RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 PRR15LQ9BU68 103 aa3.62□□□□□ -1.83
SNX17-207ENST00000489402 A0A1B0GU69 56 aa3.56□□□□□ -1.84
SNX17-207ENST00000489402 HMCN1Q96RW7 5635 aa3.54□□□□□ -1.84
SNX17-207ENST00000489402 CAMK2N1Q7Z7J9 78 aa3.54□□□□□ -1.84
SNX17-207ENST00000489402 KRTAP5-10Q6L8G5 202 aa3.53□□□□□ -1.84
SNX17-207ENST00000489402 SEC61GP60059 68 aa3.52□□□□□ -1.85
SNX17-207ENST00000489402 KRTAP19-7Q3SYF9 63 aa3.52□□□□□ -1.85
SNX17-207ENST00000489402 A6NED7 52 aa3.51□□□□□ -1.85
SNX17-207ENST00000489402 KRTAP5-7Q6L8G8 165 aa3.51□□□□□ -1.85
SNX17-207ENST00000489402 KRTAP19-3Q7Z4W3 81 aa3.51□□□□□ -1.85
SNX17-207ENST00000489402 BRK1Q8WUW1 75 aa3.51□□□□□ -1.85
SNX17-207ENST00000489402 CDC42SE1Q9NRR8 79 aa3.5□□□□□ -1.85
SNX17-207ENST00000489402 PRO0628Q9UI54 55 aa3.5□□□□□ -1.85
SNX17-207ENST00000489402 MT1EP04732 61 aa3.49□□□□□ -1.85
SNX17-207ENST00000489402 KRTAP13-4Q3LI77 160 aa3.49□□□□□ -1.85
SNX17-207ENST00000489402 SPATA8Q6RVD6 105 aa3.49□□□□□ -1.85
SNX17-207ENST00000489402 UQCR11O14957 56 aa3.48□□□□□ -1.85
SNX17-207ENST00000489402 A8MU10 97 aa3.47□□□□□ -1.85
SNX17-207ENST00000489402 A0A1B0GU33 70 aa3.46□□□□□ -1.86
SNX17-207ENST00000489402 MIR22HGQ0VDD5 57 aa3.44□□□□□ -1.86
SNX17-207ENST00000489402 PP632Q6XCG6 107 aa3.42□□□□□ -1.86
SNX17-207ENST00000489402 A0A0D9SG42 100 aa3.41□□□□□ -1.86
SNX17-207ENST00000489402 MT1GP13640 62 aa3.41□□□□□ -1.86
SNX17-207ENST00000489402 MT4P47944 62 aa3.39□□□□□ -1.87
SNX17-207ENST00000489402 KRTAP19-5Q3LI72 72 aa3.39□□□□□ -1.87
SNX17-207ENST00000489402 AHNAKQ09666 5890 aaKnown RBP3.38□□□□□ -1.87
SNX17-207ENST00000489402 SVIPQ8NHG7 77 aa3.36□□□□□ -1.87
SNX17-207ENST00000489402 SPINT4Q6UDR6 99 aa3.35□□□□□ -1.87
SNX17-207ENST00000489402 KRTAP4-3Q9BYR4 195 aa3.35□□□□□ -1.87
SNX17-207ENST00000489402 MT1MQ8N339 61 aa3.34□□□□□ -1.87
SNX17-207ENST00000489402 PMAIP1Q13794 54 aa3.33□□□□□ -1.88
SNX17-207ENST00000489402 MT1LQ93083 61 aa3.31□□□□□ -1.88
SNX17-207ENST00000489402 KRTAP12-1P59990 96 aa3.28□□□□□ -1.88
SNX17-207ENST00000489402 KRTAP5-4Q6L8H1 288 aa3.28□□□□□ -1.88
SNX17-207ENST00000489402 K7ERS5 55 aa3.26□□□□□ -1.89
SNX17-207ENST00000489402 C10orf95Q9H7T3 257 aa3.24□□□□□ -1.89
SNX17-207ENST00000489402 KTN1-AS1Q86SY8 53 aa3.23□□□□□ -1.89
SNX17-207ENST00000489402 LCE3AQ5TA76 89 aa3.22□□□□□ -1.89
SNX17-207ENST00000489402 TNP1P09430 55 aa3.21□□□□□ -1.9
SNX17-207ENST00000489402 MUC5BQ9HC84 5762 aaPredicted RBP3.18□□□□□ -1.9
SNX17-207ENST00000489402 ROMO1P60602 79 aa3.16□□□□□ -1.9
SNX17-207ENST00000489402 MUC5ACP98088 5654 aa3.14□□□□□ -1.91
SNX17-207ENST00000489402 KRTAP20-2Q3LI61 65 aa3.12□□□□□ -1.91
SNX17-207ENST00000489402 KRTAP12-3P60328 96 aa3.11□□□□□ -1.91
SNX17-207ENST00000489402 PRAC1Q96KF2 57 aa3.11□□□□□ -1.91
SNX17-207ENST00000489402 SYNE1Q8NF91 8797 aaKnown RBP3.1□□□□□ -1.91
SNX17-207ENST00000489402 KRTAP12-4P60329 112 aa3.07□□□□□ -1.92
SNX17-207ENST00000489402 KRTAP5-11Q6L8G4 156 aa3.07□□□□□ -1.92
SNX17-207ENST00000489402 KRTAP5-5Q701N2 237 aaPredicted RBP3.07□□□□□ -1.92
SNX17-207ENST00000489402 KRTAP25-1Q3LHN0 102 aa3.06□□□□□ -1.92
SNX17-207ENST00000489402 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.05□□□□□ -1.92
SNX17-207ENST00000489402 MT3P25713 68 aa3.02□□□□□ -1.93
SNX17-207ENST00000489402 LCE1EQ5T753 118 aa3.01□□□□□ -1.93
SNX17-207ENST00000489402 A0A0A0MQY5 61 aa2.92□□□□□ -1.94
SNX17-207ENST00000489402 LCE3CQ5T5A8 94 aa2.84□□□□□ -1.95
SNX17-207ENST00000489402 KRTAP5-2Q701N4 177 aa2.84□□□□□ -1.95
SNX17-207ENST00000489402 MT1AP04731 61 aa2.83□□□□□ -1.96
SNX17-207ENST00000489402 KRTAP6-1Q3LI64 71 aa2.83□□□□□ -1.96
SNX17-207ENST00000489402 KRTAP5-8O75690 187 aa2.8□□□□□ -1.96
SNX17-207ENST00000489402 OBSCNQ5VST9 7968 aa2.78□□□□□ -1.97
SNX17-207ENST00000489402 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
SNX17-207ENST00000489402 KRTAP9-6A8MVA2 160 aa2.74□□□□□ -1.97
SNX17-207ENST00000489402 KRTAP6-2Q3LI66 62 aa2.72□□□□□ -1.97
SNX17-207ENST00000489402 KRTAP5-1Q6L8H4 278 aa2.63□□□□□ -1.99
SNX17-207ENST00000489402 KRTAP4-4Q9BYR3 166 aa2.51□□□□□ -2.01
SNX17-207ENST00000489402 NDUFAF8A1L188 74 aa2.5□□□□□ -2.01
SNX17-207ENST00000489402 LUZP6Q538Z0 58 aa2.5□□□□□ -2.01
SNX17-207ENST00000489402 LCE3EQ5T5B0 92 aa2.34□□□□□ -2.03
SNX17-207ENST00000489402 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
SNX17-207ENST00000489402 LCE1CQ5T751 118 aa2.24□□□□□ -2.05
SNX17-207ENST00000489402 PHGR1C9JFL3 82 aa2.15□□□□□ -2.07
SNX17-207ENST00000489402 INE1O15225 51 aa2.09□□□□□ -2.07
SNX17-207ENST00000489402 LCE3DQ9BYE3 92 aa2.02□□□□□ -2.09
SNX17-207ENST00000489402 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
SNX17-207ENST00000489402 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
SNX17-207ENST00000489402 PRM1P04553 51 aa1.64□□□□□ -2.15
SNX17-207ENST00000489402 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
SNX17-207ENST00000489402 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 113.8 ms