RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 SYNE1Q8NF91 8797 aaKnown RBP4.95□□□□□ -1.62
CHMP2B-205ENST00000494980 KRTAP13-4Q3LI77 160 aa4.89□□□□□ -1.63
CHMP2B-205ENST00000494980 KRTAP5-5Q701N2 237 aaPredicted RBP4.89□□□□□ -1.63
CHMP2B-205ENST00000494980 A0A1B0GV90 55 aa4.88□□□□□ -1.63
CHMP2B-205ENST00000494980 SPANXA2-OT1Q8N9U9 137 aa4.86□□□□□ -1.63
CHMP2B-205ENST00000494980 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.82□□□□□ -1.64
CHMP2B-205ENST00000494980 SNURFQ9Y675 71 aa4.8□□□□□ -1.64
CHMP2B-205ENST00000494980 A0A0D9SG42 100 aa4.79□□□□□ -1.64
CHMP2B-205ENST00000494980 KRTAP5-2Q701N4 177 aa4.79□□□□□ -1.64
CHMP2B-205ENST00000494980 SEC61GP60059 68 aa4.78□□□□□ -1.64
CHMP2B-205ENST00000494980 OBSCNQ5VST9 7968 aa4.77□□□□□ -1.65
CHMP2B-205ENST00000494980 SERP1Q9Y6X1 66 aa4.76□□□□□ -1.65
CHMP2B-205ENST00000494980 KRTAP5-11Q6L8G4 156 aa4.72□□□□□ -1.65
CHMP2B-205ENST00000494980 SPINT4Q6UDR6 99 aa4.72□□□□□ -1.65
CHMP2B-205ENST00000494980 K7ERU9 68 aa4.7□□□□□ -1.66
CHMP2B-205ENST00000494980 COA5Q86WW8 74 aa4.69□□□□□ -1.66
CHMP2B-205ENST00000494980 A0A1B0GU33 70 aa4.67□□□□□ -1.66
CHMP2B-205ENST00000494980 SPATA8Q6RVD6 105 aa4.67□□□□□ -1.66
CHMP2B-205ENST00000494980 SERP2Q8N6R1 65 aa4.66□□□□□ -1.66
CHMP2B-205ENST00000494980 KRTAP12-1P59990 96 aa4.64□□□□□ -1.67
CHMP2B-205ENST00000494980 SMIM26A0A096LP01 95 aa4.58□□□□□ -1.68
CHMP2B-205ENST00000494980 TNP1P09430 55 aa4.56□□□□□ -1.68
CHMP2B-205ENST00000494980 C10orf95Q9H7T3 257 aa4.56□□□□□ -1.68
CHMP2B-205ENST00000494980 LCE3AQ5TA76 89 aa4.53□□□□□ -1.68
CHMP2B-205ENST00000494980 A0A1B0GU69 56 aa4.5□□□□□ -1.69
CHMP2B-205ENST00000494980 MT3P25713 68 aa4.46□□□□□ -1.7
CHMP2B-205ENST00000494980 A8MU10 97 aa4.44□□□□□ -1.7
CHMP2B-205ENST00000494980 COX7CP15954 63 aa4.44□□□□□ -1.7
CHMP2B-205ENST00000494980 LCE1EQ5T753 118 aa4.43□□□□□ -1.7
CHMP2B-205ENST00000494980 KRTAP5-1Q6L8H4 278 aa4.43□□□□□ -1.7
CHMP2B-205ENST00000494980 H7BZZ5 65 aa4.42□□□□□ -1.7
CHMP2B-205ENST00000494980 KRTAP12-3P60328 96 aa4.39□□□□□ -1.71
CHMP2B-205ENST00000494980 PCP4P48539 62 aa4.36□□□□□ -1.71
CHMP2B-205ENST00000494980 PRR15LQ9BU68 103 aa4.34□□□□□ -1.71
CHMP2B-205ENST00000494980 KRTAP6-2Q3LI66 62 aa4.32□□□□□ -1.72
CHMP2B-205ENST00000494980 KRTAP6-1Q3LI64 71 aa4.3□□□□□ -1.72
CHMP2B-205ENST00000494980 A0A0A0MQY5 61 aa4.27□□□□□ -1.73
CHMP2B-205ENST00000494980 MT1AP04731 61 aa4.22□□□□□ -1.73
CHMP2B-205ENST00000494980 KRTAP25-1Q3LHN0 102 aa4.19□□□□□ -1.74
CHMP2B-205ENST00000494980 LINC01558Q9Y6Z2 57 aa4.18□□□□□ -1.74
CHMP2B-205ENST00000494980 ATP5EP56381 51 aaPredicted RBP4.17□□□□□ -1.74
CHMP2B-205ENST00000494980 UQCR11O14957 56 aa4.16□□□□□ -1.74
CHMP2B-205ENST00000494980 ANAPC13Q9BS18 74 aa4.14□□□□□ -1.75
CHMP2B-205ENST00000494980 SVIPQ8NHG7 77 aa4.12□□□□□ -1.75
CHMP2B-205ENST00000494980 K7ERS5 55 aa4.06□□□□□ -1.76
CHMP2B-205ENST00000494980 CCDC179H3BU77 68 aa4.02□□□□□ -1.77
CHMP2B-205ENST00000494980 MIR22HGQ0VDD5 57 aa4.02□□□□□ -1.77
CHMP2B-205ENST00000494980 LCE3CQ5T5A8 94 aa4.02□□□□□ -1.77
CHMP2B-205ENST00000494980 KRTAP4-4Q9BYR3 166 aa4□□□□□ -1.77
CHMP2B-205ENST00000494980 LCE1FQ5T754 118 aa3.96□□□□□ -1.78
CHMP2B-205ENST00000494980 TMEM258P61165 79 aa3.94□□□□□ -1.78
CHMP2B-205ENST00000494980 KRTAP9-6A8MVA2 160 aa3.86□□□□□ -1.79
CHMP2B-205ENST00000494980 V9GYY9 64 aa3.83□□□□□ -1.8
CHMP2B-205ENST00000494980 CDC42SE1Q9NRR8 79 aa3.78□□□□□ -1.8
CHMP2B-205ENST00000494980 RPS28P62857 69 aaKnown RBP3.77□□□□□ -1.81
CHMP2B-205ENST00000494980 PSPHP1O15172 72 aa3.76□□□□□ -1.81
CHMP2B-205ENST00000494980 Q1T7F1 81 aa3.75□□□□□ -1.81
CHMP2B-205ENST00000494980 LCE1BQ5T7P3 118 aa3.75□□□□□ -1.81
CHMP2B-205ENST00000494980 PHGR1C9JFL3 82 aa3.74□□□□□ -1.81
CHMP2B-205ENST00000494980 ROMO1P60602 79 aa3.67□□□□□ -1.82
CHMP2B-205ENST00000494980 NDUFAF8A1L188 74 aa3.66□□□□□ -1.82
CHMP2B-205ENST00000494980 A6NED7 52 aa3.66□□□□□ -1.82
CHMP2B-205ENST00000494980 LCE1CQ5T751 118 aa3.55□□□□□ -1.84
CHMP2B-205ENST00000494980 PRAC1Q96KF2 57 aa3.54□□□□□ -1.84
CHMP2B-205ENST00000494980 LCE3EQ5T5B0 92 aa3.43□□□□□ -1.86
CHMP2B-205ENST00000494980 MUC19Q7Z5P9 8384 aa3.02□□□□□ -1.93
CHMP2B-205ENST00000494980 LCE3DQ9BYE3 92 aa2.86□□□□□ -1.95
CHMP2B-205ENST00000494980 KRTAP21-1Q3LI58 79 aa2.83□□□□□ -1.96
CHMP2B-205ENST00000494980 KRTAP21-2Q3LI59 83 aa2.83□□□□□ -1.96
CHMP2B-205ENST00000494980 BRK1Q8WUW1 75 aa2.82□□□□□ -1.96
CHMP2B-205ENST00000494980 PMAIP1Q13794 54 aa2.66□□□□□ -1.98
CHMP2B-205ENST00000494980 LUZP6Q538Z0 58 aa2.35□□□□□ -2.03
CHMP2B-205ENST00000494980 PRO0628Q9UI54 55 aa2.19□□□□□ -2.06
CHMP2B-205ENST00000494980 KTN1-AS1Q86SY8 53 aa2.18□□□□□ -2.06
CHMP2B-205ENST00000494980 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
CHMP2B-205ENST00000494980 PRM1P04553 51 aa1.83□□□□□ -2.12
CHMP2B-205ENST00000494980 INE1O15225 51 aa1.19□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 189.1 ms