RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 TMEM258P61165 79 aa5.27□□□□□ -1.57
PRKN-207ENST00000479615 LCE1DQ5T752 114 aa5.23□□□□□ -1.57
PRKN-207ENST00000479615 GPR98Q8WXG9 6306 aa5.21□□□□□ -1.57
PRKN-207ENST00000479615 KRTAP12-3P60328 96 aa5.18□□□□□ -1.58
PRKN-207ENST00000479615 MT4P47944 62 aa5.15□□□□□ -1.59
PRKN-207ENST00000479615 KRTAP5-4Q6L8H1 288 aa5.15□□□□□ -1.59
PRKN-207ENST00000479615 K7ERS5 55 aa5.13□□□□□ -1.59
PRKN-207ENST00000479615 KRTAP4-3Q9BYR4 195 aa5.13□□□□□ -1.59
PRKN-207ENST00000479615 MIR22HGQ0VDD5 57 aa5.12□□□□□ -1.59
PRKN-207ENST00000479615 KRTAP25-1Q3LHN0 102 aa5.12□□□□□ -1.59
PRKN-207ENST00000479615 HMCN1Q96RW7 5635 aa5.1□□□□□ -1.59
PRKN-207ENST00000479615 V9GYY9 64 aa5.08□□□□□ -1.6
PRKN-207ENST00000479615 KRTAP19-4Q3LI73 84 aa5.05□□□□□ -1.6
PRKN-207ENST00000479615 KRTAP4-7Q9BYR0 210 aa5□□□□□ -1.61
PRKN-207ENST00000479615 KRTAP4-6Q9BYQ5 205 aa4.99□□□□□ -1.61
PRKN-207ENST00000479615 KRTAP23-1A1A580 65 aa4.98□□□□□ -1.61
PRKN-207ENST00000479615 Q1T7F1 81 aa4.97□□□□□ -1.61
PRKN-207ENST00000479615 PSPHP1O15172 72 aa4.93□□□□□ -1.62
PRKN-207ENST00000479615 KRTAP5-5Q701N2 237 aaPredicted RBP4.9□□□□□ -1.63
PRKN-207ENST00000479615 KRTAP5-10Q6L8G5 202 aa4.89□□□□□ -1.63
PRKN-207ENST00000479615 SPRR5A0A1B0GTR4 108 aa4.88□□□□□ -1.63
PRKN-207ENST00000479615 AHNAK2Q8IVF2 5795 aa4.87□□□□□ -1.63
PRKN-207ENST00000479615 KRTAP12-4P60329 112 aa4.87□□□□□ -1.63
PRKN-207ENST00000479615 KRTAP20-2Q3LI61 65 aa4.84□□□□□ -1.63
PRKN-207ENST00000479615 KRTAP15-1Q3LI76 137 aa4.83□□□□□ -1.64
PRKN-207ENST00000479615 A6NED7 52 aa4.81□□□□□ -1.64
PRKN-207ENST00000479615 CDC42SE1Q9NRR8 79 aa4.79□□□□□ -1.64
PRKN-207ENST00000479615 KRTAP5-3Q6L8H2 238 aa4.78□□□□□ -1.64
PRKN-207ENST00000479615 LCE3CQ5T5A8 94 aa4.76□□□□□ -1.65
PRKN-207ENST00000479615 LOC100996750A0A140TA64 210 aa4.75□□□□□ -1.65
PRKN-207ENST00000479615 KRTAP5-7Q6L8G8 165 aa4.74□□□□□ -1.65
PRKN-207ENST00000479615 ROMO1P60602 79 aa4.69□□□□□ -1.66
PRKN-207ENST00000479615 RPS28P62857 69 aaKnown RBP4.68□□□□□ -1.66
PRKN-207ENST00000479615 SYNE1Q8NF91 8797 aaKnown RBP4.63□□□□□ -1.67
PRKN-207ENST00000479615 MT1AP04731 61 aa4.57□□□□□ -1.68
PRKN-207ENST00000479615 KRTAP6-1Q3LI64 71 aa4.49□□□□□ -1.69
PRKN-207ENST00000479615 KRTAP5-2Q701N4 177 aa4.49□□□□□ -1.69
PRKN-207ENST00000479615 KRTAP4-11Q9BYQ6 195 aa4.45□□□□□ -1.7
PRKN-207ENST00000479615 PCP4P48539 62 aa4.43□□□□□ -1.7
PRKN-207ENST00000479615 KRTAP9-4Q9BYQ2 154 aa4.43□□□□□ -1.7
PRKN-207ENST00000479615 KRTAP9-6A8MVA2 160 aa4.4□□□□□ -1.71
PRKN-207ENST00000479615 KRTAP6-2Q3LI66 62 aa4.32□□□□□ -1.72
PRKN-207ENST00000479615 SVIPQ8NHG7 77 aa4.32□□□□□ -1.72
PRKN-207ENST00000479615 KRTAP5-8O75690 187 aa4.28□□□□□ -1.72
PRKN-207ENST00000479615 MT3P25713 68 aa4.23□□□□□ -1.73
PRKN-207ENST00000479615 OBSCNQ5VST9 7968 aa4.16□□□□□ -1.74
PRKN-207ENST00000479615 KRTAP9-9Q9BYP9 154 aa4.12□□□□□ -1.75
PRKN-207ENST00000479615 MUC5BQ9HC84 5762 aaPredicted RBP4.07□□□□□ -1.76
PRKN-207ENST00000479615 MUC5ACP98088 5654 aa4.06□□□□□ -1.76
PRKN-207ENST00000479615 AHNAKQ09666 5890 aaKnown RBP4.03□□□□□ -1.76
PRKN-207ENST00000479615 KRTAP5-1Q6L8H4 278 aa4.02□□□□□ -1.77
PRKN-207ENST00000479615 BRK1Q8WUW1 75 aa4.02□□□□□ -1.77
PRKN-207ENST00000479615 H3BS24 57 aa3.92□□□□□ -1.78
PRKN-207ENST00000479615 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
PRKN-207ENST00000479615 PMAIP1Q13794 54 aa3.81□□□□□ -1.8
PRKN-207ENST00000479615 KRTAP4-12Q9BQ66 201 aa3.77□□□□□ -1.81
PRKN-207ENST00000479615 LCE1CQ5T751 118 aa3.62□□□□□ -1.83
PRKN-207ENST00000479615 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
PRKN-207ENST00000479615 KRTAP4-2Q9BYR5 136 aa3.62□□□□□ -1.83
PRKN-207ENST00000479615 PRAC1Q96KF2 57 aa3.58□□□□□ -1.84
PRKN-207ENST00000479615 LCE3DQ9BYE3 92 aa3.44□□□□□ -1.86
PRKN-207ENST00000479615 PRO0628Q9UI54 55 aa3.43□□□□□ -1.86
PRKN-207ENST00000479615 KTN1-AS1Q86SY8 53 aa3.31□□□□□ -1.88
PRKN-207ENST00000479615 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.29□□□□□ -1.88
PRKN-207ENST00000479615 KRTAP5-11Q6L8G4 156 aa3.26□□□□□ -1.89
PRKN-207ENST00000479615 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
PRKN-207ENST00000479615 LCE3EQ5T5B0 92 aa3.23□□□□□ -1.89
PRKN-207ENST00000479615 LUZP6Q538Z0 58 aa3.21□□□□□ -1.9
PRKN-207ENST00000479615 A0A0A0MQY5 61 aa3□□□□□ -1.93
PRKN-207ENST00000479615 KRTAP21-2Q3LI59 83 aa2.97□□□□□ -1.93
PRKN-207ENST00000479615 PHGR1C9JFL3 82 aa2.85□□□□□ -1.95
PRKN-207ENST00000479615 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
PRKN-207ENST00000479615 MUC19Q7Z5P9 8384 aa2.54□□□□□ -2
PRKN-207ENST00000479615 NDUFAF8A1L188 74 aa2.35□□□□□ -2.03
PRKN-207ENST00000479615 PRM1P04553 51 aa2.34□□□□□ -2.03
PRKN-207ENST00000479615 KRTAP21-1Q3LI58 79 aa2.22□□□□□ -2.05
PRKN-207ENST00000479615 INE1O15225 51 aa1.96□□□□□ -2.1
PRKN-207ENST00000479615 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 118.2 ms