RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 SMG1Q96Q15 3661 aaKnown RBP-1.01□□□□□ -2.57
TARDBP-210ENST00000496840 ITPR2Q14571 2701 aa-1.03□□□□□ -2.57
TARDBP-210ENST00000496840 RPL39P62891 51 aaKnown RBP-1.05□□□□□ -2.58
TARDBP-210ENST00000496840 LINC01590Q5TEZ4 76 aa-1.06□□□□□ -2.58
TARDBP-210ENST00000496840 TLN1Q9Y490 2541 aaKnown RBP-1.06□□□□□ -2.58
TARDBP-210ENST00000496840 CFAP54Q96N23 3096 aa-1.06□□□□□ -2.58
TARDBP-210ENST00000496840 SAMD9LQ8IVG5 1584 aa-1.07□□□□□ -2.58
TARDBP-210ENST00000496840 MT1BP07438 61 aa-1.07□□□□□ -2.58
TARDBP-210ENST00000496840 RPS29P62273 56 aaKnown RBP-1.07□□□□□ -2.58
TARDBP-210ENST00000496840 PRUNE2Q8WUY3 3088 aa-1.07□□□□□ -2.58
TARDBP-210ENST00000496840 VPS13CQ709C8 3753 aa-1.09□□□□□ -2.58
TARDBP-210ENST00000496840 ATP7AQ04656 1500 aa-1.1□□□□□ -2.58
TARDBP-210ENST00000496840 MYO15AQ9UKN7 3530 aa-1.11□□□□□ -2.59
TARDBP-210ENST00000496840 RHPN1-AS1Q9BWJ2 59 aa-1.12□□□□□ -2.59
TARDBP-210ENST00000496840 RPL39LQ96EH5 51 aaKnown RBP-1.13□□□□□ -2.59
TARDBP-210ENST00000496840 DUOX1Q9NRD9 1551 aa-1.13□□□□□ -2.59
TARDBP-210ENST00000496840 ATMQ13315 3056 aa-1.14□□□□□ -2.59
TARDBP-210ENST00000496840 FREM2Q5SZK8 3169 aa-1.17□□□□□ -2.6
TARDBP-210ENST00000496840 FRYLO94915 3013 aa-1.17□□□□□ -2.6
TARDBP-210ENST00000496840 CEP250Q9BV73 2442 aa-1.18□□□□□ -2.6
TARDBP-210ENST00000496840 A0A096LNI7 61 aa-1.19□□□□□ -2.6
TARDBP-210ENST00000496840 KRTAP19-6Q3LI70 58 aa-1.19□□□□□ -2.6
TARDBP-210ENST00000496840 TOP2AP11388 1531 aaKnown RBP-1.2□□□□□ -2.6
TARDBP-210ENST00000496840 DEFB133Q30KQ1 61 aa-1.21□□□□□ -2.6
TARDBP-210ENST00000496840 PCNTO95613 3336 aa-1.23□□□□□ -2.61
TARDBP-210ENST00000496840 HTN1P15515 57 aa-1.24□□□□□ -2.61
TARDBP-210ENST00000496840 DMDP11532 3685 aa-1.25□□□□□ -2.61
TARDBP-210ENST00000496840 MT1FP04733 61 aa-1.25□□□□□ -2.61
TARDBP-210ENST00000496840 DEFB104AQ8WTQ1 72 aa-1.25□□□□□ -2.61
TARDBP-210ENST00000496840 MROH2BQ7Z745 1585 aa-1.26□□□□□ -2.61
TARDBP-210ENST00000496840 WDFY3Q8IZQ1 3526 aa-1.29□□□□□ -2.62
TARDBP-210ENST00000496840 CEP350Q5VT06 3117 aa-1.3□□□□□ -2.62
TARDBP-210ENST00000496840 TTTY10Q9BZA0 68 aa-1.3□□□□□ -2.62
TARDBP-210ENST00000496840 BOD1L1Q8NFC6 3051 aa-1.31□□□□□ -2.62
TARDBP-210ENST00000496840 WDFY4Q6ZS81 3184 aa-1.31□□□□□ -2.62
TARDBP-210ENST00000496840 SZT2Q5T011 3432 aa-1.32□□□□□ -2.62
TARDBP-210ENST00000496840 DEFB124Q8NES8 71 aa-1.33□□□□□ -2.62
TARDBP-210ENST00000496840 CD52P31358 61 aa-1.34□□□□□ -2.62
TARDBP-210ENST00000496840 DNAH12Q6ZR08 3092 aa-1.36□□□□□ -2.63
TARDBP-210ENST00000496840 SPEGQ15772 3267 aa-1.39□□□□□ -2.63
TARDBP-210ENST00000496840 SNRPGP62308 76 aaKnown RBP-1.39□□□□□ -2.63
TARDBP-210ENST00000496840 MUC3AQ02505 3323 aa-1.4□□□□□ -2.63
TARDBP-210ENST00000496840 H3BUX3 64 aa-1.43□□□□□ -2.64
TARDBP-210ENST00000496840 EP400Q96L91 3159 aa-1.45□□□□□ -2.64
TARDBP-210ENST00000496840 K7EIM0 57 aa-1.45□□□□□ -2.64
TARDBP-210ENST00000496840 MKI67P46013 3256 aaKnown RBP-1.45□□□□□ -2.64
TARDBP-210ENST00000496840 CENPEQ02224 2701 aa-1.47□□□□□ -2.65
TARDBP-210ENST00000496840 XIRP2A4UGR9 3374 aa-1.49□□□□□ -2.65
TARDBP-210ENST00000496840 ARHGAP5-AS1Q96IT6 56 aa-1.49□□□□□ -2.65
TARDBP-210ENST00000496840 GCC2Q8IWJ2 1684 aa-1.51□□□□□ -2.65
TARDBP-210ENST00000496840 DCHS1Q96JQ0 3298 aa-1.53□□□□□ -2.65
TARDBP-210ENST00000496840 PRCDQ00LT1 54 aa-1.53□□□□□ -2.65
TARDBP-210ENST00000496840 LOC400499M0QZD8 3231 aa-1.53□□□□□ -2.65
TARDBP-210ENST00000496840 LINC01556Q5JQF7 62 aa-1.55□□□□□ -2.66
TARDBP-210ENST00000496840 CFAP47Q6ZTR5 3102 aa-1.61□□□□□ -2.67
TARDBP-210ENST00000496840 USP34Q70CQ2 3546 aa-1.63□□□□□ -2.67
TARDBP-210ENST00000496840 KRTAP19-2Q3LHN2 52 aa-1.63□□□□□ -2.67
TARDBP-210ENST00000496840 UNC80Q8N2C7 3258 aa-1.63□□□□□ -2.67
TARDBP-210ENST00000496840 ASPMQ8IZT6 3477 aa-1.65□□□□□ -2.67
TARDBP-210ENST00000496840 TMEM167AQ8TBQ9 72 aa-1.66□□□□□ -2.68
TARDBP-210ENST00000496840 DNAH14Q0VDD8 3507 aa-1.68□□□□□ -2.68
TARDBP-210ENST00000496840 H3BSH0 61 aa-1.69□□□□□ -2.68
TARDBP-210ENST00000496840 APELAP0DMC3 54 aa-1.7□□□□□ -2.68
TARDBP-210ENST00000496840 BRCA2P51587 3418 aa-1.71□□□□□ -2.68
TARDBP-210ENST00000496840 A0A096LPF7 62 aa-1.71□□□□□ -2.68
TARDBP-210ENST00000496840 RPL39P5Q59GN2 51 aa-1.76□□□□□ -2.69
TARDBP-210ENST00000496840 DEFB108AA8MXU0 73 aa-1.81□□□□□ -2.7
TARDBP-210ENST00000496840 VCANP13611 3396 aa-1.84□□□□□ -2.7
TARDBP-210ENST00000496840 CENPFP49454 3210 aa-1.84□□□□□ -2.7
TARDBP-210ENST00000496840 CDH23Q9H251 3354 aa-1.88□□□□□ -2.71
TARDBP-210ENST00000496840 HTN3P15516 51 aa-1.91□□□□□ -2.72
TARDBP-210ENST00000496840 VPS13AQ96RL7 3174 aa-1.97□□□□□ -2.72
TARDBP-210ENST00000496840 Q9Y3F1 56 aa-1.97□□□□□ -2.72
TARDBP-210ENST00000496840 UTRNP46939 3433 aa-2.11□□□□□ -2.75
TARDBP-210ENST00000496840 DEFB108BQ8NET1 73 aa-2.16□□□□□ -2.76
TARDBP-210ENST00000496840 COX14Q96I36 57 aa-2.19□□□□□ -2.76
TARDBP-210ENST00000496840 GOLGB1Q14789 3259 aaKnown RBP-2.24□□□□□ -2.77
TARDBP-210ENST00000496840 STATHP02808 62 aa-2.47□□□□□ -2.8
Retrieved 78 of 20,778 RNA–protein pairs in 83.6 ms