RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 SPRR2FQ96RM1 72 aa0.41□□□□□ -2.34
SRRM1-211ENST00000478890 KMT2AQ03164 3969 aa0.41□□□□□ -2.34
SRRM1-211ENST00000478890 DNAH17Q9UFH2 4485 aa0.4□□□□□ -2.34
SRRM1-211ENST00000478890 DNAH2Q9P225 4427 aa0.4□□□□□ -2.34
SRRM1-211ENST00000478890 VPS13BQ7Z7G8 4022 aa0.4□□□□□ -2.35
SRRM1-211ENST00000478890 STARD9Q9P2P6 4700 aa0.4□□□□□ -2.35
SRRM1-211ENST00000478890 LRP1BQ9NZR2 4599 aa0.4□□□□□ -2.35
SRRM1-211ENST00000478890 HSPG2P98160 4391 aa0.4□□□□□ -2.35
SRRM1-211ENST00000478890 KIAA1109Q2LD37 5005 aa0.4□□□□□ -2.35
SRRM1-211ENST00000478890 AHNAKQ09666 5890 aaKnown RBP0.4□□□□□ -2.35
SRRM1-211ENST00000478890 APOBP04114 4563 aaKnown RBP0.4□□□□□ -2.35
SRRM1-211ENST00000478890 FAT2Q9NYQ8 4349 aa0.39□□□□□ -2.35
SRRM1-211ENST00000478890 FAT3Q8TDW7 4589 aa0.39□□□□□ -2.35
SRRM1-211ENST00000478890 SPRR2EP22531 72 aa0.39□□□□□ -2.35
SRRM1-211ENST00000478890 SPRR2BP35325 72 aa0.39□□□□□ -2.35
SRRM1-211ENST00000478890 SPRR2AP35326 72 aa0.39□□□□□ -2.35
SRRM1-211ENST00000478890 FRAS1Q86XX4 4008 aa0.39□□□□□ -2.35
SRRM1-211ENST00000478890 LRP1Q07954 4544 aaKnown RBP0.39□□□□□ -2.35
SRRM1-211ENST00000478890 PLECQ15149 4684 aaKnown RBP0.38□□□□□ -2.35
SRRM1-211ENST00000478890 RYR3Q15413 4870 aa0.38□□□□□ -2.35
SRRM1-211ENST00000478890 PKHD1L1Q86WI1 4243 aa0.38□□□□□ -2.35
SRRM1-211ENST00000478890 DYNC1H1Q14204 4646 aaKnown RBP0.38□□□□□ -2.35
SRRM1-211ENST00000478890 SPRR2DP22532 72 aa0.38□□□□□ -2.35
SRRM1-211ENST00000478890 FAT1Q14517 4588 aa0.37□□□□□ -2.35
SRRM1-211ENST00000478890 DNAH8Q96JB1 4490 aa0.37□□□□□ -2.35
SRRM1-211ENST00000478890 SACSQ9NZJ4 4579 aa0.37□□□□□ -2.35
SRRM1-211ENST00000478890 MT1GP13640 62 aa0.37□□□□□ -2.35
SRRM1-211ENST00000478890 KRTAP19-6Q3LI70 58 aa0.37□□□□□ -2.35
SRRM1-211ENST00000478890 MT1LQ93083 61 aa0.37□□□□□ -2.35
SRRM1-211ENST00000478890 DNAH5Q8TE73 4624 aa0.37□□□□□ -2.35
SRRM1-211ENST00000478890 KMT2CQ8NEZ4 4911 aaKnown RBP0.37□□□□□ -2.35
SRRM1-211ENST00000478890 LRP2P98164 4655 aa0.36□□□□□ -2.35
SRRM1-211ENST00000478890 MUC16Q8WXI7 14507 aa0.36□□□□□ -2.35
SRRM1-211ENST00000478890 MT1EP04732 61 aa0.36□□□□□ -2.35
SRRM1-211ENST00000478890 KRTAP19-3Q7Z4W3 81 aa0.36□□□□□ -2.35
SRRM1-211ENST00000478890 RYR2Q92736 4967 aa0.36□□□□□ -2.35
SRRM1-211ENST00000478890 MUC17Q685J3 4493 aa0.36□□□□□ -2.35
SRRM1-211ENST00000478890 RYR1P21817 5038 aa0.35□□□□□ -2.35
SRRM1-211ENST00000478890 SYNE2Q8WXH0 6885 aaKnown RBP0.35□□□□□ -2.35
SRRM1-211ENST00000478890 HERC1Q15751 4861 aa0.35□□□□□ -2.35
SRRM1-211ENST00000478890 FLGP20930 4061 aaPredicted RBP0.35□□□□□ -2.35
SRRM1-211ENST00000478890 MT1MQ8N339 61 aa0.35□□□□□ -2.35
SRRM1-211ENST00000478890 HERC2O95714 4834 aa0.35□□□□□ -2.35
SRRM1-211ENST00000478890 PCLOQ9Y6V0 5065 aa0.34□□□□□ -2.35
SRRM1-211ENST00000478890 LPAP08519 4548 aa0.34□□□□□ -2.35
SRRM1-211ENST00000478890 MT4P47944 62 aa0.34□□□□□ -2.36
SRRM1-211ENST00000478890 KRTAP19-7Q3SYF9 63 aa0.34□□□□□ -2.36
SRRM1-211ENST00000478890 HYDINQ4G0P3 5121 aa0.34□□□□□ -2.36
SRRM1-211ENST00000478890 ABCA13Q86UQ4 5058 aa0.34□□□□□ -2.36
SRRM1-211ENST00000478890 KRTAP20-1Q3LI63 56 aa0.33□□□□□ -2.36
SRRM1-211ENST00000478890 FSIP2Q5CZC0 6907 aa0.33□□□□□ -2.36
SRRM1-211ENST00000478890 TNXBP22105 4242 aa0.33□□□□□ -2.36
SRRM1-211ENST00000478890 BIRC6Q9NR09 4857 aa0.33□□□□□ -2.36
SRRM1-211ENST00000478890 EPPK1P58107 5090 aaKnown RBP0.32□□□□□ -2.36
SRRM1-211ENST00000478890 RNF213Q63HN8 5207 aa0.32□□□□□ -2.36
SRRM1-211ENST00000478890 KRTAP2-3P0C7H8 128 aa0.32□□□□□ -2.36
SRRM1-211ENST00000478890 KRTAP2-4Q9BYR9 128 aa0.32□□□□□ -2.36
SRRM1-211ENST00000478890 MUC2Q02817 5179 aa0.31□□□□□ -2.36
SRRM1-211ENST00000478890 MT1AP04731 61 aa0.31□□□□□ -2.36
SRRM1-211ENST00000478890 KRTAP6-1Q3LI64 71 aa0.31□□□□□ -2.36
SRRM1-211ENST00000478890 KRTAP6-2Q3LI66 62 aa0.31□□□□□ -2.36
SRRM1-211ENST00000478890 KRTAP2-1Q9BYU5 128 aa0.31□□□□□ -2.36
SRRM1-211ENST00000478890 MUC5ACP98088 5654 aa0.31□□□□□ -2.36
SRRM1-211ENST00000478890 UBR4Q5T4S7 5183 aa0.31□□□□□ -2.36
SRRM1-211ENST00000478890 DSTQ03001 7570 aaKnown RBP0.3□□□□□ -2.36
SRRM1-211ENST00000478890 MDN1Q9NU22 5596 aa0.3□□□□□ -2.36
SRRM1-211ENST00000478890 HMCN2Q8NDA2 5059 aa0.29□□□□□ -2.36
SRRM1-211ENST00000478890 FAT4Q6V0I7 4981 aa0.28□□□□□ -2.36
SRRM1-211ENST00000478890 PRM1P04553 51 aa0.28□□□□□ -2.36
SRRM1-211ENST00000478890 SSPOA2VEC9 5147 aa0.28□□□□□ -2.37
SRRM1-211ENST00000478890 NEBP20929 6669 aa0.27□□□□□ -2.37
SRRM1-211ENST00000478890 KRTAP20-2Q3LI61 65 aa0.27□□□□□ -2.37
SRRM1-211ENST00000478890 USH2AO75445 5202 aa0.27□□□□□ -2.37
SRRM1-211ENST00000478890 KMT2DO14686 5537 aa0.25□□□□□ -2.37
SRRM1-211ENST00000478890 MUC12Q9UKN1 5478 aa0.24□□□□□ -2.37
SRRM1-211ENST00000478890 KRTAP21-1Q3LI58 79 aa0.17□□□□□ -2.38
SRRM1-211ENST00000478890 PHGR1C9JFL3 82 aa0.16□□□□□ -2.38
SRRM1-211ENST00000478890 SYNE1Q8NF91 8797 aaKnown RBP0.15□□□□□ -2.39
Retrieved 78 of 20,778 RNA–protein pairs in 72.7 ms