RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 LCE4AQ5TA78 99 aa8.46□□□□□ -1.06
HLA-C-209ENST00000495835 LCE1DQ5T752 114 aa8.39□□□□□ -1.07
HLA-C-209ENST00000495835 GPR98Q8WXG9 6306 aa8.35□□□□□ -1.07
HLA-C-209ENST00000495835 KRTAP12-3P60328 96 aa8.32□□□□□ -1.08
HLA-C-209ENST00000495835 HMCN1Q96RW7 5635 aa8.3□□□□□ -1.08
HLA-C-209ENST00000495835 KRTAP4-3Q9BYR4 195 aa8.3□□□□□ -1.08
HLA-C-209ENST00000495835 KRTAP5-4Q6L8H1 288 aa8.27□□□□□ -1.09
HLA-C-209ENST00000495835 MT4P47944 62 aa8.25□□□□□ -1.09
HLA-C-209ENST00000495835 MIR22HGQ0VDD5 57 aa8.24□□□□□ -1.09
HLA-C-209ENST00000495835 KRTAP25-1Q3LHN0 102 aa8.21□□□□□ -1.1
HLA-C-209ENST00000495835 PCP4P48539 62 aa8.17□□□□□ -1.1
HLA-C-209ENST00000495835 K7ERS5 55 aa8.16□□□□□ -1.1
HLA-C-209ENST00000495835 V9GYY9 64 aa8.14□□□□□ -1.11
HLA-C-209ENST00000495835 KRTAP4-7Q9BYR0 210 aa8.11□□□□□ -1.11
HLA-C-209ENST00000495835 Q1T7F1 81 aa8.04□□□□□ -1.12
HLA-C-209ENST00000495835 KRTAP19-4Q3LI73 84 aa8.04□□□□□ -1.12
HLA-C-209ENST00000495835 KRTAP4-6Q9BYQ5 205 aa8.03□□□□□ -1.12
HLA-C-209ENST00000495835 PSPHP1O15172 72 aa7.99□□□□□ -1.13
HLA-C-209ENST00000495835 AHNAK2Q8IVF2 5795 aa7.98□□□□□ -1.13
HLA-C-209ENST00000495835 KRTAP23-1A1A580 65 aa7.97□□□□□ -1.13
HLA-C-209ENST00000495835 KRTAP5-5Q701N2 237 aaPredicted RBP7.91□□□□□ -1.14
HLA-C-209ENST00000495835 KRTAP5-10Q6L8G5 202 aa7.84□□□□□ -1.15
HLA-C-209ENST00000495835 SPRR5A0A1B0GTR4 108 aa7.8□□□□□ -1.16
HLA-C-209ENST00000495835 KRTAP20-2Q3LI61 65 aa7.77□□□□□ -1.17
HLA-C-209ENST00000495835 KRTAP15-1Q3LI76 137 aa7.77□□□□□ -1.17
HLA-C-209ENST00000495835 A6NED7 52 aa7.75□□□□□ -1.17
HLA-C-209ENST00000495835 KRTAP12-4P60329 112 aa7.75□□□□□ -1.17
HLA-C-209ENST00000495835 LOC100996750A0A140TA64 210 aa7.69□□□□□ -1.18
HLA-C-209ENST00000495835 CDC42SE1Q9NRR8 79 aa7.69□□□□□ -1.18
HLA-C-209ENST00000495835 LCE3CQ5T5A8 94 aa7.67□□□□□ -1.18
HLA-C-209ENST00000495835 KRTAP5-3Q6L8H2 238 aa7.65□□□□□ -1.18
HLA-C-209ENST00000495835 SYNE1Q8NF91 8797 aaKnown RBP7.62□□□□□ -1.19
HLA-C-209ENST00000495835 RPS28P62857 69 aaKnown RBP7.58□□□□□ -1.2
HLA-C-209ENST00000495835 KRTAP5-7Q6L8G8 165 aa7.57□□□□□ -1.2
HLA-C-209ENST00000495835 ROMO1P60602 79 aa7.55□□□□□ -1.2
HLA-C-209ENST00000495835 MT1AP04731 61 aa7.35□□□□□ -1.23
HLA-C-209ENST00000495835 KRTAP6-1Q3LI64 71 aa7.26□□□□□ -1.25
HLA-C-209ENST00000495835 KRTAP5-2Q701N4 177 aa7.23□□□□□ -1.25
HLA-C-209ENST00000495835 KRTAP9-6A8MVA2 160 aa7.17□□□□□ -1.26
HLA-C-209ENST00000495835 KRTAP9-4Q9BYQ2 154 aa7.12□□□□□ -1.27
HLA-C-209ENST00000495835 KRTAP4-11Q9BYQ6 195 aa7.12□□□□□ -1.27
HLA-C-209ENST00000495835 KRTAP6-2Q3LI66 62 aa6.95□□□□□ -1.3
HLA-C-209ENST00000495835 KRTAP5-8O75690 187 aa6.88□□□□□ -1.31
HLA-C-209ENST00000495835 BRK1Q8WUW1 75 aa6.83□□□□□ -1.32
HLA-C-209ENST00000495835 OBSCNQ5VST9 7968 aa6.79□□□□□ -1.32
HLA-C-209ENST00000495835 MT3P25713 68 aa6.76□□□□□ -1.33
HLA-C-209ENST00000495835 MUC5BQ9HC84 5762 aaPredicted RBP6.59□□□□□ -1.35
HLA-C-209ENST00000495835 MUC5ACP98088 5654 aa6.57□□□□□ -1.36
HLA-C-209ENST00000495835 AHNAKQ09666 5890 aaKnown RBP6.56□□□□□ -1.36
HLA-C-209ENST00000495835 KRTAP9-9Q9BYP9 154 aa6.55□□□□□ -1.36
HLA-C-209ENST00000495835 PRO0628Q9UI54 55 aa6.52□□□□□ -1.37
HLA-C-209ENST00000495835 KRTAP5-1Q6L8H4 278 aa6.48□□□□□ -1.37
HLA-C-209ENST00000495835 PMAIP1Q13794 54 aa6.44□□□□□ -1.38
HLA-C-209ENST00000495835 LCE1EQ5T753 118 aa6.26□□□□□ -1.41
HLA-C-209ENST00000495835 KTN1-AS1Q86SY8 53 aa6.08□□□□□ -1.44
HLA-C-209ENST00000495835 PRAC1Q96KF2 57 aa6.03□□□□□ -1.44
HLA-C-209ENST00000495835 KRTAP4-2Q9BYR5 136 aa5.84□□□□□ -1.47
HLA-C-209ENST00000495835 SVIPQ8NHG7 77 aa5.8□□□□□ -1.48
HLA-C-209ENST00000495835 LCE1CQ5T751 118 aa5.79□□□□□ -1.48
HLA-C-209ENST00000495835 LCE1BQ5T7P3 118 aa5.79□□□□□ -1.48
HLA-C-209ENST00000495835 LCE3DQ9BYE3 92 aa5.53□□□□□ -1.52
HLA-C-209ENST00000495835 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.28□□□□□ -1.56
HLA-C-209ENST00000495835 KRTAP5-11Q6L8G4 156 aa5.24□□□□□ -1.57
HLA-C-209ENST00000495835 KRTAP4-12Q9BQ66 201 aa5.24□□□□□ -1.57
HLA-C-209ENST00000495835 LCE3EQ5T5B0 92 aa5.19□□□□□ -1.58
HLA-C-209ENST00000495835 LCE1FQ5T754 118 aa5.17□□□□□ -1.58
HLA-C-209ENST00000495835 LUZP6Q538Z0 58 aa5.11□□□□□ -1.59
HLA-C-209ENST00000495835 KRTAP21-2Q3LI59 83 aa4.81□□□□□ -1.64
HLA-C-209ENST00000495835 NDUFAF8A1L188 74 aa4.67□□□□□ -1.66
HLA-C-209ENST00000495835 PHGR1C9JFL3 82 aa4.55□□□□□ -1.68
HLA-C-209ENST00000495835 KRTAP4-4Q9BYR3 166 aa4.32□□□□□ -1.72
HLA-C-209ENST00000495835 MUC19Q7Z5P9 8384 aa4.18□□□□□ -1.74
HLA-C-209ENST00000495835 A0A0A0MQY5 61 aa4.11□□□□□ -1.75
HLA-C-209ENST00000495835 H3BS24 57 aa3.89□□□□□ -1.79
HLA-C-209ENST00000495835 INE1O15225 51 aa3.88□□□□□ -1.79
HLA-C-209ENST00000495835 PRM1P04553 51 aa3.81□□□□□ -1.8
HLA-C-209ENST00000495835 KRTAP21-1Q3LI58 79 aa3.5□□□□□ -1.85
HLA-C-209ENST00000495835 MUC16Q8WXI7 14507 aa2.96□□□□□ -1.94
Retrieved 78 of 20,778 RNA–protein pairs in 98.5 ms