RNA–Protein interactions for RNA: ENST00000497469.5

RNF220-218, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-218ENST00000497469 ANAPC13Q9BS18 74 aa4.88□□□□□ -1.63
RNF220-218ENST00000497469 SEC61GP60059 68 aa4.87□□□□□ -1.63
RNF220-218ENST00000497469 KRTAP19-5Q3LI72 72 aa4.87□□□□□ -1.63
RNF220-218ENST00000497469 SPATA8Q6RVD6 105 aa4.87□□□□□ -1.63
RNF220-218ENST00000497469 SERP1Q9Y6X1 66 aa4.87□□□□□ -1.63
RNF220-218ENST00000497469 A0A0D9SG42 100 aa4.86□□□□□ -1.63
RNF220-218ENST00000497469 MT1LQ93083 61 aa4.85□□□□□ -1.63
RNF220-218ENST00000497469 LOC100996750A0A140TA64 210 aa4.84□□□□□ -1.63
RNF220-218ENST00000497469 A0A1B0GU33 70 aa4.82□□□□□ -1.64
RNF220-218ENST00000497469 KRTAP12-1P59990 96 aa4.77□□□□□ -1.65
RNF220-218ENST00000497469 SPINT4Q6UDR6 99 aa4.77□□□□□ -1.65
RNF220-218ENST00000497469 CCDC179H3BU77 68 aa4.76□□□□□ -1.65
RNF220-218ENST00000497469 KRTAP5-5Q701N2 237 aaPredicted RBP4.76□□□□□ -1.65
RNF220-218ENST00000497469 SYNE1Q8NF91 8797 aaKnown RBP4.76□□□□□ -1.65
RNF220-218ENST00000497469 KRTAP5-2Q701N4 177 aa4.75□□□□□ -1.65
RNF220-218ENST00000497469 A0A1B0GU69 56 aa4.74□□□□□ -1.65
RNF220-218ENST00000497469 A8MU10 97 aa4.69□□□□□ -1.66
RNF220-218ENST00000497469 SMIM26A0A096LP01 95 aa4.66□□□□□ -1.66
RNF220-218ENST00000497469 ATP5EP56381 51 aaPredicted RBP4.64□□□□□ -1.67
RNF220-218ENST00000497469 PCP4P48539 62 aa4.63□□□□□ -1.67
RNF220-218ENST00000497469 TMEM258P61165 79 aa4.62□□□□□ -1.67
RNF220-218ENST00000497469 OBSCNQ5VST9 7968 aa4.59□□□□□ -1.67
RNF220-218ENST00000497469 PRR15LQ9BU68 103 aa4.57□□□□□ -1.68
RNF220-218ENST00000497469 C10orf95Q9H7T3 257 aa4.57□□□□□ -1.68
RNF220-218ENST00000497469 LINC01558Q9Y6Z2 57 aa4.57□□□□□ -1.68
RNF220-218ENST00000497469 LCE3AQ5TA76 89 aa4.52□□□□□ -1.69
RNF220-218ENST00000497469 TNP1P09430 55 aa4.5□□□□□ -1.69
RNF220-218ENST00000497469 UQCR11O14957 56 aa4.44□□□□□ -1.7
RNF220-218ENST00000497469 KRTAP5-1Q6L8H4 278 aa4.37□□□□□ -1.71
RNF220-218ENST00000497469 MIR22HGQ0VDD5 57 aa4.35□□□□□ -1.71
RNF220-218ENST00000497469 RPS28P62857 69 aaKnown RBP4.34□□□□□ -1.71
RNF220-218ENST00000497469 KRTAP12-3P60328 96 aa4.32□□□□□ -1.72
RNF220-218ENST00000497469 PSPHP1O15172 72 aa4.3□□□□□ -1.72
RNF220-218ENST00000497469 V9GYY9 64 aa4.3□□□□□ -1.72
RNF220-218ENST00000497469 Q1T7F1 81 aa4.28□□□□□ -1.72
RNF220-218ENST00000497469 KRTAP9-4Q9BYQ2 154 aa4.26□□□□□ -1.73
RNF220-218ENST00000497469 KRTAP25-1Q3LHN0 102 aa4.25□□□□□ -1.73
RNF220-218ENST00000497469 KRTAP6-2Q3LI66 62 aa4.23□□□□□ -1.73
RNF220-218ENST00000497469 K7ERS5 55 aa4.22□□□□□ -1.73
RNF220-218ENST00000497469 KRTAP6-1Q3LI64 71 aa4.2□□□□□ -1.74
RNF220-218ENST00000497469 A6NED7 52 aa4.13□□□□□ -1.75
RNF220-218ENST00000497469 KRTAP23-1A1A580 65 aa4.08□□□□□ -1.76
RNF220-218ENST00000497469 MT1AP04731 61 aa4.08□□□□□ -1.76
RNF220-218ENST00000497469 KRTAP15-1Q3LI76 137 aa4.04□□□□□ -1.76
RNF220-218ENST00000497469 CDC42SE1Q9NRR8 79 aa4.03□□□□□ -1.76
RNF220-218ENST00000497469 KRTAP19-4Q3LI73 84 aa4.01□□□□□ -1.77
RNF220-218ENST00000497469 LCE3CQ5T5A8 94 aa3.98□□□□□ -1.77
RNF220-218ENST00000497469 ROMO1P60602 79 aa3.97□□□□□ -1.77
RNF220-218ENST00000497469 KRTAP4-2Q9BYR5 136 aa3.9□□□□□ -1.79
RNF220-218ENST00000497469 BRK1Q8WUW1 75 aa3.89□□□□□ -1.79
RNF220-218ENST00000497469 KRTAP4-12Q9BQ66 201 aa3.85□□□□□ -1.79
RNF220-218ENST00000497469 KRTAP9-6A8MVA2 160 aa3.81□□□□□ -1.8
RNF220-218ENST00000497469 PHGR1C9JFL3 82 aa3.76□□□□□ -1.81
RNF220-218ENST00000497469 MT3P25713 68 aa3.76□□□□□ -1.81
RNF220-218ENST00000497469 SVIPQ8NHG7 77 aa3.73□□□□□ -1.81
RNF220-218ENST00000497469 LCE1BQ5T7P3 118 aa3.72□□□□□ -1.81
RNF220-218ENST00000497469 PRO0628Q9UI54 55 aa3.69□□□□□ -1.82
RNF220-218ENST00000497469 PMAIP1Q13794 54 aa3.66□□□□□ -1.82
RNF220-218ENST00000497469 LCE1EQ5T753 118 aa3.66□□□□□ -1.82
RNF220-218ENST00000497469 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
RNF220-218ENST00000497469 KTN1-AS1Q86SY8 53 aa3.45□□□□□ -1.86
RNF220-218ENST00000497469 PRAC1Q96KF2 57 aa3.45□□□□□ -1.86
RNF220-218ENST00000497469 LCE1CQ5T751 118 aa3.43□□□□□ -1.86
RNF220-218ENST00000497469 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
RNF220-218ENST00000497469 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
RNF220-218ENST00000497469 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.95
RNF220-218ENST00000497469 LUZP6Q538Z0 58 aa2.87□□□□□ -1.95
RNF220-218ENST00000497469 LCE3DQ9BYE3 92 aa2.86□□□□□ -1.95
RNF220-218ENST00000497469 KRTAP21-1Q3LI58 79 aa2.81□□□□□ -1.96
RNF220-218ENST00000497469 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
RNF220-218ENST00000497469 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
RNF220-218ENST00000497469 LCE3EQ5T5B0 92 aa2.7□□□□□ -1.98
RNF220-218ENST00000497469 NDUFAF8A1L188 74 aa2.62□□□□□ -1.99
RNF220-218ENST00000497469 H3BS24 57 aa2.58□□□□□ -2
RNF220-218ENST00000497469 A0A0A0MQY5 61 aa2.35□□□□□ -2.03
RNF220-218ENST00000497469 INE1O15225 51 aa2.17□□□□□ -2.06
RNF220-218ENST00000497469 PRM1P04553 51 aa2.06□□□□□ -2.08
RNF220-218ENST00000497469 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 434 ms