RNA–Protein interactions for RNA: ENST00000474249.5

GAPDH-208, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,333 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-208ENST00000474249 LINC01554Q52M75 96 aa5.08□□□□□ -1.6
GAPDH-208ENST00000474249 AHNAK2Q8IVF2 5795 aa5.04□□□□□ -1.6
GAPDH-208ENST00000474249 KRTAP19-7Q3SYF9 63 aa5.03□□□□□ -1.6
GAPDH-208ENST00000474249 KRTAP19-3Q7Z4W3 81 aa4.98□□□□□ -1.61
GAPDH-208ENST00000474249 A6NED7 52 aa4.97□□□□□ -1.61
GAPDH-208ENST00000474249 MT1EP04732 61 aa4.97□□□□□ -1.61
GAPDH-208ENST00000474249 A0A1B0GU33 70 aa4.96□□□□□ -1.62
GAPDH-208ENST00000474249 UQCR11O14957 56 aa4.96□□□□□ -1.62
GAPDH-208ENST00000474249 SPATA8Q6RVD6 105 aa4.93□□□□□ -1.62
GAPDH-208ENST00000474249 BRK1Q8WUW1 75 aa4.93□□□□□ -1.62
GAPDH-208ENST00000474249 CDC42SE1Q9NRR8 79 aa4.93□□□□□ -1.62
GAPDH-208ENST00000474249 MIR22HGQ0VDD5 57 aa4.91□□□□□ -1.62
GAPDH-208ENST00000474249 A8MU10 97 aa4.9□□□□□ -1.63
GAPDH-208ENST00000474249 KRTAP5-3Q6L8H2 238 aa4.89□□□□□ -1.63
GAPDH-208ENST00000474249 KRTAP13-4Q3LI77 160 aa4.88□□□□□ -1.63
GAPDH-208ENST00000474249 KRTAP5-10Q6L8G5 202 aa4.88□□□□□ -1.63
GAPDH-208ENST00000474249 MT4P47944 62 aa4.85□□□□□ -1.63
GAPDH-208ENST00000474249 PMAIP1Q13794 54 aa4.85□□□□□ -1.63
GAPDH-208ENST00000474249 MT1GP13640 62 aa4.83□□□□□ -1.64
GAPDH-208ENST00000474249 KRTAP5-4Q6L8H1 288 aa4.81□□□□□ -1.64
GAPDH-208ENST00000474249 KRTAP19-5Q3LI72 72 aa4.75□□□□□ -1.65
GAPDH-208ENST00000474249 MT1MQ8N339 61 aa4.75□□□□□ -1.65
GAPDH-208ENST00000474249 A0A0D9SG42 100 aa4.73□□□□□ -1.65
GAPDH-208ENST00000474249 KRTAP5-7Q6L8G8 165 aa4.73□□□□□ -1.65
GAPDH-208ENST00000474249 PP632Q6XCG6 107 aa4.72□□□□□ -1.65
GAPDH-208ENST00000474249 CAMK2N1Q7Z7J9 78 aa4.71□□□□□ -1.66
GAPDH-208ENST00000474249 KRTAP12-1P59990 96 aa4.7□□□□□ -1.66
GAPDH-208ENST00000474249 MT1LQ93083 61 aa4.69□□□□□ -1.66
GAPDH-208ENST00000474249 KRTAP4-3Q9BYR4 195 aa4.68□□□□□ -1.66
GAPDH-208ENST00000474249 K7ERS5 55 aa4.66□□□□□ -1.66
GAPDH-208ENST00000474249 KTN1-AS1Q86SY8 53 aa4.63□□□□□ -1.67
GAPDH-208ENST00000474249 SPINT4Q6UDR6 99 aa4.62□□□□□ -1.67
GAPDH-208ENST00000474249 KRTAP20-2Q3LI61 65 aa4.51□□□□□ -1.69
GAPDH-208ENST00000474249 ROMO1P60602 79 aa4.49□□□□□ -1.69
GAPDH-208ENST00000474249 SPRR5A0A1B0GTR4 108 aa4.46□□□□□ -1.69
GAPDH-208ENST00000474249 C10orf95Q9H7T3 257 aa4.46□□□□□ -1.69
GAPDH-208ENST00000474249 KRTAP5-5Q701N2 237 aaPredicted RBP4.46□□□□□ -1.7
GAPDH-208ENST00000474249 LCE3AQ5TA76 89 aa4.44□□□□□ -1.7
GAPDH-208ENST00000474249 A0A0A0MQY5 61 aa4.41□□□□□ -1.7
GAPDH-208ENST00000474249 SYNE1Q8NF91 8797 aaKnown RBP4.41□□□□□ -1.7
GAPDH-208ENST00000474249 PRAC1Q96KF2 57 aa4.38□□□□□ -1.71
GAPDH-208ENST00000474249 KRTAP12-4P60329 112 aa4.32□□□□□ -1.72
GAPDH-208ENST00000474249 KRTAP25-1Q3LHN0 102 aa4.32□□□□□ -1.72
GAPDH-208ENST00000474249 KRTAP15-1Q3LI76 137 aa4.32□□□□□ -1.72
GAPDH-208ENST00000474249 TNP1P09430 55 aa4.28□□□□□ -1.72
GAPDH-208ENST00000474249 AHNAKQ09666 5890 aaKnown RBP4.28□□□□□ -1.72
GAPDH-208ENST00000474249 KRTAP12-3P60328 96 aa4.25□□□□□ -1.73
GAPDH-208ENST00000474249 KRTAP23-1A1A580 65 aa4.24□□□□□ -1.73
GAPDH-208ENST00000474249 MUC5ACP98088 5654 aa4.22□□□□□ -1.73
GAPDH-208ENST00000474249 MUC5BQ9HC84 5762 aaPredicted RBP4.22□□□□□ -1.73
GAPDH-208ENST00000474249 KRTAP5-2Q701N4 177 aa4.16□□□□□ -1.74
GAPDH-208ENST00000474249 KRTAP5-8O75690 187 aa4.11□□□□□ -1.75
GAPDH-208ENST00000474249 OBSCNQ5VST9 7968 aa4.05□□□□□ -1.76
GAPDH-208ENST00000474249 KRTAP6-1Q3LI64 71 aa3.98□□□□□ -1.77
GAPDH-208ENST00000474249 MT1AP04731 61 aa3.97□□□□□ -1.77
GAPDH-208ENST00000474249 LCE3CQ5T5A8 94 aa3.91□□□□□ -1.78
GAPDH-208ENST00000474249 KRTAP6-2Q3LI66 62 aa3.87□□□□□ -1.79
GAPDH-208ENST00000474249 LUZP6Q538Z0 58 aa3.85□□□□□ -1.79
GAPDH-208ENST00000474249 KRTAP5-1Q6L8H4 278 aa3.79□□□□□ -1.8
GAPDH-208ENST00000474249 KRTAP9-6A8MVA2 160 aa3.77□□□□□ -1.81
GAPDH-208ENST00000474249 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.66□□□□□ -1.82
GAPDH-208ENST00000474249 NDUFAF8A1L188 74 aa3.65□□□□□ -1.83
GAPDH-208ENST00000474249 KRTAP5-11Q6L8G4 156 aa3.64□□□□□ -1.83
GAPDH-208ENST00000474249 MT3P25713 68 aa3.63□□□□□ -1.83
GAPDH-208ENST00000474249 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
GAPDH-208ENST00000474249 INE1O15225 51 aa3.28□□□□□ -1.88
GAPDH-208ENST00000474249 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
GAPDH-208ENST00000474249 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
GAPDH-208ENST00000474249 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
GAPDH-208ENST00000474249 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
GAPDH-208ENST00000474249 PHGR1C9JFL3 82 aa2.79□□□□□ -1.96
GAPDH-208ENST00000474249 LCE3DQ9BYE3 92 aa2.75□□□□□ -1.97
GAPDH-208ENST00000474249 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
GAPDH-208ENST00000474249 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
GAPDH-208ENST00000474249 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
GAPDH-208ENST00000474249 PRM1P04553 51 aa2.35□□□□□ -2.03
GAPDH-208ENST00000474249 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
GAPDH-208ENST00000474249 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 93.5 ms