RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 A8MU10 97 aa5.79□□□□□ -1.48
PTPRU-208ENST00000493601 TNP1P09430 55 aa5.79□□□□□ -1.48
PTPRU-208ENST00000493601 PCP4P48539 62 aa5.78□□□□□ -1.48
PTPRU-208ENST00000493601 KRTAP5-4Q6L8H1 288 aa5.77□□□□□ -1.49
PTPRU-208ENST00000493601 KRTAP4-3Q9BYR4 195 aa5.76□□□□□ -1.49
PTPRU-208ENST00000493601 KRTAP4-6Q9BYQ5 205 aa5.67□□□□□ -1.5
PTPRU-208ENST00000493601 AHNAK2Q8IVF2 5795 aa5.67□□□□□ -1.5
PTPRU-208ENST00000493601 KRTAP5-10Q6L8G5 202 aa5.65□□□□□ -1.5
PTPRU-208ENST00000493601 PRR15LQ9BU68 103 aa5.62□□□□□ -1.51
PTPRU-208ENST00000493601 LINC01558Q9Y6Z2 57 aa5.62□□□□□ -1.51
PTPRU-208ENST00000493601 KRTAP12-3P60328 96 aa5.6□□□□□ -1.51
PTPRU-208ENST00000493601 RPS28P62857 69 aaKnown RBP5.57□□□□□ -1.52
PTPRU-208ENST00000493601 KRTAP4-7Q9BYR0 210 aa5.57□□□□□ -1.52
PTPRU-208ENST00000493601 Q1T7F1 81 aa5.51□□□□□ -1.53
PTPRU-208ENST00000493601 V9GYY9 64 aa5.51□□□□□ -1.53
PTPRU-208ENST00000493601 KRTAP5-3Q6L8H2 238 aa5.47□□□□□ -1.53
PTPRU-208ENST00000493601 KRTAP20-2Q3LI61 65 aa5.46□□□□□ -1.54
PTPRU-208ENST00000493601 KRTAP5-7Q6L8G8 165 aa5.46□□□□□ -1.54
PTPRU-208ENST00000493601 KRTAP5-5Q701N2 237 aaPredicted RBP5.45□□□□□ -1.54
PTPRU-208ENST00000493601 SPRR5A0A1B0GTR4 108 aa5.42□□□□□ -1.54
PTPRU-208ENST00000493601 UQCR11O14957 56 aa5.4□□□□□ -1.54
PTPRU-208ENST00000493601 KRTAP12-4P60329 112 aa5.38□□□□□ -1.55
PTPRU-208ENST00000493601 KRTAP25-1Q3LHN0 102 aa5.37□□□□□ -1.55
PTPRU-208ENST00000493601 PSPHP1O15172 72 aa5.35□□□□□ -1.55
PTPRU-208ENST00000493601 LOC100996750A0A140TA64 210 aa5.29□□□□□ -1.56
PTPRU-208ENST00000493601 MIR22HGQ0VDD5 57 aa5.29□□□□□ -1.56
PTPRU-208ENST00000493601 KRTAP19-4Q3LI73 84 aa5.29□□□□□ -1.56
PTPRU-208ENST00000493601 K7ERS5 55 aa5.23□□□□□ -1.57
PTPRU-208ENST00000493601 A6NED7 52 aa5.2□□□□□ -1.58
PTPRU-208ENST00000493601 KRTAP23-1A1A580 65 aa5.15□□□□□ -1.59
PTPRU-208ENST00000493601 KRTAP15-1Q3LI76 137 aa5.15□□□□□ -1.59
PTPRU-208ENST00000493601 LCE3CQ5T5A8 94 aa5.13□□□□□ -1.59
PTPRU-208ENST00000493601 SYNE1Q8NF91 8797 aaKnown RBP5.11□□□□□ -1.59
PTPRU-208ENST00000493601 CDC42SE1Q9NRR8 79 aa5.11□□□□□ -1.59
PTPRU-208ENST00000493601 KRTAP4-11Q9BYQ6 195 aa5.04□□□□□ -1.6
PTPRU-208ENST00000493601 MT1AP04731 61 aa5.02□□□□□ -1.61
PTPRU-208ENST00000493601 KRTAP5-2Q701N4 177 aa5.02□□□□□ -1.61
PTPRU-208ENST00000493601 KRTAP6-1Q3LI64 71 aa4.99□□□□□ -1.61
PTPRU-208ENST00000493601 KRTAP5-8O75690 187 aa4.86□□□□□ -1.63
PTPRU-208ENST00000493601 KRTAP9-4Q9BYQ2 154 aa4.86□□□□□ -1.63
PTPRU-208ENST00000493601 ROMO1P60602 79 aa4.85□□□□□ -1.63
PTPRU-208ENST00000493601 BRK1Q8WUW1 75 aa4.85□□□□□ -1.63
PTPRU-208ENST00000493601 KRTAP9-6A8MVA2 160 aa4.82□□□□□ -1.64
PTPRU-208ENST00000493601 KRTAP6-2Q3LI66 62 aa4.82□□□□□ -1.64
PTPRU-208ENST00000493601 MUC5ACP98088 5654 aa4.74□□□□□ -1.65
PTPRU-208ENST00000493601 MUC5BQ9HC84 5762 aaPredicted RBP4.68□□□□□ -1.66
PTPRU-208ENST00000493601 AHNAKQ09666 5890 aaKnown RBP4.68□□□□□ -1.66
PTPRU-208ENST00000493601 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
PTPRU-208ENST00000493601 KRTAP9-9Q9BYP9 154 aa4.67□□□□□ -1.66
PTPRU-208ENST00000493601 PRO0628Q9UI54 55 aa4.61□□□□□ -1.67
PTPRU-208ENST00000493601 MT3P25713 68 aa4.6□□□□□ -1.67
PTPRU-208ENST00000493601 PMAIP1Q13794 54 aa4.59□□□□□ -1.67
PTPRU-208ENST00000493601 KRTAP5-1Q6L8H4 278 aa4.53□□□□□ -1.68
PTPRU-208ENST00000493601 KTN1-AS1Q86SY8 53 aa4.31□□□□□ -1.72
PTPRU-208ENST00000493601 PRAC1Q96KF2 57 aa4.31□□□□□ -1.72
PTPRU-208ENST00000493601 LCE1EQ5T753 118 aa4.28□□□□□ -1.72
PTPRU-208ENST00000493601 SVIPQ8NHG7 77 aa4.14□□□□□ -1.75
PTPRU-208ENST00000493601 LCE1BQ5T7P3 118 aa4.04□□□□□ -1.76
PTPRU-208ENST00000493601 KRTAP4-2Q9BYR5 136 aa4.04□□□□□ -1.76
PTPRU-208ENST00000493601 LCE1CQ5T751 118 aa3.97□□□□□ -1.77
PTPRU-208ENST00000493601 KRTAP4-12Q9BQ66 201 aa3.73□□□□□ -1.81
PTPRU-208ENST00000493601 LCE3DQ9BYE3 92 aa3.66□□□□□ -1.82
PTPRU-208ENST00000493601 KRTAP5-11Q6L8G4 156 aa3.63□□□□□ -1.83
PTPRU-208ENST00000493601 LUZP6Q538Z0 58 aa3.59□□□□□ -1.83
PTPRU-208ENST00000493601 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.59□□□□□ -1.83
PTPRU-208ENST00000493601 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
PTPRU-208ENST00000493601 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.87
PTPRU-208ENST00000493601 PHGR1C9JFL3 82 aa3.31□□□□□ -1.88
PTPRU-208ENST00000493601 KRTAP21-2Q3LI59 83 aa3.28□□□□□ -1.88
PTPRU-208ENST00000493601 NDUFAF8A1L188 74 aa3.21□□□□□ -1.9
PTPRU-208ENST00000493601 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
PTPRU-208ENST00000493601 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
PTPRU-208ENST00000493601 H3BS24 57 aa2.83□□□□□ -1.96
PTPRU-208ENST00000493601 A0A0A0MQY5 61 aa2.78□□□□□ -1.96
PTPRU-208ENST00000493601 INE1O15225 51 aa2.71□□□□□ -1.98
PTPRU-208ENST00000493601 KRTAP21-1Q3LI58 79 aa2.53□□□□□ -2
PTPRU-208ENST00000493601 PRM1P04553 51 aa2.48□□□□□ -2.01
PTPRU-208ENST00000493601 MUC16Q8WXI7 14507 aa2.06□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms