RNA–Protein interactions for RNA: ENST00000494934.5

SRRM1-218, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-218ENST00000494934 STARD9Q9P2P6 4700 aa0.04□□□□□ -2.4
SRRM1-218ENST00000494934 DNAH5Q8TE73 4624 aa0.03□□□□□ -2.4
SRRM1-218ENST00000494934 LINC01556Q5JQF7 62 aa0.03□□□□□ -2.4
SRRM1-218ENST00000494934 CSMD2Q7Z408 3487 aa0.02□□□□□ -2.41
SRRM1-218ENST00000494934 MYO9AB2RTY4 2548 aa0.02□□□□□ -2.41
SRRM1-218ENST00000494934 TLN1Q9Y490 2541 aaKnown RBP0.02□□□□□ -2.41
SRRM1-218ENST00000494934 XIRP2A4UGR9 3374 aa0.02□□□□□ -2.41
SRRM1-218ENST00000494934 DNAH12Q6ZR08 3092 aa0.01□□□□□ -2.41
SRRM1-218ENST00000494934 SZT2Q5T011 3432 aa0.01□□□□□ -2.41
SRRM1-218ENST00000494934 LAMA2P24043 3122 aaKnown RBP0□□□□□ -2.41
SRRM1-218ENST00000494934 MUC2Q02817 5179 aa0□□□□□ -2.41
SRRM1-218ENST00000494934 VPS13CQ709C8 3753 aa0□□□□□ -2.41
SRRM1-218ENST00000494934 EYSQ5T1H1 3165 aa-0□□□□□ -2.41
SRRM1-218ENST00000494934 DMDP11532 3685 aa-0.01□□□□□ -2.41
SRRM1-218ENST00000494934 FREM2Q5SZK8 3169 aa-0.02□□□□□ -2.41
SRRM1-218ENST00000494934 ITPR2Q14571 2701 aa-0.02□□□□□ -2.41
SRRM1-218ENST00000494934 MT1HL1P0DM35 61 aa-0.02□□□□□ -2.41
SRRM1-218ENST00000494934 CEP295Q9C0D2 2601 aa-0.03□□□□□ -2.41
SRRM1-218ENST00000494934 MUC3AQ02505 3323 aa-0.03□□□□□ -2.41
SRRM1-218ENST00000494934 A0A096LPF7 62 aa-0.04□□□□□ -2.42
SRRM1-218ENST00000494934 MKI67P46013 3256 aaKnown RBP-0.05□□□□□ -2.42
SRRM1-218ENST00000494934 DNHD1Q96M86 4753 aa-0.05□□□□□ -2.42
SRRM1-218ENST00000494934 RYR1P21817 5038 aa-0.05□□□□□ -2.42
SRRM1-218ENST00000494934 UBR4Q5T4S7 5183 aa-0.05□□□□□ -2.42
SRRM1-218ENST00000494934 DCHS1Q96JQ0 3298 aa-0.05□□□□□ -2.42
SRRM1-218ENST00000494934 MT2AP02795 61 aa-0.06□□□□□ -2.42
SRRM1-218ENST00000494934 USH2AO75445 5202 aa-0.06□□□□□ -2.42
SRRM1-218ENST00000494934 MT4P47944 62 aa-0.07□□□□□ -2.42
SRRM1-218ENST00000494934 MT1MQ8N339 61 aa-0.07□□□□□ -2.42
SRRM1-218ENST00000494934 MYO15AQ9UKN7 3530 aa-0.07□□□□□ -2.42
SRRM1-218ENST00000494934 CEP350Q5VT06 3117 aa-0.07□□□□□ -2.42
SRRM1-218ENST00000494934 LOC400499M0QZD8 3231 aa-0.08□□□□□ -2.42
SRRM1-218ENST00000494934 WDFY4Q6ZS81 3184 aa-0.08□□□□□ -2.42
SRRM1-218ENST00000494934 MT1GP13640 62 aa-0.09□□□□□ -2.42
SRRM1-218ENST00000494934 CENPEQ02224 2701 aa-0.1□□□□□ -2.43
SRRM1-218ENST00000494934 KRTAP20-2Q3LI61 65 aa-0.11□□□□□ -2.43
SRRM1-218ENST00000494934 PCNTO95613 3336 aa-0.11□□□□□ -2.43
SRRM1-218ENST00000494934 MUC12Q9UKN1 5478 aa-0.13□□□□□ -2.43
SRRM1-218ENST00000494934 BOD1L1Q8NFC6 3051 aa-0.13□□□□□ -2.43
SRRM1-218ENST00000494934 DEFB108BQ8NET1 73 aa-0.13□□□□□ -2.43
SRRM1-218ENST00000494934 COX14Q96I36 57 aa-0.14□□□□□ -2.43
SRRM1-218ENST00000494934 HTN3P15516 51 aa-0.18□□□□□ -2.44
SRRM1-218ENST00000494934 DSTQ03001 7570 aaKnown RBP-0.18□□□□□ -2.44
SRRM1-218ENST00000494934 GPR98Q8WXG9 6306 aa-0.19□□□□□ -2.44
SRRM1-218ENST00000494934 ASPMQ8IZT6 3477 aa-0.21□□□□□ -2.44
SRRM1-218ENST00000494934 BIRC6Q9NR09 4857 aa-0.21□□□□□ -2.44
SRRM1-218ENST00000494934 HERC2O95714 4834 aa-0.22□□□□□ -2.44
SRRM1-218ENST00000494934 MT1BP07438 61 aa-0.22□□□□□ -2.44
SRRM1-218ENST00000494934 SYNE2Q8WXH0 6885 aaKnown RBP-0.22□□□□□ -2.45
SRRM1-218ENST00000494934 EPPK1P58107 5090 aaKnown RBP-0.24□□□□□ -2.45
SRRM1-218ENST00000494934 EP400Q96L91 3159 aa-0.24□□□□□ -2.45
SRRM1-218ENST00000494934 UNC80Q8N2C7 3258 aa-0.24□□□□□ -2.45
SRRM1-218ENST00000494934 RYR3Q15413 4870 aa-0.24□□□□□ -2.45
SRRM1-218ENST00000494934 STATHP02808 62 aa-0.24□□□□□ -2.45
SRRM1-218ENST00000494934 CFAP47Q6ZTR5 3102 aa-0.24□□□□□ -2.45
SRRM1-218ENST00000494934 USP34Q70CQ2 3546 aa-0.25□□□□□ -2.45
SRRM1-218ENST00000494934 WDFY3Q8IZQ1 3526 aa-0.25□□□□□ -2.45
SRRM1-218ENST00000494934 MT1FP04733 61 aa-0.26□□□□□ -2.45
SRRM1-218ENST00000494934 RNF213Q63HN8 5207 aa-0.26□□□□□ -2.45
SRRM1-218ENST00000494934 SPEGQ15772 3267 aa-0.26□□□□□ -2.45
SRRM1-218ENST00000494934 FSIP2Q5CZC0 6907 aa-0.27□□□□□ -2.45
SRRM1-218ENST00000494934 BRCA2P51587 3418 aa-0.31□□□□□ -2.46
SRRM1-218ENST00000494934 HYDINQ4G0P3 5121 aa-0.31□□□□□ -2.46
SRRM1-218ENST00000494934 VCANP13611 3396 aa-0.32□□□□□ -2.46
SRRM1-218ENST00000494934 MACF1Q9UPN3 7388 aaKnown RBP-0.32□□□□□ -2.46
SRRM1-218ENST00000494934 GOLGB1Q14789 3259 aaKnown RBP-0.33□□□□□ -2.46
SRRM1-218ENST00000494934 UTRNP46939 3433 aa-0.34□□□□□ -2.46
SRRM1-218ENST00000494934 CENPFP49454 3210 aa-0.34□□□□□ -2.46
SRRM1-218ENST00000494934 RYR2Q92736 4967 aa-0.37□□□□□ -2.47
SRRM1-218ENST00000494934 KIAA1109Q2LD37 5005 aa-0.37□□□□□ -2.47
SRRM1-218ENST00000494934 VPS13AQ96RL7 3174 aa-0.43□□□□□ -2.48
SRRM1-218ENST00000494934 KRTAP19-2Q3LHN2 52 aa-0.46□□□□□ -2.48
SRRM1-218ENST00000494934 DNAH14Q0VDD8 3507 aa-0.49□□□□□ -2.49
SRRM1-218ENST00000494934 NEBP20929 6669 aa-0.5□□□□□ -2.49
SRRM1-218ENST00000494934 CDH23Q9H251 3354 aa-0.53□□□□□ -2.49
SRRM1-218ENST00000494934 ABCA13Q86UQ4 5058 aa-0.54□□□□□ -2.5
SRRM1-218ENST00000494934 KRTAP20-1Q3LI63 56 aa-0.58□□□□□ -2.5
SRRM1-218ENST00000494934 KRTAP19-6Q3LI70 58 aa-0.69□□□□□ -2.52
Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms