RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 NISCHQ9Y2I1 1504 aa34.71■■■■□ 3.15
PDE6D-204ENST00000477748 CCDC180Q9P1Z9 1646 aa31.09■■■□□ 2.57
PDE6D-204ENST00000477748 ABCC9O60706 1549 aa30.83■■■□□ 2.53
PDE6D-204ENST00000477748 RB1CC1Q8TDY2 1594 aa29.5■■■□□ 2.31
PDE6D-204ENST00000477748 NACADO15069 1562 aa29.36■■■□□ 2.29
PDE6D-204ENST00000477748 DNAJC5BQ9UF47 199 aa29.3■■■□□ 2.28
PDE6D-204ENST00000477748 DCAF8L2P0C7V8 631 aa29.11■■■□□ 2.25
PDE6D-204ENST00000477748 MYO15BQ96JP2 1530 aa29.07■■■□□ 2.24
PDE6D-204ENST00000477748 ZCCHC6Q5VYS8 1495 aaKnown RBP28.83■■■□□ 2.21
PDE6D-204ENST00000477748 DCAF1Q9Y4B6 1507 aa28.74■■■□□ 2.19
PDE6D-204ENST00000477748 UNC13AQ9UPW8 1703 aa28.72■■■□□ 2.19
PDE6D-204ENST00000477748 PABPN1Q86U42 306 aaKnown RBP eCLIP28.71■■■□□ 2.19
PDE6D-204ENST00000477748 BICRAQ9NZM4 1560 aa28.58■■■□□ 2.17
PDE6D-204ENST00000477748 SHROOM4Q9ULL8 1493 aa28.38■■■□□ 2.13
PDE6D-204ENST00000477748 SCRIBQ14160 1630 aa28.28■■■□□ 2.12
PDE6D-204ENST00000477748 EIF4G1Q04637 1599 aaKnown RBP27.9■■■□□ 2.06
PDE6D-204ENST00000477748 CC2D2AQ9P2K1 1620 aa27.88■■■□□ 2.05
PDE6D-204ENST00000477748 CECR2Q9BXF3 1484 aa27.8■■■□□ 2.04
PDE6D-204ENST00000477748 DNAJC5Q9H3Z4 198 aa27.42■■□□□ 1.98
PDE6D-204ENST00000477748 NCAPD3P42695 1498 aa27.09■■□□□ 1.93
PDE6D-204ENST00000477748 SMARCA4P51532 1647 aa27.02■■□□□ 1.92
PDE6D-204ENST00000477748 ATAD2BQ9ULI0 1458 aa27.02■■□□□ 1.92
PDE6D-204ENST00000477748 SMARCA2P51531 1590 aa26.99■■□□□ 1.91
PDE6D-204ENST00000477748 BAZ1AQ9NRL2 1556 aaPredicted RBP26.96■■□□□ 1.91
PDE6D-204ENST00000477748 HMGXB3Q12766 1538 aa26.93■■□□□ 1.9
PDE6D-204ENST00000477748 PEG3Q9GZU2 1588 aa26.81■■□□□ 1.88
PDE6D-204ENST00000477748 BAZ1BQ9UIG0 1483 aaKnown RBP26.78■■□□□ 1.88
PDE6D-204ENST00000477748 MROH2BQ7Z745 1585 aa26.71■■□□□ 1.87
PDE6D-204ENST00000477748 ERCC6Q03468 1493 aa26.67■■□□□ 1.86
PDE6D-204ENST00000477748 CUX2O14529 1486 aa26.62■■□□□ 1.85
PDE6D-204ENST00000477748 NESP48681 1621 aa26.52■■□□□ 1.84
PDE6D-204ENST00000477748 LAMC3Q9Y6N6 1575 aa26.45■■□□□ 1.82
PDE6D-204ENST00000477748 WIZO95785 1651 aa26.36■■□□□ 1.81
PDE6D-204ENST00000477748 PDS5BQ9NTI5 1447 aa26.31■■□□□ 1.8
PDE6D-204ENST00000477748 CADPSQ9ULU8 1353 aa26.27■■□□□ 1.8
PDE6D-204ENST00000477748 THOC2Q8NI27 1593 aaKnown RBP26.27■■□□□ 1.8
PDE6D-204ENST00000477748 RSF1Q96T23 1441 aaPredicted RBP26.25■■□□□ 1.79
PDE6D-204ENST00000477748 AEBP2Q6ZN18 517 aaPredicted RBP26.22■■□□□ 1.79
PDE6D-204ENST00000477748 KIF21AQ7Z4S6 1674 aa26.18■■□□□ 1.78
PDE6D-204ENST00000477748 TOP2AP11388 1531 aaKnown RBP26.13■■□□□ 1.77
PDE6D-204ENST00000477748 MRC2Q9UBG0 1479 aa26.05■■□□□ 1.76
PDE6D-204ENST00000477748 CFTRP13569 1480 aa26.02■■□□□ 1.76
PDE6D-204ENST00000477748 WDR62O43379 1518 aa25.98■■□□□ 1.75
PDE6D-204ENST00000477748 CEP164Q9UPV0 1460 aa25.98■■□□□ 1.75
PDE6D-204ENST00000477748 FANCD2Q9BXW9 1451 aa25.97■■□□□ 1.75
PDE6D-204ENST00000477748 TRIM41Q8WV44 630 aa25.91■■□□□ 1.74
PDE6D-204ENST00000477748 CCDC88BA6NC98 1476 aa25.79■■□□□ 1.72
PDE6D-204ENST00000477748 PRDM2Q13029 1718 aa25.72■■□□□ 1.71
PDE6D-204ENST00000477748 URB2Q14146 1524 aaKnown RBP25.72■■□□□ 1.71
PDE6D-204ENST00000477748 ABCC8Q09428 1581 aa25.5■■□□□ 1.67
PDE6D-204ENST00000477748 SUPT5HO00267 1087 aaKnown RBP25.49■■□□□ 1.67
PDE6D-204ENST00000477748 TOPBP1Q92547 1522 aa25.48■■□□□ 1.67
PDE6D-204ENST00000477748 IFT140Q96RY7 1462 aa25.48■■□□□ 1.67
PDE6D-204ENST00000477748 DNMBPQ6XZF7 1577 aa25.43■■□□□ 1.66
PDE6D-204ENST00000477748 OSCARQ8IYS5 282 aa25.35■■□□□ 1.65
PDE6D-204ENST00000477748 ZNF608Q9ULD9 1512 aaPredicted RBP25.35■■□□□ 1.65
PDE6D-204ENST00000477748 EIF4G3O43432 1585 aaKnown RBP25.25■■□□□ 1.63
PDE6D-204ENST00000477748 POLA1P09884 1462 aaPredicted RBP25.24■■□□□ 1.63
PDE6D-204ENST00000477748 TARBP1Q13395 1621 aaKnown RBP25.23■■□□□ 1.63
PDE6D-204ENST00000477748 AQRO60306 1485 aaKnown RBP eCLIP25.14■■□□□ 1.61
PDE6D-204ENST00000477748 SOGA1O94964 1423 aa25.12■■□□□ 1.61
PDE6D-204ENST00000477748 FGD5Q6ZNL6 1462 aa25.1■■□□□ 1.61
PDE6D-204ENST00000477748 RAD54L2Q9Y4B4 1467 aa25.1■■□□□ 1.61
PDE6D-204ENST00000477748 CUX1P39880 1505 aa25.1■■□□□ 1.61
PDE6D-204ENST00000477748 WDR97A6NE52 1622 aa25.08■■□□□ 1.6
PDE6D-204ENST00000477748 RIMBP3CA6NJZ7 1639 aa25.07■■□□□ 1.6
PDE6D-204ENST00000477748 RIMBP3BA6NNM3 1639 aa25.07■■□□□ 1.6
PDE6D-204ENST00000477748 RIMBP3Q9UFD9 1639 aa25.07■■□□□ 1.6
PDE6D-204ENST00000477748 TDRD9Q8NDG6 1382 aaKnown RBP25.02■■□□□ 1.6
PDE6D-204ENST00000477748 CHD1O14646 1710 aa24.97■■□□□ 1.59
PDE6D-204ENST00000477748 ARHGEF11O15085 1522 aa24.96■■□□□ 1.59
PDE6D-204ENST00000477748 FBLN2P98095 1184 aa24.93■■□□□ 1.58
PDE6D-204ENST00000477748 SNAPC4Q5SXM2 1469 aa24.92■■□□□ 1.58
PDE6D-204ENST00000477748 MAGI1Q96QZ7 1491 aaPredicted RBP24.92■■□□□ 1.58
PDE6D-204ENST00000477748 GRIN2BQ13224 1484 aa24.91■■□□□ 1.58
PDE6D-204ENST00000477748 ABCA10Q8WWZ4 1543 aa24.86■■□□□ 1.57
PDE6D-204ENST00000477748 GAPVD1Q14C86 1478 aa24.83■■□□□ 1.57
PDE6D-204ENST00000477748 SYNJ2O15056 1496 aa24.82■■□□□ 1.56
PDE6D-204ENST00000477748 CHMP7Q8WUX9 453 aaPredicted RBP24.81■■□□□ 1.56
PDE6D-204ENST00000477748 WRNQ14191 1432 aaPredicted RBP eCLIP24.8■■□□□ 1.56
PDE6D-204ENST00000477748 ABCA5Q8WWZ7 1642 aa24.79■■□□□ 1.56
PDE6D-204ENST00000477748 SYNJ1O43426 1573 aa24.78■■□□□ 1.56
PDE6D-204ENST00000477748 TOP2BQ02880 1626 aa24.77■■□□□ 1.56
PDE6D-204ENST00000477748 PBRM1Q86U86 1689 aa24.76■■□□□ 1.55
PDE6D-204ENST00000477748 CLASP1Q7Z460 1538 aa24.76■■□□□ 1.55
PDE6D-204ENST00000477748 BIVM-ERCC5R4GMW8 1640 aa24.75■■□□□ 1.55
PDE6D-204ENST00000477748 CYB5RLQ6IPT4 315 aa24.74■■□□□ 1.55
PDE6D-204ENST00000477748 ARAP1Q96P48 1450 aa24.71■■□□□ 1.55
PDE6D-204ENST00000477748 TRHP20396 242 aaPredicted RBP24.69■■□□□ 1.54
PDE6D-204ENST00000477748 CHIC1Q5VXU3 224 aa24.63■■□□□ 1.53
PDE6D-204ENST00000477748 ADAMTS12P58397 1594 aa24.59■■□□□ 1.53
PDE6D-204ENST00000477748 GRIN2AQ12879 1464 aa24.58■■□□□ 1.53
PDE6D-204ENST00000477748 ERICH3Q5RHP9 1530 aa24.56■■□□□ 1.52
PDE6D-204ENST00000477748 FHAD1B1AJZ9 1412 aa24.55■■□□□ 1.52
PDE6D-204ENST00000477748 NUP160Q12769 1436 aa24.51■■□□□ 1.51
PDE6D-204ENST00000477748 CEP170Q5SW79 1584 aa24.45■■□□□ 1.5
PDE6D-204ENST00000477748 SHROOM2Q13796 1616 aa24.35■■□□□ 1.49
PDE6D-204ENST00000477748 KIF27Q86VH2 1401 aa24.32■■□□□ 1.48
PDE6D-204ENST00000477748 ERCC6L2Q5T890 1561 aa24.31■■□□□ 1.48
PDE6D-204ENST00000477748 IGF1RP08069 1367 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms