RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 MIR22HGQ0VDD5 57 aa8.38□□□□□ -1.07
RNF38-208ENST00000488058 KRTAP4-9Q9BYQ8 210 aa8.31□□□□□ -1.08
RNF38-208ENST00000488058 PSPHP1O15172 72 aa8.27□□□□□ -1.09
RNF38-208ENST00000488058 V9GYY9 64 aa8.25□□□□□ -1.09
RNF38-208ENST00000488058 KRTAP4-3Q9BYR4 195 aa8.24□□□□□ -1.09
RNF38-208ENST00000488058 K7ERS5 55 aa8.22□□□□□ -1.09
RNF38-208ENST00000488058 KRTAP12-3P60328 96 aa8.22□□□□□ -1.09
RNF38-208ENST00000488058 Q1T7F1 81 aa8.17□□□□□ -1.1
RNF38-208ENST00000488058 KRTAP25-1Q3LHN0 102 aa8.14□□□□□ -1.11
RNF38-208ENST00000488058 LCE1DQ5T752 114 aa8.1□□□□□ -1.11
RNF38-208ENST00000488058 LCE4AQ5TA78 99 aa8.1□□□□□ -1.11
RNF38-208ENST00000488058 KRTAP4-7Q9BYR0 210 aa8.08□□□□□ -1.12
RNF38-208ENST00000488058 MT4P47944 62 aa8.07□□□□□ -1.12
RNF38-208ENST00000488058 A6NED7 52 aa7.99□□□□□ -1.13
RNF38-208ENST00000488058 KRTAP5-4Q6L8H1 288 aa7.92□□□□□ -1.14
RNF38-208ENST00000488058 HMCN1Q96RW7 5635 aa7.86□□□□□ -1.15
RNF38-208ENST00000488058 KRTAP4-6Q9BYQ5 205 aa7.8□□□□□ -1.16
RNF38-208ENST00000488058 KRTAP23-1A1A580 65 aa7.78□□□□□ -1.16
RNF38-208ENST00000488058 CDC42SE1Q9NRR8 79 aa7.78□□□□□ -1.16
RNF38-208ENST00000488058 RPS28P62857 69 aaKnown RBP7.74□□□□□ -1.17
RNF38-208ENST00000488058 PCP4P48539 62 aa7.72□□□□□ -1.17
RNF38-208ENST00000488058 KRTAP15-1Q3LI76 137 aa7.7□□□□□ -1.18
RNF38-208ENST00000488058 AHNAK2Q8IVF2 5795 aa7.69□□□□□ -1.18
RNF38-208ENST00000488058 KRTAP19-4Q3LI73 84 aa7.67□□□□□ -1.18
RNF38-208ENST00000488058 KRTAP5-10Q6L8G5 202 aa7.66□□□□□ -1.18
RNF38-208ENST00000488058 ROMO1P60602 79 aa7.65□□□□□ -1.18
RNF38-208ENST00000488058 KRTAP5-5Q701N2 237 aaPredicted RBP7.65□□□□□ -1.18
RNF38-208ENST00000488058 LOC100996750A0A140TA64 210 aa7.64□□□□□ -1.19
RNF38-208ENST00000488058 LCE3CQ5T5A8 94 aa7.57□□□□□ -1.2
RNF38-208ENST00000488058 KRTAP20-2Q3LI61 65 aa7.51□□□□□ -1.21
RNF38-208ENST00000488058 KRTAP12-4P60329 112 aa7.49□□□□□ -1.21
RNF38-208ENST00000488058 KRTAP5-7Q6L8G8 165 aa7.47□□□□□ -1.21
RNF38-208ENST00000488058 SPRR5A0A1B0GTR4 108 aa7.46□□□□□ -1.22
RNF38-208ENST00000488058 SYNE1Q8NF91 8797 aaKnown RBP7.39□□□□□ -1.23
RNF38-208ENST00000488058 KRTAP5-3Q6L8H2 238 aa7.34□□□□□ -1.23
RNF38-208ENST00000488058 MT1AP04731 61 aa7.19□□□□□ -1.26
RNF38-208ENST00000488058 KRTAP6-1Q3LI64 71 aa7.16□□□□□ -1.26
RNF38-208ENST00000488058 KRTAP9-6A8MVA2 160 aa7.13□□□□□ -1.27
RNF38-208ENST00000488058 KRTAP5-2Q701N4 177 aa6.95□□□□□ -1.3
RNF38-208ENST00000488058 KRTAP9-4Q9BYQ2 154 aa6.94□□□□□ -1.3
RNF38-208ENST00000488058 BRK1Q8WUW1 75 aa6.9□□□□□ -1.3
RNF38-208ENST00000488058 KRTAP4-11Q9BYQ6 195 aa6.84□□□□□ -1.31
RNF38-208ENST00000488058 KRTAP6-2Q3LI66 62 aa6.83□□□□□ -1.32
RNF38-208ENST00000488058 KRTAP5-8O75690 187 aa6.6□□□□□ -1.35
RNF38-208ENST00000488058 MT3P25713 68 aa6.58□□□□□ -1.36
RNF38-208ENST00000488058 OBSCNQ5VST9 7968 aa6.55□□□□□ -1.36
RNF38-208ENST00000488058 AHNAKQ09666 5890 aaKnown RBP6.48□□□□□ -1.37
RNF38-208ENST00000488058 MUC5ACP98088 5654 aa6.47□□□□□ -1.37
RNF38-208ENST00000488058 PMAIP1Q13794 54 aa6.46□□□□□ -1.38
RNF38-208ENST00000488058 MUC5BQ9HC84 5762 aaPredicted RBP6.41□□□□□ -1.38
RNF38-208ENST00000488058 KRTAP9-9Q9BYP9 154 aa6.28□□□□□ -1.4
RNF38-208ENST00000488058 PRAC1Q96KF2 57 aa6.26□□□□□ -1.41
RNF38-208ENST00000488058 KRTAP5-1Q6L8H4 278 aa6.23□□□□□ -1.41
RNF38-208ENST00000488058 LCE1EQ5T753 118 aa5.97□□□□□ -1.45
RNF38-208ENST00000488058 PRO0628Q9UI54 55 aa5.93□□□□□ -1.46
RNF38-208ENST00000488058 LCE1BQ5T7P3 118 aa5.73□□□□□ -1.49
RNF38-208ENST00000488058 KTN1-AS1Q86SY8 53 aa5.7□□□□□ -1.5
RNF38-208ENST00000488058 KRTAP4-12Q9BQ66 201 aa5.66□□□□□ -1.5
RNF38-208ENST00000488058 KRTAP4-2Q9BYR5 136 aa5.66□□□□□ -1.5
RNF38-208ENST00000488058 SVIPQ8NHG7 77 aa5.58□□□□□ -1.52
RNF38-208ENST00000488058 LCE1CQ5T751 118 aa5.55□□□□□ -1.52
RNF38-208ENST00000488058 LCE3DQ9BYE3 92 aa5.47□□□□□ -1.53
RNF38-208ENST00000488058 LUZP6Q538Z0 58 aa5.28□□□□□ -1.56
RNF38-208ENST00000488058 LCE3EQ5T5B0 92 aa5.17□□□□□ -1.58
RNF38-208ENST00000488058 KRTAP5-11Q6L8G4 156 aa5.03□□□□□ -1.6
RNF38-208ENST00000488058 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.03□□□□□ -1.6
RNF38-208ENST00000488058 LCE1FQ5T754 118 aa4.86□□□□□ -1.63
RNF38-208ENST00000488058 KRTAP21-2Q3LI59 83 aa4.68□□□□□ -1.66
RNF38-208ENST00000488058 PHGR1C9JFL3 82 aa4.52□□□□□ -1.69
RNF38-208ENST00000488058 H3BS24 57 aa4.43□□□□□ -1.7
RNF38-208ENST00000488058 KRTAP4-4Q9BYR3 166 aa4.36□□□□□ -1.71
RNF38-208ENST00000488058 NDUFAF8A1L188 74 aa4.21□□□□□ -1.74
RNF38-208ENST00000488058 MUC19Q7Z5P9 8384 aa4.03□□□□□ -1.76
RNF38-208ENST00000488058 PRM1P04553 51 aa3.94□□□□□ -1.78
RNF38-208ENST00000488058 KRTAP21-1Q3LI58 79 aa3.46□□□□□ -1.86
RNF38-208ENST00000488058 INE1O15225 51 aa3.32□□□□□ -1.88
RNF38-208ENST00000488058 A0A0A0MQY5 61 aa3.27□□□□□ -1.89
RNF38-208ENST00000488058 MUC16Q8WXI7 14507 aa2.85□□□□□ -1.95
Retrieved 78 of 20,778 RNA–protein pairs in 123.2 ms