RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 TMEM258P61165 79 aa5.39□□□□□ -1.55
CLDN11-207ENST00000486975 MT1EP04732 61 aa5.38□□□□□ -1.55
CLDN11-207ENST00000486975 KRTAP12-1P59990 96 aa5.37□□□□□ -1.55
CLDN11-207ENST00000486975 SPINT4Q6UDR6 99 aa5.36□□□□□ -1.55
CLDN11-207ENST00000486975 KRTAP19-3Q7Z4W3 81 aa5.35□□□□□ -1.55
CLDN11-207ENST00000486975 PRR15LQ9BU68 103 aa5.32□□□□□ -1.56
CLDN11-207ENST00000486975 SMIM26A0A096LP01 95 aa5.3□□□□□ -1.56
CLDN11-207ENST00000486975 LINC01558Q9Y6Z2 57 aa5.28□□□□□ -1.56
CLDN11-207ENST00000486975 DSTQ03001 7570 aaKnown RBP5.27□□□□□ -1.57
CLDN11-207ENST00000486975 KRTAP9-6A8MVA2 160 aa5.25□□□□□ -1.57
CLDN11-207ENST00000486975 KRTAP19-5Q3LI72 72 aa5.25□□□□□ -1.57
CLDN11-207ENST00000486975 GPR98Q8WXG9 6306 aa5.24□□□□□ -1.57
CLDN11-207ENST00000486975 A8MU10 97 aa5.24□□□□□ -1.57
CLDN11-207ENST00000486975 MT1GP13640 62 aa5.22□□□□□ -1.57
CLDN11-207ENST00000486975 LCE1FQ5T754 118 aa5.2□□□□□ -1.58
CLDN11-207ENST00000486975 KRTAP5-4Q6L8H1 288 aa5.19□□□□□ -1.58
CLDN11-207ENST00000486975 KRTAP4-4Q9BYR3 166 aa5.19□□□□□ -1.58
CLDN11-207ENST00000486975 PP632Q6XCG6 107 aa5.18□□□□□ -1.58
CLDN11-207ENST00000486975 UQCR11O14957 56 aa5.14□□□□□ -1.59
CLDN11-207ENST00000486975 TNP1P09430 55 aa5.13□□□□□ -1.59
CLDN11-207ENST00000486975 MT1LQ93083 61 aa5.13□□□□□ -1.59
CLDN11-207ENST00000486975 C10orf95Q9H7T3 257 aa5.13□□□□□ -1.59
CLDN11-207ENST00000486975 MT1MQ8N339 61 aa5.12□□□□□ -1.59
CLDN11-207ENST00000486975 LCE3AQ5TA76 89 aa5.11□□□□□ -1.59
CLDN11-207ENST00000486975 V9GYY9 64 aa5.09□□□□□ -1.59
CLDN11-207ENST00000486975 Q1T7F1 81 aa5.05□□□□□ -1.6
CLDN11-207ENST00000486975 A0A0A0MQY5 61 aa5.03□□□□□ -1.6
CLDN11-207ENST00000486975 MIR22HGQ0VDD5 57 aa5.03□□□□□ -1.6
CLDN11-207ENST00000486975 PSPHP1O15172 72 aa5.02□□□□□ -1.61
CLDN11-207ENST00000486975 PCP4P48539 62 aa5□□□□□ -1.61
CLDN11-207ENST00000486975 KRTAP4-3Q9BYR4 195 aa4.96□□□□□ -1.62
CLDN11-207ENST00000486975 K7ERS5 55 aa4.93□□□□□ -1.62
CLDN11-207ENST00000486975 KRTAP12-3P60328 96 aa4.93□□□□□ -1.62
CLDN11-207ENST00000486975 RPS28P62857 69 aaKnown RBP4.93□□□□□ -1.62
CLDN11-207ENST00000486975 HMCN1Q96RW7 5635 aa4.92□□□□□ -1.62
CLDN11-207ENST00000486975 MT4P47944 62 aa4.92□□□□□ -1.62
CLDN11-207ENST00000486975 LCE3CQ5T5A8 94 aa4.92□□□□□ -1.62
CLDN11-207ENST00000486975 A6NED7 52 aa4.87□□□□□ -1.63
CLDN11-207ENST00000486975 KRTAP25-1Q3LHN0 102 aa4.85□□□□□ -1.63
CLDN11-207ENST00000486975 AHNAK2Q8IVF2 5795 aa4.75□□□□□ -1.65
CLDN11-207ENST00000486975 OBSCNQ5VST9 7968 aa4.73□□□□□ -1.65
CLDN11-207ENST00000486975 KRTAP5-5Q701N2 237 aaPredicted RBP4.73□□□□□ -1.65
CLDN11-207ENST00000486975 KRTAP5-10Q6L8G5 202 aa4.7□□□□□ -1.66
CLDN11-207ENST00000486975 CDC42SE1Q9NRR8 79 aa4.67□□□□□ -1.66
CLDN11-207ENST00000486975 SPRR5A0A1B0GTR4 108 aa4.65□□□□□ -1.67
CLDN11-207ENST00000486975 KRTAP20-2Q3LI61 65 aa4.64□□□□□ -1.67
CLDN11-207ENST00000486975 ROMO1P60602 79 aa4.61□□□□□ -1.67
CLDN11-207ENST00000486975 KRTAP12-4P60329 112 aa4.6□□□□□ -1.67
CLDN11-207ENST00000486975 KRTAP5-7Q6L8G8 165 aa4.54□□□□□ -1.68
CLDN11-207ENST00000486975 SYNE1Q8NF91 8797 aaKnown RBP4.5□□□□□ -1.69
CLDN11-207ENST00000486975 LCE3EQ5T5B0 92 aa4.49□□□□□ -1.69
CLDN11-207ENST00000486975 SVIPQ8NHG7 77 aa4.46□□□□□ -1.7
CLDN11-207ENST00000486975 NDUFAF8A1L188 74 aa4.39□□□□□ -1.71
CLDN11-207ENST00000486975 MT1AP04731 61 aa4.38□□□□□ -1.71
CLDN11-207ENST00000486975 BRK1Q8WUW1 75 aa4.35□□□□□ -1.71
CLDN11-207ENST00000486975 KRTAP6-1Q3LI64 71 aa4.32□□□□□ -1.72
CLDN11-207ENST00000486975 KRTAP5-2Q701N4 177 aa4.32□□□□□ -1.72
CLDN11-207ENST00000486975 KRTAP6-2Q3LI66 62 aa4.14□□□□□ -1.75
CLDN11-207ENST00000486975 PRAC1Q96KF2 57 aa4.14□□□□□ -1.75
CLDN11-207ENST00000486975 KRTAP5-8O75690 187 aa4.12□□□□□ -1.75
CLDN11-207ENST00000486975 PMAIP1Q13794 54 aa4.11□□□□□ -1.75
CLDN11-207ENST00000486975 AHNAKQ09666 5890 aaKnown RBP4.01□□□□□ -1.77
CLDN11-207ENST00000486975 MUC5ACP98088 5654 aa3.96□□□□□ -1.78
CLDN11-207ENST00000486975 MUC5BQ9HC84 5762 aaPredicted RBP3.93□□□□□ -1.78
CLDN11-207ENST00000486975 LCE1CQ5T751 118 aa3.9□□□□□ -1.79
CLDN11-207ENST00000486975 LCE1BQ5T7P3 118 aa3.9□□□□□ -1.79
CLDN11-207ENST00000486975 PRO0628Q9UI54 55 aa3.9□□□□□ -1.79
CLDN11-207ENST00000486975 KTN1-AS1Q86SY8 53 aa3.71□□□□□ -1.82
CLDN11-207ENST00000486975 LCE3DQ9BYE3 92 aa3.51□□□□□ -1.85
CLDN11-207ENST00000486975 LUZP6Q538Z0 58 aa3.3□□□□□ -1.88
CLDN11-207ENST00000486975 MUC19Q7Z5P9 8384 aa3.25□□□□□ -1.89
CLDN11-207ENST00000486975 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
CLDN11-207ENST00000486975 PHGR1C9JFL3 82 aa2.72□□□□□ -1.97
CLDN11-207ENST00000486975 PRM1P04553 51 aa2.35□□□□□ -2.03
CLDN11-207ENST00000486975 INE1O15225 51 aa2.3□□□□□ -2.04
CLDN11-207ENST00000486975 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.07
CLDN11-207ENST00000486975 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 13.3 ms