RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 V9GYY9 64 aa7.35□□□□□ -1.23
COL9A2-211ENST00000496215 KRTAP4-9Q9BYQ8 210 aa7.33□□□□□ -1.24
COL9A2-211ENST00000496215 MT1MQ8N339 61 aa7.31□□□□□ -1.24
COL9A2-211ENST00000496215 PSPHP1O15172 72 aa7.29□□□□□ -1.24
COL9A2-211ENST00000496215 Q1T7F1 81 aa7.27□□□□□ -1.25
COL9A2-211ENST00000496215 K7ERS5 55 aa7.26□□□□□ -1.25
COL9A2-211ENST00000496215 KRTAP12-3P60328 96 aa7.19□□□□□ -1.26
COL9A2-211ENST00000496215 KRTAP25-1Q3LHN0 102 aa7.18□□□□□ -1.26
COL9A2-211ENST00000496215 KRTAP4-3Q9BYR4 195 aa7.18□□□□□ -1.26
COL9A2-211ENST00000496215 LCE1DQ5T752 114 aa7.08□□□□□ -1.28
COL9A2-211ENST00000496215 A6NED7 52 aa7.07□□□□□ -1.28
COL9A2-211ENST00000496215 HMCN1Q96RW7 5635 aa7.06□□□□□ -1.28
COL9A2-211ENST00000496215 LCE4AQ5TA78 99 aa7.02□□□□□ -1.29
COL9A2-211ENST00000496215 KRTAP4-7Q9BYR0 210 aa7.02□□□□□ -1.29
COL9A2-211ENST00000496215 MT4P47944 62 aa6.97□□□□□ -1.29
COL9A2-211ENST00000496215 KRTAP5-4Q6L8H1 288 aa6.96□□□□□ -1.3
COL9A2-211ENST00000496215 PCP4P48539 62 aa6.93□□□□□ -1.3
COL9A2-211ENST00000496215 RPS28P62857 69 aaKnown RBP6.93□□□□□ -1.3
COL9A2-211ENST00000496215 KRTAP23-1A1A580 65 aa6.89□□□□□ -1.31
COL9A2-211ENST00000496215 AHNAK2Q8IVF2 5795 aa6.89□□□□□ -1.31
COL9A2-211ENST00000496215 KRTAP5-10Q6L8G5 202 aa6.88□□□□□ -1.31
COL9A2-211ENST00000496215 CDC42SE1Q9NRR8 79 aa6.88□□□□□ -1.31
COL9A2-211ENST00000496215 KRTAP4-6Q9BYQ5 205 aa6.83□□□□□ -1.32
COL9A2-211ENST00000496215 KRTAP19-4Q3LI73 84 aa6.77□□□□□ -1.33
COL9A2-211ENST00000496215 ROMO1P60602 79 aa6.76□□□□□ -1.33
COL9A2-211ENST00000496215 KRTAP15-1Q3LI76 137 aa6.74□□□□□ -1.33
COL9A2-211ENST00000496215 KRTAP5-5Q701N2 237 aaPredicted RBP6.72□□□□□ -1.33
COL9A2-211ENST00000496215 KRTAP5-7Q6L8G8 165 aa6.66□□□□□ -1.34
COL9A2-211ENST00000496215 LOC100996750A0A140TA64 210 aa6.63□□□□□ -1.35
COL9A2-211ENST00000496215 LCE3CQ5T5A8 94 aa6.62□□□□□ -1.35
COL9A2-211ENST00000496215 KRTAP5-3Q6L8H2 238 aa6.56□□□□□ -1.36
COL9A2-211ENST00000496215 KRTAP20-2Q3LI61 65 aa6.55□□□□□ -1.36
COL9A2-211ENST00000496215 SPRR5A0A1B0GTR4 108 aa6.5□□□□□ -1.37
COL9A2-211ENST00000496215 KRTAP12-4P60329 112 aa6.5□□□□□ -1.37
COL9A2-211ENST00000496215 SYNE1Q8NF91 8797 aaKnown RBP6.48□□□□□ -1.37
COL9A2-211ENST00000496215 MT1AP04731 61 aa6.27□□□□□ -1.41
COL9A2-211ENST00000496215 KRTAP9-6A8MVA2 160 aa6.22□□□□□ -1.41
COL9A2-211ENST00000496215 KRTAP6-1Q3LI64 71 aa6.21□□□□□ -1.42
COL9A2-211ENST00000496215 BRK1Q8WUW1 75 aa6.16□□□□□ -1.42
COL9A2-211ENST00000496215 KRTAP5-2Q701N4 177 aa6.11□□□□□ -1.43
COL9A2-211ENST00000496215 KRTAP9-4Q9BYQ2 154 aa6.02□□□□□ -1.45
COL9A2-211ENST00000496215 KRTAP4-11Q9BYQ6 195 aa5.96□□□□□ -1.46
COL9A2-211ENST00000496215 KRTAP6-2Q3LI66 62 aa5.92□□□□□ -1.46
COL9A2-211ENST00000496215 KRTAP5-8O75690 187 aa5.8□□□□□ -1.48
COL9A2-211ENST00000496215 MUC5ACP98088 5654 aa5.79□□□□□ -1.48
COL9A2-211ENST00000496215 AHNAKQ09666 5890 aaKnown RBP5.77□□□□□ -1.49
COL9A2-211ENST00000496215 PMAIP1Q13794 54 aa5.76□□□□□ -1.49
COL9A2-211ENST00000496215 OBSCNQ5VST9 7968 aa5.75□□□□□ -1.49
COL9A2-211ENST00000496215 MT3P25713 68 aa5.72□□□□□ -1.49
COL9A2-211ENST00000496215 MUC5BQ9HC84 5762 aaPredicted RBP5.71□□□□□ -1.5
COL9A2-211ENST00000496215 PRAC1Q96KF2 57 aa5.54□□□□□ -1.52
COL9A2-211ENST00000496215 KRTAP5-1Q6L8H4 278 aa5.48□□□□□ -1.53
COL9A2-211ENST00000496215 KRTAP9-9Q9BYP9 154 aa5.45□□□□□ -1.54
COL9A2-211ENST00000496215 PRO0628Q9UI54 55 aa5.38□□□□□ -1.55
COL9A2-211ENST00000496215 LCE1EQ5T753 118 aa5.22□□□□□ -1.57
COL9A2-211ENST00000496215 KTN1-AS1Q86SY8 53 aa5.16□□□□□ -1.58
COL9A2-211ENST00000496215 SVIPQ8NHG7 77 aa4.99□□□□□ -1.61
COL9A2-211ENST00000496215 KRTAP4-2Q9BYR5 136 aa4.97□□□□□ -1.61
COL9A2-211ENST00000496215 LCE1BQ5T7P3 118 aa4.92□□□□□ -1.62
COL9A2-211ENST00000496215 LCE1CQ5T751 118 aa4.85□□□□□ -1.63
COL9A2-211ENST00000496215 LCE3DQ9BYE3 92 aa4.79□□□□□ -1.64
COL9A2-211ENST00000496215 LUZP6Q538Z0 58 aa4.7□□□□□ -1.66
COL9A2-211ENST00000496215 LCE3EQ5T5B0 92 aa4.52□□□□□ -1.69
COL9A2-211ENST00000496215 KRTAP4-12Q9BQ66 201 aa4.49□□□□□ -1.69
COL9A2-211ENST00000496215 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.42□□□□□ -1.7
COL9A2-211ENST00000496215 KRTAP5-11Q6L8G4 156 aa4.4□□□□□ -1.71
COL9A2-211ENST00000496215 LCE1FQ5T754 118 aa4.24□□□□□ -1.73
COL9A2-211ENST00000496215 KRTAP21-2Q3LI59 83 aa4.1□□□□□ -1.75
COL9A2-211ENST00000496215 PHGR1C9JFL3 82 aa4□□□□□ -1.77
COL9A2-211ENST00000496215 NDUFAF8A1L188 74 aa3.78□□□□□ -1.8
COL9A2-211ENST00000496215 KRTAP4-4Q9BYR3 166 aa3.76□□□□□ -1.81
COL9A2-211ENST00000496215 MUC19Q7Z5P9 8384 aa3.54□□□□□ -1.84
COL9A2-211ENST00000496215 PRM1P04553 51 aa3.46□□□□□ -1.86
COL9A2-211ENST00000496215 INE1O15225 51 aa3.04□□□□□ -1.92
COL9A2-211ENST00000496215 H3BS24 57 aa3.02□□□□□ -1.93
COL9A2-211ENST00000496215 A0A0A0MQY5 61 aa2.99□□□□□ -1.93
COL9A2-211ENST00000496215 KRTAP21-1Q3LI58 79 aa2.99□□□□□ -1.93
COL9A2-211ENST00000496215 MUC16Q8WXI7 14507 aa2.52□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 6.3 ms