RNA–Protein interactions for RNA: ENST00000498367.1

PDCD4-211, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 975 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-211ENST00000498367 IGSF10Q6WRI0 2623 aa1.39□□□□□ -2.19
PDCD4-211ENST00000498367 FAT1Q14517 4588 aa1.37□□□□□ -2.19
PDCD4-211ENST00000498367 DNAH17Q9UFH2 4485 aa1.36□□□□□ -2.19
PDCD4-211ENST00000498367 ASPMQ8IZT6 3477 aa1.36□□□□□ -2.19
PDCD4-211ENST00000498367 UBR4Q5T4S7 5183 aa1.36□□□□□ -2.19
PDCD4-211ENST00000498367 STAB2Q8WWQ8 2551 aa1.35□□□□□ -2.19
PDCD4-211ENST00000498367 EP400Q96L91 3159 aa1.33□□□□□ -2.2
PDCD4-211ENST00000498367 DNAH5Q8TE73 4624 aa1.32□□□□□ -2.2
PDCD4-211ENST00000498367 MT1EP04732 61 aa1.32□□□□□ -2.2
PDCD4-211ENST00000498367 TLN1Q9Y490 2541 aaKnown RBP1.31□□□□□ -2.2
PDCD4-211ENST00000498367 PCLOQ9Y6V0 5065 aa1.29□□□□□ -2.2
PDCD4-211ENST00000498367 EYSQ5T1H1 3165 aa1.28□□□□□ -2.21
PDCD4-211ENST00000498367 LRP1BQ9NZR2 4599 aa1.26□□□□□ -2.21
PDCD4-211ENST00000498367 MYO15AQ9UKN7 3530 aa1.26□□□□□ -2.21
PDCD4-211ENST00000498367 VCANP13611 3396 aa1.26□□□□□ -2.21
PDCD4-211ENST00000498367 KIAA1109Q2LD37 5005 aa1.24□□□□□ -2.21
PDCD4-211ENST00000498367 MT1HP80294 61 aa1.24□□□□□ -2.21
PDCD4-211ENST00000498367 MT1LQ93083 61 aa1.24□□□□□ -2.21
PDCD4-211ENST00000498367 DYNC1H1Q14204 4646 aaKnown RBP1.22□□□□□ -2.21
PDCD4-211ENST00000498367 MUC17Q685J3 4493 aa1.22□□□□□ -2.21
PDCD4-211ENST00000498367 DNHD1Q96M86 4753 aa1.21□□□□□ -2.21
PDCD4-211ENST00000498367 MUC2Q02817 5179 aa1.19□□□□□ -2.22
PDCD4-211ENST00000498367 SPRR2GQ9BYE4 73 aa1.19□□□□□ -2.22
PDCD4-211ENST00000498367 UNC80Q8N2C7 3258 aa1.19□□□□□ -2.22
PDCD4-211ENST00000498367 RYR3Q15413 4870 aa1.17□□□□□ -2.22
PDCD4-211ENST00000498367 RYR1P21817 5038 aa1.16□□□□□ -2.22
PDCD4-211ENST00000498367 MYO9AB2RTY4 2548 aa1.15□□□□□ -2.23
PDCD4-211ENST00000498367 GPR98Q8WXG9 6306 aa1.13□□□□□ -2.23
PDCD4-211ENST00000498367 BIRC6Q9NR09 4857 aa1.12□□□□□ -2.23
PDCD4-211ENST00000498367 BRCA2P51587 3418 aa1.11□□□□□ -2.23
PDCD4-211ENST00000498367 CENPFP49454 3210 aa1.11□□□□□ -2.23
PDCD4-211ENST00000498367 WDFY3Q8IZQ1 3526 aa1.09□□□□□ -2.24
PDCD4-211ENST00000498367 HYDINQ4G0P3 5121 aa1.07□□□□□ -2.24
PDCD4-211ENST00000498367 STARD9Q9P2P6 4700 aa1.06□□□□□ -2.24
PDCD4-211ENST00000498367 EPPK1P58107 5090 aaKnown RBP1.05□□□□□ -2.24
PDCD4-211ENST00000498367 KMT2CQ8NEZ4 4911 aaKnown RBP1.05□□□□□ -2.24
PDCD4-211ENST00000498367 MT1XP80297 61 aa1.03□□□□□ -2.24
PDCD4-211ENST00000498367 RYR2Q92736 4967 aa1.01□□□□□ -2.25
PDCD4-211ENST00000498367 ABCA13Q86UQ4 5058 aa1.01□□□□□ -2.25
PDCD4-211ENST00000498367 HERC1Q15751 4861 aa1.01□□□□□ -2.25
PDCD4-211ENST00000498367 DNAH14Q0VDD8 3507 aa1□□□□□ -2.25
PDCD4-211ENST00000498367 KRTAP5-10Q6L8G5 202 aa0.99□□□□□ -2.25
PDCD4-211ENST00000498367 MACF1Q9UPN3 7388 aaKnown RBP0.97□□□□□ -2.25
PDCD4-211ENST00000498367 AHNAK2Q8IVF2 5795 aa0.96□□□□□ -2.26
PDCD4-211ENST00000498367 LRP2P98164 4655 aa0.96□□□□□ -2.26
PDCD4-211ENST00000498367 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
PDCD4-211ENST00000498367 HERC2O95714 4834 aa0.95□□□□□ -2.26
PDCD4-211ENST00000498367 CDH23Q9H251 3354 aa0.94□□□□□ -2.26
PDCD4-211ENST00000498367 KRTAP19-8Q3LI54 63 aa0.94□□□□□ -2.26
PDCD4-211ENST00000498367 SYNE2Q8WXH0 6885 aaKnown RBP0.94□□□□□ -2.26
PDCD4-211ENST00000498367 FAT4Q6V0I7 4981 aa0.93□□□□□ -2.26
PDCD4-211ENST00000498367 HMCN2Q8NDA2 5059 aa0.93□□□□□ -2.26
PDCD4-211ENST00000498367 NEBP20929 6669 aa0.93□□□□□ -2.26
PDCD4-211ENST00000498367 FSIP2Q5CZC0 6907 aa0.92□□□□□ -2.26
PDCD4-211ENST00000498367 AHNAKQ09666 5890 aaKnown RBP0.9□□□□□ -2.27
PDCD4-211ENST00000498367 SSPOA2VEC9 5147 aa0.86□□□□□ -2.27
PDCD4-211ENST00000498367 MUC5BQ9HC84 5762 aaPredicted RBP0.85□□□□□ -2.27
PDCD4-211ENST00000498367 KRTAP20-1Q3LI63 56 aa0.84□□□□□ -2.27
PDCD4-211ENST00000498367 DSTQ03001 7570 aaKnown RBP0.82□□□□□ -2.28
PDCD4-211ENST00000498367 MT1GP13640 62 aa0.81□□□□□ -2.28
PDCD4-211ENST00000498367 MDN1Q9NU22 5596 aa0.81□□□□□ -2.28
PDCD4-211ENST00000498367 KRTAP19-7Q3SYF9 63 aa0.8□□□□□ -2.28
PDCD4-211ENST00000498367 KMT2DO14686 5537 aa0.8□□□□□ -2.28
PDCD4-211ENST00000498367 RNF213Q63HN8 5207 aa0.79□□□□□ -2.28
PDCD4-211ENST00000498367 MT2AP02795 61 aa0.78□□□□□ -2.28
PDCD4-211ENST00000498367 MUC5ACP98088 5654 aa0.77□□□□□ -2.29
PDCD4-211ENST00000498367 MT1MQ8N339 61 aa0.77□□□□□ -2.29
PDCD4-211ENST00000498367 PHGR1C9JFL3 82 aa0.7□□□□□ -2.3
PDCD4-211ENST00000498367 MUC12Q9UKN1 5478 aa0.7□□□□□ -2.3
PDCD4-211ENST00000498367 MT1HL1P0DM35 61 aa0.69□□□□□ -2.3
PDCD4-211ENST00000498367 KRTAP6-1Q3LI64 71 aa0.69□□□□□ -2.3
PDCD4-211ENST00000498367 USH2AO75445 5202 aa0.67□□□□□ -2.3
PDCD4-211ENST00000498367 MT1BP07438 61 aa0.64□□□□□ -2.31
PDCD4-211ENST00000498367 KRTAP19-2Q3LHN2 52 aa0.64□□□□□ -2.31
PDCD4-211ENST00000498367 MT1FP04733 61 aa0.51□□□□□ -2.33
PDCD4-211ENST00000498367 KRTAP19-6Q3LI70 58 aa0.41□□□□□ -2.34
PDCD4-211ENST00000498367 MT4P47944 62 aa0.36□□□□□ -2.35
PDCD4-211ENST00000498367 KRTAP20-2Q3LI61 65 aa0.18□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 10.8 ms