□□ -2.02
MTA1-216ENST00000498644 INE1O15225 51 aa2.35□□□□□ -2.03
MTA1-216ENST00000498644 MUC16Q8WXI7 14507 aa2.06□□□□□ -2.08
MTA1-216ENST00000498644 H3BS24 57 aa1.73□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 72.3 ms