RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 TFF3Q07654 80 aa-1.08□□□□□ -2.58
SCAF11-207ENST00000484275 TMEM167BQ9NRX6 74 aa-1.08□□□□□ -2.58
SCAF11-207ENST00000484275 MROH2AA6NES4 1674 aa-1.09□□□□□ -2.58
SCAF11-207ENST00000484275 LINC01549A6NIU2 74 aa-1.09□□□□□ -2.58
SCAF11-207ENST00000484275 SPART-AS1P0CW21 52 aa-1.09□□□□□ -2.58
SCAF11-207ENST00000484275 KAAG1Q9UBP8 84 aa-1.09□□□□□ -2.58
SCAF11-207ENST00000484275 SERF2P84101 59 aa-1.1□□□□□ -2.59
SCAF11-207ENST00000484275 EFCAB5A4FU69 1503 aa-1.1□□□□□ -2.59
SCAF11-207ENST00000484275 M0R1W7 72 aa-1.11□□□□□ -2.59
SCAF11-207ENST00000484275 EFCAB6Q5THR3 1501 aa-1.11□□□□□ -2.59
SCAF11-207ENST00000484275 A0A096LNI7 61 aa-1.12□□□□□ -2.59
SCAF11-207ENST00000484275 PDCD5O14737 125 aa-1.12□□□□□ -2.59
SCAF11-207ENST00000484275 SMCO4Q9NRQ5 59 aa-1.12□□□□□ -2.59
SCAF11-207ENST00000484275 UGGT1Q9NYU2 1555 aa-1.13□□□□□ -2.59
SCAF11-207ENST00000484275 ABCA10Q8WWZ4 1543 aa-1.13□□□□□ -2.59
SCAF11-207ENST00000484275 SMIM27A0A1W2PRY6 76 aa-1.13□□□□□ -2.59
SCAF11-207ENST00000484275 DEFB133Q30KQ1 61 aa-1.13□□□□□ -2.59
SCAF11-207ENST00000484275 DEFB124Q8NES8 71 aa-1.13□□□□□ -2.59
SCAF11-207ENST00000484275 LINC00308Q8TCZ7 52 aa-1.13□□□□□ -2.59
SCAF11-207ENST00000484275 NMES1Q9C002 83 aa-1.13□□□□□ -2.59
SCAF11-207ENST00000484275 DDX60Q8IY21 1712 aaKnown RBP-1.13□□□□□ -2.59
SCAF11-207ENST00000484275 LINC01556Q5JQF7 62 aa-1.14□□□□□ -2.59
SCAF11-207ENST00000484275 ERICH3Q5RHP9 1530 aa-1.15□□□□□ -2.59
SCAF11-207ENST00000484275 IGIPA6NJ69 53 aa-1.16□□□□□ -2.6
SCAF11-207ENST00000484275 WFDC10BQ8IUB3 73 aa-1.16□□□□□ -2.6
SCAF11-207ENST00000484275 DUOX1Q9NRD9 1551 aa-1.17□□□□□ -2.6
SCAF11-207ENST00000484275 ABCA5Q8WWZ7 1642 aa-1.17□□□□□ -2.6
SCAF11-207ENST00000484275 CD52P31358 61 aa-1.17□□□□□ -2.6
SCAF11-207ENST00000484275 SYCP2Q9BX26 1530 aa-1.18□□□□□ -2.6
SCAF11-207ENST00000484275 A0A096LPF7 62 aa-1.18□□□□□ -2.6
SCAF11-207ENST00000484275 POLR2KP53803 58 aaKnown RBP-1.18□□□□□ -2.6
SCAF11-207ENST00000484275 ABCC8Q09428 1581 aa-1.19□□□□□ -2.6
SCAF11-207ENST00000484275 AGLP35573 1532 aa-1.2□□□□□ -2.6
SCAF11-207ENST00000484275 S100ZQ8WXG8 99 aa-1.2□□□□□ -2.6
SCAF11-207ENST00000484275 DEFB108AA8MXU0 73 aa-1.21□□□□□ -2.6
SCAF11-207ENST00000484275 H0YGX0 51 aa-1.21□□□□□ -2.6
SCAF11-207ENST00000484275 HTN1P15515 57 aa-1.21□□□□□ -2.6
SCAF11-207ENST00000484275 DEFB131AP59861 70 aa-1.21□□□□□ -2.6
SCAF11-207ENST00000484275 IQGAP1P46940 1657 aa-1.21□□□□□ -2.6
SCAF11-207ENST00000484275 ADCY10Q96PN6 1610 aa-1.22□□□□□ -2.6
SCAF11-207ENST00000484275 STATHP02808 62 aa-1.22□□□□□ -2.6
SCAF11-207ENST00000484275 DEFB108BQ8NET1 73 aa-1.22□□□□□ -2.6
SCAF11-207ENST00000484275 TOP2AP11388 1531 aaKnown RBP-1.23□□□□□ -2.61
SCAF11-207ENST00000484275 ATP7AQ04656 1500 aa-1.23□□□□□ -2.61
SCAF11-207ENST00000484275 RHPN1-AS1Q9BWJ2 59 aa-1.23□□□□□ -2.61
SCAF11-207ENST00000484275 CLTCL1P53675 1640 aa-1.23□□□□□ -2.61
SCAF11-207ENST00000484275 CPS1P31327 1500 aa-1.24□□□□□ -2.61
SCAF11-207ENST00000484275 A0A087WWC5 75 aa-1.24□□□□□ -2.61
SCAF11-207ENST00000484275 H3BSH0 61 aa-1.24□□□□□ -2.61
SCAF11-207ENST00000484275 APELAP0DMC3 54 aa-1.25□□□□□ -2.61
SCAF11-207ENST00000484275 HTN3P15516 51 aa-1.27□□□□□ -2.61
SCAF11-207ENST00000484275 PRXQ9BXM0 1461 aa-1.28□□□□□ -2.61
SCAF11-207ENST00000484275 LINC01590Q5TEZ4 76 aa-1.28□□□□□ -2.61
SCAF11-207ENST00000484275 PLNP26678 52 aa-1.3□□□□□ -2.62
SCAF11-207ENST00000484275 H3BUX3 64 aa-1.31□□□□□ -2.62
SCAF11-207ENST00000484275 IQGAP2Q13576 1575 aa-1.32□□□□□ -2.62
SCAF11-207ENST00000484275 SMIM5Q71RC9 77 aa-1.32□□□□□ -2.62
SCAF11-207ENST00000484275 COX14Q96I36 57 aa-1.34□□□□□ -2.62
SCAF11-207ENST00000484275 MROH2BQ7Z745 1585 aa-1.34□□□□□ -2.62
SCAF11-207ENST00000484275 FANCD2Q9BXW9 1451 aa-1.35□□□□□ -2.63
SCAF11-207ENST00000484275 NDUFA1O15239 70 aa-1.35□□□□□ -2.63
SCAF11-207ENST00000484275 SMIM2Q9BVW6 85 aa-1.36□□□□□ -2.63
SCAF11-207ENST00000484275 SAMD9LQ8IVG5 1584 aa-1.37□□□□□ -2.63
SCAF11-207ENST00000484275 TOMM7Q9P0U1 55 aa-1.37□□□□□ -2.63
SCAF11-207ENST00000484275 K7EIM0 57 aa-1.39□□□□□ -2.63
SCAF11-207ENST00000484275 RPL39P62891 51 aaKnown RBP-1.4□□□□□ -2.63
SCAF11-207ENST00000484275 Q9Y3F1 56 aa-1.4□□□□□ -2.63
SCAF11-207ENST00000484275 PRCDQ00LT1 54 aa-1.41□□□□□ -2.64
SCAF11-207ENST00000484275 TMEM167AQ8TBQ9 72 aa-1.41□□□□□ -2.64
SCAF11-207ENST00000484275 RPL39LQ96EH5 51 aaKnown RBP-1.41□□□□□ -2.64
SCAF11-207ENST00000484275 CMC2Q9NRP2 79 aa-1.43□□□□□ -2.64
SCAF11-207ENST00000484275 GCC2Q8IWJ2 1684 aa-1.47□□□□□ -2.64
SCAF11-207ENST00000484275 RPL39P5Q59GN2 51 aa-1.47□□□□□ -2.64
SCAF11-207ENST00000484275 ARHGAP5-AS1Q96IT6 56 aa-1.49□□□□□ -2.65
SCAF11-207ENST00000484275 SMIM31A0A1B0GVY4 71 aa-1.5□□□□□ -2.65
SCAF11-207ENST00000484275 SNRPGP15A8MWD9 76 aa-1.54□□□□□ -2.66
SCAF11-207ENST00000484275 SNRPGP62308 76 aaKnown RBP-1.59□□□□□ -2.66
SCAF11-207ENST00000484275 TOMM5Q8N4H5 51 aa-1.84□□□□□ -2.7
Retrieved 78 of 20,778 RNA–protein pairs in 94.4 ms