RNA–Protein interactions for RNA: ENST00000475818.5

HDAC11-217, Transcript of histone deacetylase 11, humanhuman

TSL 3

Gene HDAC11, Length 1,271 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-217ENST00000475818 SMIM26A0A096LP01 95 aa7.05□□□□□ -1.28
HDAC11-217ENST00000475818 KRTAP20-2Q3LI61 65 aa7.04□□□□□ -1.28
HDAC11-217ENST00000475818 LINC01558Q9Y6Z2 57 aa6.99□□□□□ -1.29
HDAC11-217ENST00000475818 KRTAP13-4Q3LI77 160 aa6.96□□□□□ -1.3
HDAC11-217ENST00000475818 V9GYY9 64 aa6.96□□□□□ -1.3
HDAC11-217ENST00000475818 Q1T7F1 81 aa6.95□□□□□ -1.3
HDAC11-217ENST00000475818 A0A1B0GU69 56 aa6.93□□□□□ -1.3
HDAC11-217ENST00000475818 SEC61GP60059 68 aa6.93□□□□□ -1.3
HDAC11-217ENST00000475818 PRR15LQ9BU68 103 aa6.89□□□□□ -1.31
HDAC11-217ENST00000475818 PSPHP1O15172 72 aa6.82□□□□□ -1.32
HDAC11-217ENST00000475818 AHNAKQ09666 5890 aaKnown RBP6.8□□□□□ -1.32
HDAC11-217ENST00000475818 KRTAP4-7Q9BYR0 210 aa6.78□□□□□ -1.32
HDAC11-217ENST00000475818 A0A1B0GU33 70 aa6.77□□□□□ -1.33
HDAC11-217ENST00000475818 KRTAP12-4P60329 112 aa6.75□□□□□ -1.33
HDAC11-217ENST00000475818 C10orf95Q9H7T3 257 aa6.74□□□□□ -1.33
HDAC11-217ENST00000475818 KRTAP5-5Q701N2 237 aaPredicted RBP6.71□□□□□ -1.34
HDAC11-217ENST00000475818 MUC5ACP98088 5654 aa6.69□□□□□ -1.34
HDAC11-217ENST00000475818 SYNE1Q8NF91 8797 aaKnown RBP6.69□□□□□ -1.34
HDAC11-217ENST00000475818 UQCR11O14957 56 aa6.68□□□□□ -1.34
HDAC11-217ENST00000475818 LCE3AQ5TA76 89 aa6.66□□□□□ -1.34
HDAC11-217ENST00000475818 SPATA8Q6RVD6 105 aa6.65□□□□□ -1.34
HDAC11-217ENST00000475818 A6NED7 52 aa6.63□□□□□ -1.35
HDAC11-217ENST00000475818 SPINT4Q6UDR6 99 aa6.63□□□□□ -1.35
HDAC11-217ENST00000475818 KRTAP4-11Q9BYQ6 195 aa6.62□□□□□ -1.35
HDAC11-217ENST00000475818 MUC5BQ9HC84 5762 aaPredicted RBP6.61□□□□□ -1.35
HDAC11-217ENST00000475818 MIR22HGQ0VDD5 57 aa6.6□□□□□ -1.35
HDAC11-217ENST00000475818 A8MU10 97 aa6.54□□□□□ -1.36
HDAC11-217ENST00000475818 CDC42SE1Q9NRR8 79 aa6.51□□□□□ -1.37
HDAC11-217ENST00000475818 LOC100996750A0A140TA64 210 aa6.47□□□□□ -1.37
HDAC11-217ENST00000475818 KRTAP5-8O75690 187 aa6.47□□□□□ -1.37
HDAC11-217ENST00000475818 KRTAP12-1P59990 96 aa6.46□□□□□ -1.38
HDAC11-217ENST00000475818 BRK1Q8WUW1 75 aa6.41□□□□□ -1.38
HDAC11-217ENST00000475818 KRTAP12-3P60328 96 aa6.37□□□□□ -1.39
HDAC11-217ENST00000475818 TNP1P09430 55 aa6.36□□□□□ -1.39
HDAC11-217ENST00000475818 K7ERS5 55 aa6.33□□□□□ -1.4
HDAC11-217ENST00000475818 KRTAP5-2Q701N4 177 aa6.31□□□□□ -1.4
HDAC11-217ENST00000475818 KRTAP9-9Q9BYP9 154 aa6.23□□□□□ -1.41
HDAC11-217ENST00000475818 OBSCNQ5VST9 7968 aa6.2□□□□□ -1.42
HDAC11-217ENST00000475818 PRO0628Q9UI54 55 aa6.18□□□□□ -1.42
HDAC11-217ENST00000475818 KRTAP6-1Q3LI64 71 aa6.06□□□□□ -1.44
HDAC11-217ENST00000475818 ROMO1P60602 79 aa6.04□□□□□ -1.44
HDAC11-217ENST00000475818 PMAIP1Q13794 54 aa6.04□□□□□ -1.44
HDAC11-217ENST00000475818 MT1AP04731 61 aa6.02□□□□□ -1.45
HDAC11-217ENST00000475818 KRTAP6-2Q3LI66 62 aa5.96□□□□□ -1.46
HDAC11-217ENST00000475818 KRTAP25-1Q3LHN0 102 aa5.93□□□□□ -1.46
HDAC11-217ENST00000475818 KRTAP9-4Q9BYQ2 154 aa5.89□□□□□ -1.47
HDAC11-217ENST00000475818 KRTAP5-1Q6L8H4 278 aa5.82□□□□□ -1.48
HDAC11-217ENST00000475818 KRTAP19-4Q3LI73 84 aa5.8□□□□□ -1.48
HDAC11-217ENST00000475818 LCE3CQ5T5A8 94 aa5.77□□□□□ -1.49
HDAC11-217ENST00000475818 KTN1-AS1Q86SY8 53 aa5.77□□□□□ -1.49
HDAC11-217ENST00000475818 KRTAP23-1A1A580 65 aa5.73□□□□□ -1.49
HDAC11-217ENST00000475818 PRAC1Q96KF2 57 aa5.7□□□□□ -1.5
HDAC11-217ENST00000475818 KRTAP15-1Q3LI76 137 aa5.65□□□□□ -1.5
HDAC11-217ENST00000475818 MT3P25713 68 aa5.53□□□□□ -1.52
HDAC11-217ENST00000475818 KRTAP9-6A8MVA2 160 aa5.51□□□□□ -1.53
HDAC11-217ENST00000475818 SVIPQ8NHG7 77 aa5.44□□□□□ -1.54
HDAC11-217ENST00000475818 LCE1EQ5T753 118 aa5.23□□□□□ -1.57
HDAC11-217ENST00000475818 LCE1BQ5T7P3 118 aa5.11□□□□□ -1.59
HDAC11-217ENST00000475818 KRTAP4-2Q9BYR5 136 aa5.08□□□□□ -1.6
HDAC11-217ENST00000475818 KRTAP4-12Q9BQ66 201 aa4.98□□□□□ -1.61
HDAC11-217ENST00000475818 LCE1CQ5T751 118 aa4.86□□□□□ -1.63
HDAC11-217ENST00000475818 LUZP6Q538Z0 58 aa4.66□□□□□ -1.66
HDAC11-217ENST00000475818 KRTAP5-11Q6L8G4 156 aa4.63□□□□□ -1.67
HDAC11-217ENST00000475818 PHGR1C9JFL3 82 aa4.59□□□□□ -1.67
HDAC11-217ENST00000475818 H3BS24 57 aa4.53□□□□□ -1.68
HDAC11-217ENST00000475818 LCE1FQ5T754 118 aa4.53□□□□□ -1.68
HDAC11-217ENST00000475818 NDUFAF8A1L188 74 aa4.42□□□□□ -1.7
HDAC11-217ENST00000475818 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.31□□□□□ -1.72
HDAC11-217ENST00000475818 LCE3DQ9BYE3 92 aa3.99□□□□□ -1.77
HDAC11-217ENST00000475818 KRTAP21-2Q3LI59 83 aa3.98□□□□□ -1.77
HDAC11-217ENST00000475818 MUC19Q7Z5P9 8384 aa3.9□□□□□ -1.79
HDAC11-217ENST00000475818 KRTAP4-4Q9BYR3 166 aa3.86□□□□□ -1.79
HDAC11-217ENST00000475818 A0A0A0MQY5 61 aa3.83□□□□□ -1.8
HDAC11-217ENST00000475818 LCE3EQ5T5B0 92 aa3.69□□□□□ -1.82
HDAC11-217ENST00000475818 INE1O15225 51 aa3.66□□□□□ -1.82
HDAC11-217ENST00000475818 KRTAP21-1Q3LI58 79 aa3.46□□□□□ -1.86
HDAC11-217ENST00000475818 PRM1P04553 51 aa3.14□□□□□ -1.91
HDAC11-217ENST00000475818 MUC16Q8WXI7 14507 aa2.72□□□□□ -1.97
Retrieved 78 of 20,778 RNA–protein pairs in 25.7 ms