RNA–Protein interactions for RNA: ENST00000490667.1

SHC1-211, Transcript of SHC adaptor protein 1, humanhuman

TSL 2

Gene SHC1, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-211ENST00000490667 MT1LQ93083 61 aa4.68□□□□□ -1.66
SHC1-211ENST00000490667 KRTAP4-12Q9BQ66 201 aa4.68□□□□□ -1.66
SHC1-211ENST00000490667 MT1MQ8N339 61 aa4.66□□□□□ -1.66
SHC1-211ENST00000490667 DSTQ03001 7570 aaKnown RBP4.64□□□□□ -1.67
SHC1-211ENST00000490667 MIR22HGQ0VDD5 57 aa4.63□□□□□ -1.67
SHC1-211ENST00000490667 KRTAP4-9Q9BYQ8 210 aa4.61□□□□□ -1.67
SHC1-211ENST00000490667 V9GYY9 64 aa4.57□□□□□ -1.68
SHC1-211ENST00000490667 PSPHP1O15172 72 aa4.56□□□□□ -1.68
SHC1-211ENST00000490667 KRTAP12-3P60328 96 aa4.56□□□□□ -1.68
SHC1-211ENST00000490667 KRTAP4-3Q9BYR4 195 aa4.55□□□□□ -1.68
SHC1-211ENST00000490667 K7ERS5 55 aa4.54□□□□□ -1.68
SHC1-211ENST00000490667 Q1T7F1 81 aa4.54□□□□□ -1.68
SHC1-211ENST00000490667 KRTAP4-7Q9BYR0 210 aa4.54□□□□□ -1.68
SHC1-211ENST00000490667 KRTAP25-1Q3LHN0 102 aa4.52□□□□□ -1.69
SHC1-211ENST00000490667 LCE4AQ5TA78 99 aa4.51□□□□□ -1.69
SHC1-211ENST00000490667 LCE1DQ5T752 114 aa4.49□□□□□ -1.69
SHC1-211ENST00000490667 MT4P47944 62 aa4.45□□□□□ -1.7
SHC1-211ENST00000490667 KRTAP5-4Q6L8H1 288 aa4.42□□□□□ -1.7
SHC1-211ENST00000490667 A6NED7 52 aa4.4□□□□□ -1.71
SHC1-211ENST00000490667 KRTAP4-2Q9BYR5 136 aa4.38□□□□□ -1.71
SHC1-211ENST00000490667 HMCN1Q96RW7 5635 aa4.38□□□□□ -1.71
SHC1-211ENST00000490667 KRTAP23-1A1A580 65 aa4.36□□□□□ -1.71
SHC1-211ENST00000490667 GPR98Q8WXG9 6306 aa4.35□□□□□ -1.71
SHC1-211ENST00000490667 RPS28P62857 69 aaKnown RBP4.33□□□□□ -1.72
SHC1-211ENST00000490667 KRTAP19-4Q3LI73 84 aa4.32□□□□□ -1.72
SHC1-211ENST00000490667 CDC42SE1Q9NRR8 79 aa4.29□□□□□ -1.72
SHC1-211ENST00000490667 KRTAP15-1Q3LI76 137 aa4.28□□□□□ -1.72
SHC1-211ENST00000490667 PCP4P48539 62 aa4.26□□□□□ -1.73
SHC1-211ENST00000490667 KRTAP5-5Q701N2 237 aaPredicted RBP4.26□□□□□ -1.73
SHC1-211ENST00000490667 ROMO1P60602 79 aa4.24□□□□□ -1.73
SHC1-211ENST00000490667 LCE3CQ5T5A8 94 aa4.21□□□□□ -1.74
SHC1-211ENST00000490667 AHNAK2Q8IVF2 5795 aa4.18□□□□□ -1.74
SHC1-211ENST00000490667 KRTAP12-4P60329 112 aa4.17□□□□□ -1.74
SHC1-211ENST00000490667 KRTAP20-2Q3LI61 65 aa4.17□□□□□ -1.74
SHC1-211ENST00000490667 SPRR5A0A1B0GTR4 108 aa4.16□□□□□ -1.74
SHC1-211ENST00000490667 KRTAP5-10Q6L8G5 202 aa4.15□□□□□ -1.75
SHC1-211ENST00000490667 KRTAP4-11Q9BYQ6 195 aa4.15□□□□□ -1.75
SHC1-211ENST00000490667 KRTAP5-3Q6L8H2 238 aa4.14□□□□□ -1.75
SHC1-211ENST00000490667 SYNE1Q8NF91 8797 aaKnown RBP4.06□□□□□ -1.76
SHC1-211ENST00000490667 MT1AP04731 61 aa3.99□□□□□ -1.77
SHC1-211ENST00000490667 KRTAP5-7Q6L8G8 165 aa3.98□□□□□ -1.77
SHC1-211ENST00000490667 KRTAP9-6A8MVA2 160 aa3.96□□□□□ -1.78
SHC1-211ENST00000490667 KRTAP6-1Q3LI64 71 aa3.96□□□□□ -1.78
SHC1-211ENST00000490667 KRTAP5-2Q701N4 177 aa3.87□□□□□ -1.79
SHC1-211ENST00000490667 KRTAP6-2Q3LI66 62 aa3.78□□□□□ -1.8
SHC1-211ENST00000490667 BRK1Q8WUW1 75 aa3.78□□□□□ -1.8
SHC1-211ENST00000490667 KRTAP5-8O75690 187 aa3.67□□□□□ -1.82
SHC1-211ENST00000490667 MT3P25713 68 aa3.66□□□□□ -1.82
SHC1-211ENST00000490667 PMAIP1Q13794 54 aa3.57□□□□□ -1.84
SHC1-211ENST00000490667 OBSCNQ5VST9 7968 aa3.52□□□□□ -1.85
SHC1-211ENST00000490667 KRTAP5-1Q6L8H4 278 aa3.47□□□□□ -1.85
SHC1-211ENST00000490667 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
SHC1-211ENST00000490667 AHNAKQ09666 5890 aaKnown RBP3.44□□□□□ -1.86
SHC1-211ENST00000490667 PRAC1Q96KF2 57 aa3.43□□□□□ -1.86
SHC1-211ENST00000490667 MUC5ACP98088 5654 aa3.43□□□□□ -1.86
SHC1-211ENST00000490667 LCE1EQ5T753 118 aa3.35□□□□□ -1.87
SHC1-211ENST00000490667 PRO0628Q9UI54 55 aa3.27□□□□□ -1.89
SHC1-211ENST00000490667 LCE1BQ5T7P3 118 aa3.16□□□□□ -1.9
SHC1-211ENST00000490667 KTN1-AS1Q86SY8 53 aa3.13□□□□□ -1.91
SHC1-211ENST00000490667 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
SHC1-211ENST00000490667 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.05□□□□□ -1.92
SHC1-211ENST00000490667 LCE3DQ9BYE3 92 aa3.04□□□□□ -1.92
SHC1-211ENST00000490667 H3BS24 57 aa3.01□□□□□ -1.93
SHC1-211ENST00000490667 SVIPQ8NHG7 77 aa3.01□□□□□ -1.93
SHC1-211ENST00000490667 LUZP6Q538Z0 58 aa2.91□□□□□ -1.94
SHC1-211ENST00000490667 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
SHC1-211ENST00000490667 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
SHC1-211ENST00000490667 LCE1FQ5T754 118 aa2.72□□□□□ -1.97
SHC1-211ENST00000490667 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
SHC1-211ENST00000490667 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
SHC1-211ENST00000490667 PHGR1C9JFL3 82 aa2.42□□□□□ -2.02
SHC1-211ENST00000490667 NDUFAF8A1L188 74 aa2.31□□□□□ -2.04
SHC1-211ENST00000490667 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
SHC1-211ENST00000490667 PRM1P04553 51 aa2.16□□□□□ -2.06
SHC1-211ENST00000490667 A0A0A0MQY5 61 aa1.95□□□□□ -2.1
SHC1-211ENST00000490667 INE1O15225 51 aa1.85□□□□□ -2.11
SHC1-211ENST00000490667 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.11
SHC1-211ENST00000490667 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 1226 ms