RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 LCE1DQ5T752 114 aa6.66□□□□□ -1.34
CLIP2-206ENST00000487091 KRTAP4-3Q9BYR4 195 aa6.59□□□□□ -1.35
CLIP2-206ENST00000487091 UQCR11O14957 56 aa6.56□□□□□ -1.36
CLIP2-206ENST00000487091 MT4P47944 62 aa6.56□□□□□ -1.36
CLIP2-206ENST00000487091 TMEM258P61165 79 aa6.54□□□□□ -1.36
CLIP2-206ENST00000487091 KRTAP5-4Q6L8H1 288 aa6.54□□□□□ -1.36
CLIP2-206ENST00000487091 KRTAP12-3P60328 96 aa6.52□□□□□ -1.37
CLIP2-206ENST00000487091 HMCN1Q96RW7 5635 aa6.51□□□□□ -1.37
CLIP2-206ENST00000487091 KRTAP4-7Q9BYR0 210 aa6.42□□□□□ -1.38
CLIP2-206ENST00000487091 MIR22HGQ0VDD5 57 aa6.38□□□□□ -1.39
CLIP2-206ENST00000487091 KRTAP25-1Q3LHN0 102 aa6.38□□□□□ -1.39
CLIP2-206ENST00000487091 KRTAP4-6Q9BYQ5 205 aa6.38□□□□□ -1.39
CLIP2-206ENST00000487091 K7ERS5 55 aa6.3□□□□□ -1.4
CLIP2-206ENST00000487091 AHNAK2Q8IVF2 5795 aa6.27□□□□□ -1.41
CLIP2-206ENST00000487091 PSPHP1O15172 72 aa6.24□□□□□ -1.41
CLIP2-206ENST00000487091 KRTAP5-10Q6L8G5 202 aa6.24□□□□□ -1.41
CLIP2-206ENST00000487091 KRTAP5-5Q701N2 237 aaPredicted RBP6.24□□□□□ -1.41
CLIP2-206ENST00000487091 V9GYY9 64 aa6.24□□□□□ -1.41
CLIP2-206ENST00000487091 KRTAP19-4Q3LI73 84 aa6.22□□□□□ -1.41
CLIP2-206ENST00000487091 KRTAP23-1A1A580 65 aa6.17□□□□□ -1.42
CLIP2-206ENST00000487091 Q1T7F1 81 aa6.17□□□□□ -1.42
CLIP2-206ENST00000487091 KRTAP20-2Q3LI61 65 aa6.15□□□□□ -1.42
CLIP2-206ENST00000487091 SPRR5A0A1B0GTR4 108 aa6.14□□□□□ -1.43
CLIP2-206ENST00000487091 KRTAP12-4P60329 112 aa6.11□□□□□ -1.43
CLIP2-206ENST00000487091 LOC100996750A0A140TA64 210 aa6.09□□□□□ -1.43
CLIP2-206ENST00000487091 KRTAP5-3Q6L8H2 238 aa6.09□□□□□ -1.43
CLIP2-206ENST00000487091 KRTAP15-1Q3LI76 137 aa6.08□□□□□ -1.44
CLIP2-206ENST00000487091 KRTAP5-7Q6L8G8 165 aa6.02□□□□□ -1.45
CLIP2-206ENST00000487091 LCE3CQ5T5A8 94 aa6□□□□□ -1.45
CLIP2-206ENST00000487091 A6NED7 52 aa5.99□□□□□ -1.45
CLIP2-206ENST00000487091 CDC42SE1Q9NRR8 79 aa5.94□□□□□ -1.46
CLIP2-206ENST00000487091 SYNE1Q8NF91 8797 aaKnown RBP5.93□□□□□ -1.46
CLIP2-206ENST00000487091 ROMO1P60602 79 aa5.84□□□□□ -1.47
CLIP2-206ENST00000487091 MT1AP04731 61 aa5.78□□□□□ -1.48
CLIP2-206ENST00000487091 RPS28P62857 69 aaKnown RBP5.78□□□□□ -1.48
CLIP2-206ENST00000487091 KRTAP6-1Q3LI64 71 aa5.74□□□□□ -1.49
CLIP2-206ENST00000487091 PCP4P48539 62 aa5.72□□□□□ -1.49
CLIP2-206ENST00000487091 KRTAP5-2Q701N4 177 aa5.71□□□□□ -1.5
CLIP2-206ENST00000487091 KRTAP4-11Q9BYQ6 195 aa5.65□□□□□ -1.5
CLIP2-206ENST00000487091 KRTAP9-6A8MVA2 160 aa5.64□□□□□ -1.51
CLIP2-206ENST00000487091 KRTAP9-4Q9BYQ2 154 aa5.61□□□□□ -1.51
CLIP2-206ENST00000487091 KRTAP6-2Q3LI66 62 aa5.5□□□□□ -1.53
CLIP2-206ENST00000487091 KRTAP5-8O75690 187 aa5.45□□□□□ -1.54
CLIP2-206ENST00000487091 OBSCNQ5VST9 7968 aa5.37□□□□□ -1.55
CLIP2-206ENST00000487091 MT3P25713 68 aa5.3□□□□□ -1.56
CLIP2-206ENST00000487091 KRTAP9-9Q9BYP9 154 aa5.19□□□□□ -1.58
CLIP2-206ENST00000487091 MUC5BQ9HC84 5762 aaPredicted RBP5.17□□□□□ -1.58
CLIP2-206ENST00000487091 MUC5ACP98088 5654 aa5.16□□□□□ -1.58
CLIP2-206ENST00000487091 AHNAKQ09666 5890 aaKnown RBP5.13□□□□□ -1.59
CLIP2-206ENST00000487091 KRTAP5-1Q6L8H4 278 aa5.13□□□□□ -1.59
CLIP2-206ENST00000487091 BRK1Q8WUW1 75 aa5.11□□□□□ -1.59
CLIP2-206ENST00000487091 SVIPQ8NHG7 77 aa5.01□□□□□ -1.61
CLIP2-206ENST00000487091 LCE1EQ5T753 118 aa4.91□□□□□ -1.62
CLIP2-206ENST00000487091 PMAIP1Q13794 54 aa4.8□□□□□ -1.64
CLIP2-206ENST00000487091 PRAC1Q96KF2 57 aa4.69□□□□□ -1.66
CLIP2-206ENST00000487091 KRTAP4-2Q9BYR5 136 aa4.62□□□□□ -1.67
CLIP2-206ENST00000487091 LCE1BQ5T7P3 118 aa4.58□□□□□ -1.68
CLIP2-206ENST00000487091 PRO0628Q9UI54 55 aa4.57□□□□□ -1.68
CLIP2-206ENST00000487091 LCE1CQ5T751 118 aa4.55□□□□□ -1.68
CLIP2-206ENST00000487091 LCE3DQ9BYE3 92 aa4.31□□□□□ -1.72
CLIP2-206ENST00000487091 KTN1-AS1Q86SY8 53 aa4.24□□□□□ -1.73
CLIP2-206ENST00000487091 KRTAP4-12Q9BQ66 201 aa4.18□□□□□ -1.74
CLIP2-206ENST00000487091 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.14□□□□□ -1.75
CLIP2-206ENST00000487091 KRTAP5-11Q6L8G4 156 aa4.12□□□□□ -1.75
CLIP2-206ENST00000487091 LCE3EQ5T5B0 92 aa4.05□□□□□ -1.76
CLIP2-206ENST00000487091 LCE1FQ5T754 118 aa4.05□□□□□ -1.76
CLIP2-206ENST00000487091 LUZP6Q538Z0 58 aa3.9□□□□□ -1.79
CLIP2-206ENST00000487091 KRTAP21-2Q3LI59 83 aa3.79□□□□□ -1.8
CLIP2-206ENST00000487091 PHGR1C9JFL3 82 aa3.63□□□□□ -1.83
CLIP2-206ENST00000487091 H3BS24 57 aa3.56□□□□□ -1.84
CLIP2-206ENST00000487091 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
CLIP2-206ENST00000487091 A0A0A0MQY5 61 aa3.32□□□□□ -1.88
CLIP2-206ENST00000487091 MUC19Q7Z5P9 8384 aa3.29□□□□□ -1.88
CLIP2-206ENST00000487091 NDUFAF8A1L188 74 aa3.25□□□□□ -1.89
CLIP2-206ENST00000487091 PRM1P04553 51 aa2.98□□□□□ -1.93
CLIP2-206ENST00000487091 KRTAP21-1Q3LI58 79 aa2.77□□□□□ -1.97
CLIP2-206ENST00000487091 INE1O15225 51 aa2.73□□□□□ -1.97
CLIP2-206ENST00000487091 MUC16Q8WXI7 14507 aa2.34□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 195.6 ms