RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 DMAC1Q96GE9 116 aa5□□□□□ -1.61
SMG5-204ENST00000476954 C10orf95Q9H7T3 257 aa4.97□□□□□ -1.61
SMG5-204ENST00000476954 H7BZZ5 65 aa4.96□□□□□ -1.62
SMG5-204ENST00000476954 LOC100996750A0A140TA64 210 aa4.91□□□□□ -1.62
SMG5-204ENST00000476954 LCE3AQ5TA76 89 aa4.9□□□□□ -1.63
SMG5-204ENST00000476954 KRTAP5-2Q701N4 177 aa4.87□□□□□ -1.63
SMG5-204ENST00000476954 KRTAP9-9Q9BYP9 154 aa4.87□□□□□ -1.63
SMG5-204ENST00000476954 SPANXA2-OT1Q8N9U9 137 aa4.86□□□□□ -1.63
SMG5-204ENST00000476954 TMEM258P61165 79 aa4.83□□□□□ -1.64
SMG5-204ENST00000476954 OBSCNQ5VST9 7968 aa4.77□□□□□ -1.65
SMG5-204ENST00000476954 ATP5EP56381 51 aaPredicted RBP4.76□□□□□ -1.65
SMG5-204ENST00000476954 SPTSSBQ8NFR3 76 aa4.74□□□□□ -1.65
SMG5-204ENST00000476954 COA5Q86WW8 74 aa4.73□□□□□ -1.65
SMG5-204ENST00000476954 ACYP2P14621 99 aa4.71□□□□□ -1.66
SMG5-204ENST00000476954 SPINT4Q6UDR6 99 aa4.71□□□□□ -1.66
SMG5-204ENST00000476954 SERP1Q9Y6X1 66 aa4.67□□□□□ -1.66
SMG5-204ENST00000476954 KRTAP12-3P60328 96 aa4.66□□□□□ -1.66
SMG5-204ENST00000476954 CHKB-CPT1BH3BT56 60 aa4.61□□□□□ -1.67
SMG5-204ENST00000476954 KRTAP12-1P59990 96 aa4.61□□□□□ -1.67
SMG5-204ENST00000476954 RPS28P62857 69 aaKnown RBP4.6□□□□□ -1.67
SMG5-204ENST00000476954 KRTAP6-1Q3LI64 71 aa4.6□□□□□ -1.67
SMG5-204ENST00000476954 SPATA8Q6RVD6 105 aa4.58□□□□□ -1.68
SMG5-204ENST00000476954 TNP1P09430 55 aa4.55□□□□□ -1.68
SMG5-204ENST00000476954 KRTAP6-2Q3LI66 62 aa4.54□□□□□ -1.68
SMG5-204ENST00000476954 KRTAP5-1Q6L8H4 278 aa4.53□□□□□ -1.68
SMG5-204ENST00000476954 SMIM26A0A096LP01 95 aa4.52□□□□□ -1.69
SMG5-204ENST00000476954 MT1AP04731 61 aa4.52□□□□□ -1.69
SMG5-204ENST00000476954 LINC01558Q9Y6Z2 57 aa4.5□□□□□ -1.69
SMG5-204ENST00000476954 Q1T7F1 81 aa4.48□□□□□ -1.69
SMG5-204ENST00000476954 KRTAP9-4Q9BYQ2 154 aa4.48□□□□□ -1.69
SMG5-204ENST00000476954 PRR15LQ9BU68 103 aa4.42□□□□□ -1.7
SMG5-204ENST00000476954 V9GYY9 64 aa4.42□□□□□ -1.7
SMG5-204ENST00000476954 A0A1B0GU69 56 aa4.41□□□□□ -1.7
SMG5-204ENST00000476954 SEC61GP60059 68 aa4.41□□□□□ -1.7
SMG5-204ENST00000476954 PSPHP1O15172 72 aa4.4□□□□□ -1.71
SMG5-204ENST00000476954 A0A1B0GU33 70 aa4.33□□□□□ -1.72
SMG5-204ENST00000476954 SVIPQ8NHG7 77 aa4.3□□□□□ -1.72
SMG5-204ENST00000476954 A8MU10 97 aa4.27□□□□□ -1.73
SMG5-204ENST00000476954 UQCR11O14957 56 aa4.25□□□□□ -1.73
SMG5-204ENST00000476954 A6NED7 52 aa4.22□□□□□ -1.73
SMG5-204ENST00000476954 MIR22HGQ0VDD5 57 aa4.21□□□□□ -1.74
SMG5-204ENST00000476954 LCE3CQ5T5A8 94 aa4.21□□□□□ -1.74
SMG5-204ENST00000476954 KRTAP25-1Q3LHN0 102 aa4.17□□□□□ -1.74
SMG5-204ENST00000476954 KRTAP19-4Q3LI73 84 aa4.17□□□□□ -1.74
SMG5-204ENST00000476954 CDC42SE1Q9NRR8 79 aa4.17□□□□□ -1.74
SMG5-204ENST00000476954 MT3P25713 68 aa4.14□□□□□ -1.75
SMG5-204ENST00000476954 BRK1Q8WUW1 75 aa4.11□□□□□ -1.75
SMG5-204ENST00000476954 KRTAP9-6A8MVA2 160 aa4.08□□□□□ -1.76
SMG5-204ENST00000476954 K7ERS5 55 aa4.06□□□□□ -1.76
SMG5-204ENST00000476954 KRTAP15-1Q3LI76 137 aa4.06□□□□□ -1.76
SMG5-204ENST00000476954 PRO0628Q9UI54 55 aa4.02□□□□□ -1.77
SMG5-204ENST00000476954 LCE1EQ5T753 118 aa3.97□□□□□ -1.77
SMG5-204ENST00000476954 KRTAP4-2Q9BYR5 136 aa3.92□□□□□ -1.78
SMG5-204ENST00000476954 LCE1BQ5T7P3 118 aa3.9□□□□□ -1.79
SMG5-204ENST00000476954 KRTAP4-12Q9BQ66 201 aa3.9□□□□□ -1.79
SMG5-204ENST00000476954 ROMO1P60602 79 aa3.86□□□□□ -1.79
SMG5-204ENST00000476954 PMAIP1Q13794 54 aa3.85□□□□□ -1.79
SMG5-204ENST00000476954 PRAC1Q96KF2 57 aa3.71□□□□□ -1.82
SMG5-204ENST00000476954 KTN1-AS1Q86SY8 53 aa3.7□□□□□ -1.82
SMG5-204ENST00000476954 LCE1CQ5T751 118 aa3.69□□□□□ -1.82
SMG5-204ENST00000476954 KRTAP23-1A1A580 65 aa3.65□□□□□ -1.83
SMG5-204ENST00000476954 PHGR1C9JFL3 82 aa3.64□□□□□ -1.83
SMG5-204ENST00000476954 KRTAP5-11Q6L8G4 156 aa3.62□□□□□ -1.83
SMG5-204ENST00000476954 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
SMG5-204ENST00000476954 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.26□□□□□ -1.89
SMG5-204ENST00000476954 KRTAP21-2Q3LI59 83 aa3.03□□□□□ -1.92
SMG5-204ENST00000476954 LUZP6Q538Z0 58 aa3.03□□□□□ -1.92
SMG5-204ENST00000476954 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
SMG5-204ENST00000476954 KRTAP4-4Q9BYR3 166 aa2.97□□□□□ -1.93
SMG5-204ENST00000476954 H3BS24 57 aa2.96□□□□□ -1.94
SMG5-204ENST00000476954 NDUFAF8A1L188 74 aa2.84□□□□□ -1.95
SMG5-204ENST00000476954 LCE3DQ9BYE3 92 aa2.84□□□□□ -1.95
SMG5-204ENST00000476954 KRTAP21-1Q3LI58 79 aa2.73□□□□□ -1.97
SMG5-204ENST00000476954 A0A0A0MQY5 61 aa2.69□□□□□ -1.98
SMG5-204ENST00000476954 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
SMG5-204ENST00000476954 INE1O15225 51 aa2.48□□□□□ -2.01
SMG5-204ENST00000476954 MUC16Q8WXI7 14507 aa2.1□□□□□ -2.07
SMG5-204ENST00000476954 PRM1P04553 51 aa2.04□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 66.1 ms