RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 P0C880 135 aa1.04□□□□□ -2.24
DEPDC1-203ENST00000488146 VPS25Q9BRG1 176 aa1.04□□□□□ -2.24
DEPDC1-203ENST00000488146 DMAC1Q96GE9 116 aa1.04□□□□□ -2.24
DEPDC1-203ENST00000488146 C14orf144Q96I85 54 aa1.04□□□□□ -2.24
DEPDC1-203ENST00000488146 C14orf132Q9NPU4 83 aa1.03□□□□□ -2.24
DEPDC1-203ENST00000488146 MT1EP04732 61 aa1.03□□□□□ -2.24
DEPDC1-203ENST00000488146 SMIM6P0DI80 62 aa1.03□□□□□ -2.24
DEPDC1-203ENST00000488146 PYY3Q5JQD4 70 aa1.02□□□□□ -2.25
DEPDC1-203ENST00000488146 A0A1W2PPM0 123 aa1.02□□□□□ -2.25
DEPDC1-203ENST00000488146 K7ERJ3 54 aa1.02□□□□□ -2.25
DEPDC1-203ENST00000488146 TMEM258P61165 79 aa1.01□□□□□ -2.25
DEPDC1-203ENST00000488146 KRTAP19-7Q3SYF9 63 aa1.01□□□□□ -2.25
DEPDC1-203ENST00000488146 H0Y9P7 68 aa1□□□□□ -2.25
DEPDC1-203ENST00000488146 LINC01554Q52M75 96 aa1□□□□□ -2.25
DEPDC1-203ENST00000488146 F8W1H4 67 aa0.99□□□□□ -2.25
DEPDC1-203ENST00000488146 KTN1-AS1Q86SY8 53 aa0.99□□□□□ -2.25
DEPDC1-203ENST00000488146 MT1MQ8N339 61 aa0.99□□□□□ -2.25
DEPDC1-203ENST00000488146 K7EP34 96 aa0.98□□□□□ -2.25
DEPDC1-203ENST00000488146 ACYP2P14621 99 aa0.98□□□□□ -2.25
DEPDC1-203ENST00000488146 GTF2H5Q6ZYL4 71 aa0.97□□□□□ -2.25
DEPDC1-203ENST00000488146 LINC00643Q86TS7 51 aa0.97□□□□□ -2.25
DEPDC1-203ENST00000488146 A0A1B0GV72 72 aa0.96□□□□□ -2.26
DEPDC1-203ENST00000488146 A0A087WVE0 104 aa0.96□□□□□ -2.26
DEPDC1-203ENST00000488146 MT1LQ93083 61 aa0.96□□□□□ -2.26
DEPDC1-203ENST00000488146 SPCS1Q9Y6A9 102 aa0.96□□□□□ -2.26
DEPDC1-203ENST00000488146 KRTAP12-1P59990 96 aa0.95□□□□□ -2.26
DEPDC1-203ENST00000488146 KRTAP20-2Q3LI61 65 aa0.95□□□□□ -2.26
DEPDC1-203ENST00000488146 COL5A1-AS1Q5SY13 56 aa0.95□□□□□ -2.26
DEPDC1-203ENST00000488146 LOC105371267A0A1B0GV96 52 aa0.94□□□□□ -2.26
DEPDC1-203ENST00000488146 KRTAP12-4P60329 112 aa0.94□□□□□ -2.26
DEPDC1-203ENST00000488146 MT-ATP8P03928 68 aa0.93□□□□□ -2.26
DEPDC1-203ENST00000488146 HIST1H4AP62805 103 aaKnown RBP0.92□□□□□ -2.26
DEPDC1-203ENST00000488146 LCE1CQ5T751 118 aa0.92□□□□□ -2.26
DEPDC1-203ENST00000488146 LCE1BQ5T7P3 118 aa0.92□□□□□ -2.26
DEPDC1-203ENST00000488146 SCGB1A1P11684 91 aa0.92□□□□□ -2.26
DEPDC1-203ENST00000488146 KRTAP12-3P60328 96 aa0.92□□□□□ -2.26
DEPDC1-203ENST00000488146 COA5Q86WW8 74 aa0.92□□□□□ -2.26
DEPDC1-203ENST00000488146 TNP1P09430 55 aa0.91□□□□□ -2.26
DEPDC1-203ENST00000488146 KRTAP19-5Q3LI72 72 aa0.91□□□□□ -2.26
DEPDC1-203ENST00000488146 LINC00208Q96KT6 92 aa0.91□□□□□ -2.26
DEPDC1-203ENST00000488146 Q1T7F1 81 aa0.9□□□□□ -2.27
DEPDC1-203ENST00000488146 BRK1Q8WUW1 75 aa0.9□□□□□ -2.27
DEPDC1-203ENST00000488146 KRTAP13-4Q3LI77 160 aa0.89□□□□□ -2.27
DEPDC1-203ENST00000488146 MT4P47944 62 aa0.88□□□□□ -2.27
DEPDC1-203ENST00000488146 ROMO1P60602 79 aa0.88□□□□□ -2.27
DEPDC1-203ENST00000488146 A0A0D9SG42 100 aa0.88□□□□□ -2.27
DEPDC1-203ENST00000488146 CHKB-CPT1BH3BT56 60 aa0.88□□□□□ -2.27
DEPDC1-203ENST00000488146 J3QR89 54 aa0.88□□□□□ -2.27
DEPDC1-203ENST00000488146 MT1AP04731 61 aa0.88□□□□□ -2.27
DEPDC1-203ENST00000488146 SERP1Q9Y6X1 66 aa0.87□□□□□ -2.27
DEPDC1-203ENST00000488146 PRR15LQ9BU68 103 aa0.86□□□□□ -2.27
DEPDC1-203ENST00000488146 ETDBQ3ZM63 59 aa0.84□□□□□ -2.27
DEPDC1-203ENST00000488146 CDC42SE1Q9NRR8 79 aa0.84□□□□□ -2.27
DEPDC1-203ENST00000488146 ATP5EP56381 51 aaPredicted RBP0.83□□□□□ -2.28
DEPDC1-203ENST00000488146 MIR22HGQ0VDD5 57 aa0.82□□□□□ -2.28
DEPDC1-203ENST00000488146 H7BZZ5 65 aa0.81□□□□□ -2.28
DEPDC1-203ENST00000488146 SERP2Q8N6R1 65 aa0.81□□□□□ -2.28
DEPDC1-203ENST00000488146 MUC19Q7Z5P9 8384 aa0.78□□□□□ -2.29
DEPDC1-203ENST00000488146 K7ERU9 68 aa0.78□□□□□ -2.29
DEPDC1-203ENST00000488146 RPS28P62857 69 aaKnown RBP0.78□□□□□ -2.29
DEPDC1-203ENST00000488146 A0A1B0GU69 56 aa0.77□□□□□ -2.29
DEPDC1-203ENST00000488146 SNURFQ9Y675 71 aa0.77□□□□□ -2.29
DEPDC1-203ENST00000488146 LINC01558Q9Y6Z2 57 aa0.77□□□□□ -2.29
DEPDC1-203ENST00000488146 COX7CP15954 63 aa0.75□□□□□ -2.29
DEPDC1-203ENST00000488146 KRTAP6-1Q3LI64 71 aa0.75□□□□□ -2.29
DEPDC1-203ENST00000488146 UQCR11O14957 56 aa0.73□□□□□ -2.29
DEPDC1-203ENST00000488146 KRTAP6-2Q3LI66 62 aa0.73□□□□□ -2.29
DEPDC1-203ENST00000488146 SPATA8Q6RVD6 105 aa0.72□□□□□ -2.29
DEPDC1-203ENST00000488146 A0A1B0GV90 55 aa0.71□□□□□ -2.29
DEPDC1-203ENST00000488146 INE1O15225 51 aa0.7□□□□□ -2.3
DEPDC1-203ENST00000488146 DSTQ03001 7570 aaKnown RBP0.7□□□□□ -2.3
DEPDC1-203ENST00000488146 KRTAP21-2Q3LI59 83 aa0.67□□□□□ -2.3
DEPDC1-203ENST00000488146 CCDC179H3BU77 68 aa0.66□□□□□ -2.3
DEPDC1-203ENST00000488146 SYNE1Q8NF91 8797 aaKnown RBP0.63□□□□□ -2.31
DEPDC1-203ENST00000488146 PHGR1C9JFL3 82 aa0.57□□□□□ -2.32
DEPDC1-203ENST00000488146 KRTAP21-1Q3LI58 79 aa0.54□□□□□ -2.32
DEPDC1-203ENST00000488146 MUC16Q8WXI7 14507 aa0.53□□□□□ -2.32
DEPDC1-203ENST00000488146 PRM1P04553 51 aa0.23□□□□□ -2.37
Retrieved 78 of 20,778 RNA–protein pairs in 245.3 ms