RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 MT1MQ8N339 61 aa6.63□□□□□ -1.35
HSPG2-210ENST00000481644 PSPHP1O15172 72 aa6.62□□□□□ -1.35
HSPG2-210ENST00000481644 Q1T7F1 81 aa6.6□□□□□ -1.35
HSPG2-210ENST00000481644 K7ERS5 55 aa6.58□□□□□ -1.36
HSPG2-210ENST00000481644 KRTAP12-3P60328 96 aa6.52□□□□□ -1.37
HSPG2-210ENST00000481644 KRTAP25-1Q3LHN0 102 aa6.5□□□□□ -1.37
HSPG2-210ENST00000481644 KRTAP4-9Q9BYQ8 210 aa6.48□□□□□ -1.37
HSPG2-210ENST00000481644 KRTAP4-3Q9BYR4 195 aa6.47□□□□□ -1.37
HSPG2-210ENST00000481644 A6NED7 52 aa6.41□□□□□ -1.38
HSPG2-210ENST00000481644 LCE4AQ5TA78 99 aa6.36□□□□□ -1.39
HSPG2-210ENST00000481644 KRTAP4-7Q9BYR0 210 aa6.35□□□□□ -1.39
HSPG2-210ENST00000481644 LCE1DQ5T752 114 aa6.34□□□□□ -1.39
HSPG2-210ENST00000481644 MT4P47944 62 aa6.3□□□□□ -1.4
HSPG2-210ENST00000481644 RPS28P62857 69 aaKnown RBP6.3□□□□□ -1.4
HSPG2-210ENST00000481644 PCP4P48539 62 aa6.29□□□□□ -1.4
HSPG2-210ENST00000481644 KRTAP23-1A1A580 65 aa6.25□□□□□ -1.41
HSPG2-210ENST00000481644 KRTAP5-4Q6L8H1 288 aa6.25□□□□□ -1.41
HSPG2-210ENST00000481644 CDC42SE1Q9NRR8 79 aa6.23□□□□□ -1.41
HSPG2-210ENST00000481644 GPR98Q8WXG9 6306 aa6.18□□□□□ -1.42
HSPG2-210ENST00000481644 HMCN1Q96RW7 5635 aa6.15□□□□□ -1.42
HSPG2-210ENST00000481644 KRTAP19-4Q3LI73 84 aa6.14□□□□□ -1.43
HSPG2-210ENST00000481644 ROMO1P60602 79 aa6.12□□□□□ -1.43
HSPG2-210ENST00000481644 KRTAP15-1Q3LI76 137 aa6.12□□□□□ -1.43
HSPG2-210ENST00000481644 KRTAP4-6Q9BYQ5 205 aa6.11□□□□□ -1.43
HSPG2-210ENST00000481644 KRTAP5-5Q701N2 237 aaPredicted RBP6.05□□□□□ -1.44
HSPG2-210ENST00000481644 LOC100996750A0A140TA64 210 aa6.01□□□□□ -1.45
HSPG2-210ENST00000481644 LCE3CQ5T5A8 94 aa6.01□□□□□ -1.45
HSPG2-210ENST00000481644 KRTAP20-2Q3LI61 65 aa5.91□□□□□ -1.46
HSPG2-210ENST00000481644 AHNAK2Q8IVF2 5795 aa5.91□□□□□ -1.46
HSPG2-210ENST00000481644 KRTAP12-4P60329 112 aa5.9□□□□□ -1.46
HSPG2-210ENST00000481644 SPRR5A0A1B0GTR4 108 aa5.89□□□□□ -1.47
HSPG2-210ENST00000481644 KRTAP5-10Q6L8G5 202 aa5.83□□□□□ -1.48
HSPG2-210ENST00000481644 SYNE1Q8NF91 8797 aaKnown RBP5.78□□□□□ -1.48
HSPG2-210ENST00000481644 KRTAP5-3Q6L8H2 238 aa5.73□□□□□ -1.49
HSPG2-210ENST00000481644 MT1AP04731 61 aa5.68□□□□□ -1.5
HSPG2-210ENST00000481644 KRTAP9-6A8MVA2 160 aa5.66□□□□□ -1.5
HSPG2-210ENST00000481644 KRTAP6-1Q3LI64 71 aa5.64□□□□□ -1.51
HSPG2-210ENST00000481644 KRTAP5-7Q6L8G8 165 aa5.6□□□□□ -1.51
HSPG2-210ENST00000481644 BRK1Q8WUW1 75 aa5.58□□□□□ -1.52
HSPG2-210ENST00000481644 KRTAP5-2Q701N4 177 aa5.49□□□□□ -1.53
HSPG2-210ENST00000481644 KRTAP9-4Q9BYQ2 154 aa5.48□□□□□ -1.53
HSPG2-210ENST00000481644 KRTAP6-2Q3LI66 62 aa5.38□□□□□ -1.55
HSPG2-210ENST00000481644 KRTAP4-11Q9BYQ6 195 aa5.37□□□□□ -1.55
HSPG2-210ENST00000481644 PMAIP1Q13794 54 aa5.23□□□□□ -1.57
HSPG2-210ENST00000481644 MT3P25713 68 aa5.2□□□□□ -1.58
HSPG2-210ENST00000481644 KRTAP5-8O75690 187 aa5.18□□□□□ -1.58
HSPG2-210ENST00000481644 OBSCNQ5VST9 7968 aa5.15□□□□□ -1.59
HSPG2-210ENST00000481644 PRAC1Q96KF2 57 aa5.04□□□□□ -1.6
HSPG2-210ENST00000481644 KRTAP5-1Q6L8H4 278 aa4.91□□□□□ -1.62
HSPG2-210ENST00000481644 KRTAP9-9Q9BYP9 154 aa4.91□□□□□ -1.62
HSPG2-210ENST00000481644 PRO0628Q9UI54 55 aa4.87□□□□□ -1.63
HSPG2-210ENST00000481644 MUC5ACP98088 5654 aa4.83□□□□□ -1.64
HSPG2-210ENST00000481644 MUC5BQ9HC84 5762 aaPredicted RBP4.81□□□□□ -1.64
HSPG2-210ENST00000481644 AHNAKQ09666 5890 aaKnown RBP4.78□□□□□ -1.64
HSPG2-210ENST00000481644 LCE1EQ5T753 118 aa4.74□□□□□ -1.65
HSPG2-210ENST00000481644 KTN1-AS1Q86SY8 53 aa4.66□□□□□ -1.66
HSPG2-210ENST00000481644 SVIPQ8NHG7 77 aa4.5□□□□□ -1.69
HSPG2-210ENST00000481644 LCE1BQ5T7P3 118 aa4.48□□□□□ -1.69
HSPG2-210ENST00000481644 KRTAP4-2Q9BYR5 136 aa4.47□□□□□ -1.69
HSPG2-210ENST00000481644 LCE1CQ5T751 118 aa4.4□□□□□ -1.71
HSPG2-210ENST00000481644 LCE3DQ9BYE3 92 aa4.35□□□□□ -1.71
HSPG2-210ENST00000481644 LUZP6Q538Z0 58 aa4.26□□□□□ -1.73
HSPG2-210ENST00000481644 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
HSPG2-210ENST00000481644 KRTAP4-12Q9BQ66 201 aa4.03□□□□□ -1.76
HSPG2-210ENST00000481644 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.01□□□□□ -1.77
HSPG2-210ENST00000481644 KRTAP5-11Q6L8G4 156 aa3.98□□□□□ -1.77
HSPG2-210ENST00000481644 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
HSPG2-210ENST00000481644 KRTAP21-2Q3LI59 83 aa3.71□□□□□ -1.82
HSPG2-210ENST00000481644 NDUFAF8A1L188 74 aa3.43□□□□□ -1.86
HSPG2-210ENST00000481644 PHGR1C9JFL3 82 aa3.43□□□□□ -1.86
HSPG2-210ENST00000481644 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.87
HSPG2-210ENST00000481644 MUC19Q7Z5P9 8384 aa3.16□□□□□ -1.9
HSPG2-210ENST00000481644 PRM1P04553 51 aa3.14□□□□□ -1.91
HSPG2-210ENST00000481644 INE1O15225 51 aa2.75□□□□□ -1.97
HSPG2-210ENST00000481644 A0A0A0MQY5 61 aa2.71□□□□□ -1.98
HSPG2-210ENST00000481644 KRTAP21-1Q3LI58 79 aa2.58□□□□□ -2
HSPG2-210ENST00000481644 H3BS24 57 aa2.54□□□□□ -2
HSPG2-210ENST00000481644 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 12.1 ms