RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 A0A0D9SG42 100 aa5.37□□□□□ -1.55
PFDN4-204ENST00000487129 SPATA8Q6RVD6 105 aa5.36□□□□□ -1.55
PFDN4-204ENST00000487129 MT1MQ8N339 61 aa5.36□□□□□ -1.55
PFDN4-204ENST00000487129 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.34□□□□□ -1.55
PFDN4-204ENST00000487129 ANAPC13Q9BS18 74 aa5.33□□□□□ -1.56
PFDN4-204ENST00000487129 KRTAP23-1A1A580 65 aa5.32□□□□□ -1.56
PFDN4-204ENST00000487129 KRTAP19-5Q3LI72 72 aa5.32□□□□□ -1.56
PFDN4-204ENST00000487129 PP632Q6XCG6 107 aa5.32□□□□□ -1.56
PFDN4-204ENST00000487129 SPINT4Q6UDR6 99 aa5.3□□□□□ -1.56
PFDN4-204ENST00000487129 KRTAP12-1P59990 96 aa5.29□□□□□ -1.56
PFDN4-204ENST00000487129 KRTAP4-3Q9BYR4 195 aa5.29□□□□□ -1.56
PFDN4-204ENST00000487129 A0A1B0GU69 56 aa5.28□□□□□ -1.56
PFDN4-204ENST00000487129 MT1LQ93083 61 aa5.26□□□□□ -1.57
PFDN4-204ENST00000487129 SMIM26A0A096LP01 95 aa5.25□□□□□ -1.57
PFDN4-204ENST00000487129 CCDC179H3BU77 68 aa5.22□□□□□ -1.57
PFDN4-204ENST00000487129 SPRR5A0A1B0GTR4 108 aa5.2□□□□□ -1.58
PFDN4-204ENST00000487129 ATP5EP56381 51 aaPredicted RBP5.19□□□□□ -1.58
PFDN4-204ENST00000487129 KRTAP20-2Q3LI61 65 aa5.17□□□□□ -1.58
PFDN4-204ENST00000487129 A8MU10 97 aa5.16□□□□□ -1.58
PFDN4-204ENST00000487129 PRR15LQ9BU68 103 aa5.14□□□□□ -1.59
PFDN4-204ENST00000487129 KRTAP5-11Q6L8G4 156 aa5.13□□□□□ -1.59
PFDN4-204ENST00000487129 LINC01558Q9Y6Z2 57 aa5.1□□□□□ -1.59
PFDN4-204ENST00000487129 C10orf95Q9H7T3 257 aa5.06□□□□□ -1.6
PFDN4-204ENST00000487129 TNP1P09430 55 aa5.05□□□□□ -1.6
PFDN4-204ENST00000487129 TMEM258P61165 79 aa5.04□□□□□ -1.6
PFDN4-204ENST00000487129 KRTAP5-5Q701N2 237 aaPredicted RBP5.02□□□□□ -1.61
PFDN4-204ENST00000487129 LCE3AQ5TA76 89 aa5□□□□□ -1.61
PFDN4-204ENST00000487129 UQCR11O14957 56 aa4.97□□□□□ -1.61
PFDN4-204ENST00000487129 KRTAP12-4P60329 112 aa4.9□□□□□ -1.63
PFDN4-204ENST00000487129 SYNE1Q8NF91 8797 aaKnown RBP4.87□□□□□ -1.63
PFDN4-204ENST00000487129 MIR22HGQ0VDD5 57 aa4.85□□□□□ -1.63
PFDN4-204ENST00000487129 KRTAP12-3P60328 96 aa4.82□□□□□ -1.64
PFDN4-204ENST00000487129 MUC5ACP98088 5654 aa4.81□□□□□ -1.64
PFDN4-204ENST00000487129 AHNAKQ09666 5890 aaKnown RBP4.81□□□□□ -1.64
PFDN4-204ENST00000487129 V9GYY9 64 aa4.8□□□□□ -1.64
PFDN4-204ENST00000487129 KRTAP25-1Q3LHN0 102 aa4.78□□□□□ -1.64
PFDN4-204ENST00000487129 K7ERS5 55 aa4.77□□□□□ -1.65
PFDN4-204ENST00000487129 LCE1EQ5T753 118 aa4.77□□□□□ -1.65
PFDN4-204ENST00000487129 Q1T7F1 81 aa4.76□□□□□ -1.65
PFDN4-204ENST00000487129 MUC5BQ9HC84 5762 aaPredicted RBP4.75□□□□□ -1.65
PFDN4-204ENST00000487129 PSPHP1O15172 72 aa4.73□□□□□ -1.65
PFDN4-204ENST00000487129 KRTAP5-8O75690 187 aa4.72□□□□□ -1.65
PFDN4-204ENST00000487129 KRTAP5-2Q701N4 177 aa4.7□□□□□ -1.66
PFDN4-204ENST00000487129 KRTAP5-1Q6L8H4 278 aa4.62□□□□□ -1.67
PFDN4-204ENST00000487129 A6NED7 52 aa4.58□□□□□ -1.68
PFDN4-204ENST00000487129 OBSCNQ5VST9 7968 aa4.57□□□□□ -1.68
PFDN4-204ENST00000487129 RPS28P62857 69 aaKnown RBP4.53□□□□□ -1.68
PFDN4-204ENST00000487129 CDC42SE1Q9NRR8 79 aa4.5□□□□□ -1.69
PFDN4-204ENST00000487129 KRTAP6-1Q3LI64 71 aa4.48□□□□□ -1.69
PFDN4-204ENST00000487129 KRTAP4-4Q9BYR3 166 aa4.47□□□□□ -1.69
PFDN4-204ENST00000487129 MT1AP04731 61 aa4.45□□□□□ -1.7
PFDN4-204ENST00000487129 LCE3CQ5T5A8 94 aa4.45□□□□□ -1.7
PFDN4-204ENST00000487129 ROMO1P60602 79 aa4.44□□□□□ -1.7
PFDN4-204ENST00000487129 PCP4P48539 62 aa4.38□□□□□ -1.71
PFDN4-204ENST00000487129 KRTAP6-2Q3LI66 62 aa4.37□□□□□ -1.71
PFDN4-204ENST00000487129 KRTAP9-6A8MVA2 160 aa4.18□□□□□ -1.74
PFDN4-204ENST00000487129 MT3P25713 68 aa4.09□□□□□ -1.75
PFDN4-204ENST00000487129 SVIPQ8NHG7 77 aa4.05□□□□□ -1.76
PFDN4-204ENST00000487129 A0A0A0MQY5 61 aa3.93□□□□□ -1.78
PFDN4-204ENST00000487129 BRK1Q8WUW1 75 aa3.9□□□□□ -1.79
PFDN4-204ENST00000487129 PMAIP1Q13794 54 aa3.69□□□□□ -1.82
PFDN4-204ENST00000487129 LCE1BQ5T7P3 118 aa3.67□□□□□ -1.82
PFDN4-204ENST00000487129 LCE1CQ5T751 118 aa3.62□□□□□ -1.83
PFDN4-204ENST00000487129 PRAC1Q96KF2 57 aa3.53□□□□□ -1.84
PFDN4-204ENST00000487129 LCE1FQ5T754 118 aa3.47□□□□□ -1.85
PFDN4-204ENST00000487129 PRO0628Q9UI54 55 aa3.39□□□□□ -1.87
PFDN4-204ENST00000487129 NDUFAF8A1L188 74 aa3.32□□□□□ -1.88
PFDN4-204ENST00000487129 PHGR1C9JFL3 82 aa3.28□□□□□ -1.88
PFDN4-204ENST00000487129 KTN1-AS1Q86SY8 53 aa3.24□□□□□ -1.89
PFDN4-204ENST00000487129 LCE3DQ9BYE3 92 aa3.21□□□□□ -1.9
PFDN4-204ENST00000487129 LCE3EQ5T5B0 92 aa3.06□□□□□ -1.92
PFDN4-204ENST00000487129 LUZP6Q538Z0 58 aa3.03□□□□□ -1.92
PFDN4-204ENST00000487129 KRTAP21-2Q3LI59 83 aa2.98□□□□□ -1.93
PFDN4-204ENST00000487129 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
PFDN4-204ENST00000487129 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
PFDN4-204ENST00000487129 PRM1P04553 51 aa2.25□□□□□ -2.05
PFDN4-204ENST00000487129 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
PFDN4-204ENST00000487129 INE1O15225 51 aa1.92□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 407.5 ms