RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 TMEM258P61165 79 aa5.36□□□□□ -1.55
PDE6D-204ENST00000477748 LINC01558Q9Y6Z2 57 aa5.34□□□□□ -1.55
PDE6D-204ENST00000477748 KRTAP19-7Q3SYF9 63 aa5.29□□□□□ -1.56
PDE6D-204ENST00000477748 MT1EP04732 61 aa5.25□□□□□ -1.57
PDE6D-204ENST00000477748 C10orf95Q9H7T3 257 aa5.21□□□□□ -1.58
PDE6D-204ENST00000477748 UQCR11O14957 56 aa5.2□□□□□ -1.58
PDE6D-204ENST00000477748 KRTAP19-3Q7Z4W3 81 aa5.2□□□□□ -1.58
PDE6D-204ENST00000477748 TNP1P09430 55 aa5.19□□□□□ -1.58
PDE6D-204ENST00000477748 KRTAP19-5Q3LI72 72 aa5.19□□□□□ -1.58
PDE6D-204ENST00000477748 KRTAP15-1Q3LI76 137 aa5.18□□□□□ -1.58
PDE6D-204ENST00000477748 LCE3AQ5TA76 89 aa5.12□□□□□ -1.59
PDE6D-204ENST00000477748 MIR22HGQ0VDD5 57 aa5.09□□□□□ -1.59
PDE6D-204ENST00000477748 MT1GP13640 62 aa5.08□□□□□ -1.6
PDE6D-204ENST00000477748 AHNAK2Q8IVF2 5795 aa5.07□□□□□ -1.6
PDE6D-204ENST00000477748 HMCN1Q96RW7 5635 aa5.07□□□□□ -1.6
PDE6D-204ENST00000477748 V9GYY9 64 aa5.07□□□□□ -1.6
PDE6D-204ENST00000477748 KRTAP5-10Q6L8G5 202 aa5.06□□□□□ -1.6
PDE6D-204ENST00000477748 PP632Q6XCG6 107 aa5.05□□□□□ -1.6
PDE6D-204ENST00000477748 PSPHP1O15172 72 aa5.04□□□□□ -1.6
PDE6D-204ENST00000477748 MT1LQ93083 61 aa5.03□□□□□ -1.6
PDE6D-204ENST00000477748 Q1T7F1 81 aa5.02□□□□□ -1.61
PDE6D-204ENST00000477748 K7ERS5 55 aa5□□□□□ -1.61
PDE6D-204ENST00000477748 MT1MQ8N339 61 aa4.99□□□□□ -1.61
PDE6D-204ENST00000477748 KRTAP23-1A1A580 65 aa4.98□□□□□ -1.61
PDE6D-204ENST00000477748 MT4P47944 62 aa4.97□□□□□ -1.61
PDE6D-204ENST00000477748 SVIPQ8NHG7 77 aa4.95□□□□□ -1.62
PDE6D-204ENST00000477748 KRTAP5-7Q6L8G8 165 aa4.94□□□□□ -1.62
PDE6D-204ENST00000477748 KRTAP12-3P60328 96 aa4.93□□□□□ -1.62
PDE6D-204ENST00000477748 KRTAP25-1Q3LHN0 102 aa4.93□□□□□ -1.62
PDE6D-204ENST00000477748 A6NED7 52 aa4.88□□□□□ -1.63
PDE6D-204ENST00000477748 KRTAP4-3Q9BYR4 195 aa4.88□□□□□ -1.63
PDE6D-204ENST00000477748 PCP4P48539 62 aa4.82□□□□□ -1.64
PDE6D-204ENST00000477748 RPS28P62857 69 aaKnown RBP4.82□□□□□ -1.64
PDE6D-204ENST00000477748 KRTAP5-4Q6L8H1 288 aa4.81□□□□□ -1.64
PDE6D-204ENST00000477748 SPRR5A0A1B0GTR4 108 aa4.8□□□□□ -1.64
PDE6D-204ENST00000477748 CDC42SE1Q9NRR8 79 aa4.73□□□□□ -1.65
PDE6D-204ENST00000477748 ROMO1P60602 79 aa4.65□□□□□ -1.67
PDE6D-204ENST00000477748 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.65□□□□□ -1.67
PDE6D-204ENST00000477748 KRTAP5-11Q6L8G4 156 aa4.59□□□□□ -1.67
PDE6D-204ENST00000477748 KRTAP5-5Q701N2 237 aaPredicted RBP4.58□□□□□ -1.68
PDE6D-204ENST00000477748 KRTAP20-2Q3LI61 65 aa4.55□□□□□ -1.68
PDE6D-204ENST00000477748 LCE3CQ5T5A8 94 aa4.54□□□□□ -1.68
PDE6D-204ENST00000477748 KRTAP12-4P60329 112 aa4.5□□□□□ -1.69
PDE6D-204ENST00000477748 SYNE1Q8NF91 8797 aaKnown RBP4.45□□□□□ -1.7
PDE6D-204ENST00000477748 AHNAKQ09666 5890 aaKnown RBP4.39□□□□□ -1.71
PDE6D-204ENST00000477748 MUC5ACP98088 5654 aa4.3□□□□□ -1.72
PDE6D-204ENST00000477748 MT1AP04731 61 aa4.29□□□□□ -1.72
PDE6D-204ENST00000477748 KRTAP9-6A8MVA2 160 aa4.26□□□□□ -1.73
PDE6D-204ENST00000477748 BRK1Q8WUW1 75 aa4.26□□□□□ -1.73
PDE6D-204ENST00000477748 KRTAP6-1Q3LI64 71 aa4.25□□□□□ -1.73
PDE6D-204ENST00000477748 MUC5BQ9HC84 5762 aaPredicted RBP4.25□□□□□ -1.73
PDE6D-204ENST00000477748 LCE1EQ5T753 118 aa4.24□□□□□ -1.73
PDE6D-204ENST00000477748 KRTAP5-2Q701N4 177 aa4.2□□□□□ -1.74
PDE6D-204ENST00000477748 KRTAP5-8O75690 187 aa4.17□□□□□ -1.74
PDE6D-204ENST00000477748 A0A0A0MQY5 61 aa4.16□□□□□ -1.74
PDE6D-204ENST00000477748 KRTAP6-2Q3LI66 62 aa4.05□□□□□ -1.76
PDE6D-204ENST00000477748 PMAIP1Q13794 54 aa4.01□□□□□ -1.77
PDE6D-204ENST00000477748 KRTAP5-1Q6L8H4 278 aa4.01□□□□□ -1.77
PDE6D-204ENST00000477748 OBSCNQ5VST9 7968 aa3.99□□□□□ -1.77
PDE6D-204ENST00000477748 MT3P25713 68 aa3.92□□□□□ -1.78
PDE6D-204ENST00000477748 KRTAP4-4Q9BYR3 166 aa3.88□□□□□ -1.79
PDE6D-204ENST00000477748 PRAC1Q96KF2 57 aa3.85□□□□□ -1.79
PDE6D-204ENST00000477748 PRO0628Q9UI54 55 aa3.73□□□□□ -1.81
PDE6D-204ENST00000477748 LCE1FQ5T754 118 aa3.57□□□□□ -1.84
PDE6D-204ENST00000477748 KTN1-AS1Q86SY8 53 aa3.57□□□□□ -1.84
PDE6D-204ENST00000477748 NDUFAF8A1L188 74 aa3.39□□□□□ -1.87
PDE6D-204ENST00000477748 LCE1BQ5T7P3 118 aa3.38□□□□□ -1.87
PDE6D-204ENST00000477748 LCE1CQ5T751 118 aa3.35□□□□□ -1.87
PDE6D-204ENST00000477748 LCE3DQ9BYE3 92 aa3.29□□□□□ -1.88
PDE6D-204ENST00000477748 LUZP6Q538Z0 58 aa3.26□□□□□ -1.89
PDE6D-204ENST00000477748 LCE3EQ5T5B0 92 aa3.12□□□□□ -1.91
PDE6D-204ENST00000477748 PHGR1C9JFL3 82 aa2.97□□□□□ -1.93
PDE6D-204ENST00000477748 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
PDE6D-204ENST00000477748 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
PDE6D-204ENST00000477748 PRM1P04553 51 aa2.39□□□□□ -2.03
PDE6D-204ENST00000477748 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
PDE6D-204ENST00000477748 INE1O15225 51 aa2.12□□□□□ -2.07
PDE6D-204ENST00000477748 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 111.4 ms