RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 H7BZZ5 65 aa7.52□□□□□ -1.21
PFDN4-205ENST00000493356 KRTAP5-7Q6L8G8 165 aa7.51□□□□□ -1.21
PFDN4-205ENST00000493356 CCDC179H3BU77 68 aa7.5□□□□□ -1.21
PFDN4-205ENST00000493356 COA5Q86WW8 74 aa7.43□□□□□ -1.22
PFDN4-205ENST00000493356 SPINT4Q6UDR6 99 aa7.4□□□□□ -1.22
PFDN4-205ENST00000493356 SPATA8Q6RVD6 105 aa7.35□□□□□ -1.23
PFDN4-205ENST00000493356 KRTAP12-1P59990 96 aa7.33□□□□□ -1.24
PFDN4-205ENST00000493356 C10orf95Q9H7T3 257 aa7.32□□□□□ -1.24
PFDN4-205ENST00000493356 ATP5EP56381 51 aaPredicted RBP7.3□□□□□ -1.24
PFDN4-205ENST00000493356 LCE3AQ5TA76 89 aa7.28□□□□□ -1.24
PFDN4-205ENST00000493356 SEC61GP60059 68 aa7.25□□□□□ -1.25
PFDN4-205ENST00000493356 KRTAP20-2Q3LI61 65 aa7.25□□□□□ -1.25
PFDN4-205ENST00000493356 SERP1Q9Y6X1 66 aa7.25□□□□□ -1.25
PFDN4-205ENST00000493356 TMEM258P61165 79 aa7.24□□□□□ -1.25
PFDN4-205ENST00000493356 A0A1B0GU33 70 aa7.2□□□□□ -1.26
PFDN4-205ENST00000493356 SPRR5A0A1B0GTR4 108 aa7.16□□□□□ -1.26
PFDN4-205ENST00000493356 TNP1P09430 55 aa7.11□□□□□ -1.27
PFDN4-205ENST00000493356 KRTAP5-5Q701N2 237 aaPredicted RBP7.11□□□□□ -1.27
PFDN4-205ENST00000493356 A0A1B0GU69 56 aa7.06□□□□□ -1.28
PFDN4-205ENST00000493356 PCP4P48539 62 aa7.04□□□□□ -1.28
PFDN4-205ENST00000493356 KRTAP12-4P60329 112 aa7.03□□□□□ -1.28
PFDN4-205ENST00000493356 SMIM26A0A096LP01 95 aa6.99□□□□□ -1.29
PFDN4-205ENST00000493356 KRTAP12-3P60328 96 aa6.99□□□□□ -1.29
PFDN4-205ENST00000493356 A8MU10 97 aa6.97□□□□□ -1.29
PFDN4-205ENST00000493356 PRR15LQ9BU68 103 aa6.97□□□□□ -1.29
PFDN4-205ENST00000493356 LINC01558Q9Y6Z2 57 aa6.94□□□□□ -1.3
PFDN4-205ENST00000493356 SYNE1Q8NF91 8797 aaKnown RBP6.91□□□□□ -1.3
PFDN4-205ENST00000493356 V9GYY9 64 aa6.78□□□□□ -1.32
PFDN4-205ENST00000493356 Q1T7F1 81 aa6.73□□□□□ -1.33
PFDN4-205ENST00000493356 UQCR11O14957 56 aa6.72□□□□□ -1.33
PFDN4-205ENST00000493356 PSPHP1O15172 72 aa6.71□□□□□ -1.34
PFDN4-205ENST00000493356 RPS28P62857 69 aaKnown RBP6.69□□□□□ -1.34
PFDN4-205ENST00000493356 MIR22HGQ0VDD5 57 aa6.61□□□□□ -1.35
PFDN4-205ENST00000493356 KRTAP5-2Q701N4 177 aa6.61□□□□□ -1.35
PFDN4-205ENST00000493356 KRTAP5-8O75690 187 aa6.54□□□□□ -1.36
PFDN4-205ENST00000493356 MUC5ACP98088 5654 aa6.53□□□□□ -1.36
PFDN4-205ENST00000493356 A6NED7 52 aa6.52□□□□□ -1.37
PFDN4-205ENST00000493356 AHNAKQ09666 5890 aaKnown RBP6.49□□□□□ -1.37
PFDN4-205ENST00000493356 MUC5BQ9HC84 5762 aaPredicted RBP6.47□□□□□ -1.37
PFDN4-205ENST00000493356 K7ERS5 55 aa6.45□□□□□ -1.38
PFDN4-205ENST00000493356 KRTAP6-1Q3LI64 71 aa6.45□□□□□ -1.38
PFDN4-205ENST00000493356 MT1AP04731 61 aa6.44□□□□□ -1.38
PFDN4-205ENST00000493356 KRTAP25-1Q3LHN0 102 aa6.43□□□□□ -1.38
PFDN4-205ENST00000493356 LCE3CQ5T5A8 94 aa6.38□□□□□ -1.39
PFDN4-205ENST00000493356 OBSCNQ5VST9 7968 aa6.36□□□□□ -1.39
PFDN4-205ENST00000493356 KRTAP15-1Q3LI76 137 aa6.34□□□□□ -1.39
PFDN4-205ENST00000493356 CDC42SE1Q9NRR8 79 aa6.27□□□□□ -1.41
PFDN4-205ENST00000493356 KRTAP6-2Q3LI66 62 aa6.26□□□□□ -1.41
PFDN4-205ENST00000493356 KRTAP23-1A1A580 65 aa6.15□□□□□ -1.42
PFDN4-205ENST00000493356 KRTAP9-6A8MVA2 160 aa6.07□□□□□ -1.44
PFDN4-205ENST00000493356 ROMO1P60602 79 aa6.05□□□□□ -1.44
PFDN4-205ENST00000493356 KRTAP5-1Q6L8H4 278 aa6.03□□□□□ -1.44
PFDN4-205ENST00000493356 BRK1Q8WUW1 75 aa6.02□□□□□ -1.45
PFDN4-205ENST00000493356 MT3P25713 68 aa5.9□□□□□ -1.46
PFDN4-205ENST00000493356 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.67□□□□□ -1.5
PFDN4-205ENST00000493356 PMAIP1Q13794 54 aa5.66□□□□□ -1.5
PFDN4-205ENST00000493356 LCE1EQ5T753 118 aa5.56□□□□□ -1.52
PFDN4-205ENST00000493356 PRO0628Q9UI54 55 aa5.55□□□□□ -1.52
PFDN4-205ENST00000493356 KRTAP5-11Q6L8G4 156 aa5.5□□□□□ -1.53
PFDN4-205ENST00000493356 PRAC1Q96KF2 57 aa5.37□□□□□ -1.55
PFDN4-205ENST00000493356 LCE1BQ5T7P3 118 aa5.28□□□□□ -1.56
PFDN4-205ENST00000493356 KTN1-AS1Q86SY8 53 aa5.23□□□□□ -1.57
PFDN4-205ENST00000493356 LCE1CQ5T751 118 aa5.16□□□□□ -1.58
PFDN4-205ENST00000493356 SVIPQ8NHG7 77 aa5.04□□□□□ -1.6
PFDN4-205ENST00000493356 LCE1FQ5T754 118 aa4.72□□□□□ -1.65
PFDN4-205ENST00000493356 KRTAP4-4Q9BYR3 166 aa4.71□□□□□ -1.66
PFDN4-205ENST00000493356 PHGR1C9JFL3 82 aa4.53□□□□□ -1.68
PFDN4-205ENST00000493356 LUZP6Q538Z0 58 aa4.5□□□□□ -1.69
PFDN4-205ENST00000493356 LCE3DQ9BYE3 92 aa4.48□□□□□ -1.69
PFDN4-205ENST00000493356 A0A0A0MQY5 61 aa4.43□□□□□ -1.7
PFDN4-205ENST00000493356 KRTAP21-2Q3LI59 83 aa4.26□□□□□ -1.73
PFDN4-205ENST00000493356 LCE3EQ5T5B0 92 aa4.12□□□□□ -1.75
PFDN4-205ENST00000493356 NDUFAF8A1L188 74 aa3.97□□□□□ -1.77
PFDN4-205ENST00000493356 MUC19Q7Z5P9 8384 aa3.94□□□□□ -1.78
PFDN4-205ENST00000493356 KRTAP21-1Q3LI58 79 aa3.44□□□□□ -1.86
PFDN4-205ENST00000493356 INE1O15225 51 aa3.23□□□□□ -1.89
PFDN4-205ENST00000493356 PRM1P04553 51 aa3.12□□□□□ -1.91
PFDN4-205ENST00000493356 MUC16Q8WXI7 14507 aa2.73□□□□□ -1.97
Retrieved 78 of 20,778 RNA–protein pairs in 163.8 ms