RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, humanhuman

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-223ENST00000472807 KRTAP5-11Q6L8G4 156 aa3.45□□□□□ -1.86
CHEK2-223ENST00000472807 PRO0628Q9UI54 55 aa3.43□□□□□ -1.86
CHEK2-223ENST00000472807 SEC61GP60059 68 aa3.41□□□□□ -1.86
CHEK2-223ENST00000472807 BRK1Q8WUW1 75 aa3.41□□□□□ -1.86
CHEK2-223ENST00000472807 A0A1B0GU69 56 aa3.4□□□□□ -1.87
CHEK2-223ENST00000472807 SVIPQ8NHG7 77 aa3.39□□□□□ -1.87
CHEK2-223ENST00000472807 A0A0D9SG42 100 aa3.38□□□□□ -1.87
CHEK2-223ENST00000472807 A6NED7 52 aa3.38□□□□□ -1.87
CHEK2-223ENST00000472807 CDC42SE1Q9NRR8 79 aa3.37□□□□□ -1.87
CHEK2-223ENST00000472807 DSTQ03001 7570 aaKnown RBP3.37□□□□□ -1.87
CHEK2-223ENST00000472807 GPR98Q8WXG9 6306 aa3.36□□□□□ -1.87
CHEK2-223ENST00000472807 UQCR11O14957 56 aa3.34□□□□□ -1.87
CHEK2-223ENST00000472807 KRTAP19-7Q3SYF9 63 aa3.34□□□□□ -1.87
CHEK2-223ENST00000472807 A0A1B0GU33 70 aa3.33□□□□□ -1.88
CHEK2-223ENST00000472807 MT1EP04732 61 aa3.33□□□□□ -1.88
CHEK2-223ENST00000472807 SPATA8Q6RVD6 105 aa3.33□□□□□ -1.88
CHEK2-223ENST00000472807 SPINT4Q6UDR6 99 aa3.33□□□□□ -1.88
CHEK2-223ENST00000472807 KRTAP19-3Q7Z4W3 81 aa3.32□□□□□ -1.88
CHEK2-223ENST00000472807 MIR22HGQ0VDD5 57 aa3.29□□□□□ -1.88
CHEK2-223ENST00000472807 KRTAP12-1P59990 96 aa3.28□□□□□ -1.88
CHEK2-223ENST00000472807 KRTAP19-5Q3LI72 72 aa3.26□□□□□ -1.89
CHEK2-223ENST00000472807 A8MU10 97 aa3.25□□□□□ -1.89
CHEK2-223ENST00000472807 LCE1EQ5T753 118 aa3.25□□□□□ -1.89
CHEK2-223ENST00000472807 HMCN1Q96RW7 5635 aa3.25□□□□□ -1.89
CHEK2-223ENST00000472807 PMAIP1Q13794 54 aa3.24□□□□□ -1.89
CHEK2-223ENST00000472807 PP632Q6XCG6 107 aa3.23□□□□□ -1.89
CHEK2-223ENST00000472807 MT1GP13640 62 aa3.22□□□□□ -1.89
CHEK2-223ENST00000472807 K7ERS5 55 aa3.17□□□□□ -1.9
CHEK2-223ENST00000472807 TNP1P09430 55 aa3.17□□□□□ -1.9
CHEK2-223ENST00000472807 MT1MQ8N339 61 aa3.17□□□□□ -1.9
CHEK2-223ENST00000472807 MT1LQ93083 61 aa3.17□□□□□ -1.9
CHEK2-223ENST00000472807 KTN1-AS1Q86SY8 53 aa3.16□□□□□ -1.9
CHEK2-223ENST00000472807 LCE3AQ5TA76 89 aa3.15□□□□□ -1.91
CHEK2-223ENST00000472807 C10orf95Q9H7T3 257 aa3.15□□□□□ -1.91
CHEK2-223ENST00000472807 AHNAK2Q8IVF2 5795 aa3.14□□□□□ -1.91
CHEK2-223ENST00000472807 MT4P47944 62 aa3.12□□□□□ -1.91
CHEK2-223ENST00000472807 KRTAP4-3Q9BYR4 195 aa3.09□□□□□ -1.91
CHEK2-223ENST00000472807 KRTAP5-1Q6L8H4 278 aa3.07□□□□□ -1.92
CHEK2-223ENST00000472807 KRTAP5-4Q6L8H1 288 aa3.05□□□□□ -1.92
CHEK2-223ENST00000472807 KRTAP12-3P60328 96 aa3.04□□□□□ -1.92
CHEK2-223ENST00000472807 ROMO1P60602 79 aa3.02□□□□□ -1.93
CHEK2-223ENST00000472807 MT3P25713 68 aa2.97□□□□□ -1.93
CHEK2-223ENST00000472807 KRTAP25-1Q3LHN0 102 aa2.96□□□□□ -1.94
CHEK2-223ENST00000472807 KRTAP5-10Q6L8G5 202 aa2.96□□□□□ -1.94
CHEK2-223ENST00000472807 PRAC1Q96KF2 57 aa2.96□□□□□ -1.94
CHEK2-223ENST00000472807 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
CHEK2-223ENST00000472807 KRTAP5-5Q701N2 237 aaPredicted RBP2.91□□□□□ -1.94
CHEK2-223ENST00000472807 KRTAP20-2Q3LI61 65 aa2.9□□□□□ -1.95
CHEK2-223ENST00000472807 SPRR5A0A1B0GTR4 108 aa2.88□□□□□ -1.95
CHEK2-223ENST00000472807 KRTAP12-4P60329 112 aa2.88□□□□□ -1.95
CHEK2-223ENST00000472807 KRTAP5-7Q6L8G8 165 aa2.85□□□□□ -1.95
CHEK2-223ENST00000472807 SYNE1Q8NF91 8797 aaKnown RBP2.81□□□□□ -1.96
CHEK2-223ENST00000472807 LCE3CQ5T5A8 94 aa2.79□□□□□ -1.96
CHEK2-223ENST00000472807 KRTAP9-6A8MVA2 160 aa2.78□□□□□ -1.96
CHEK2-223ENST00000472807 OBSCNQ5VST9 7968 aa2.77□□□□□ -1.97
CHEK2-223ENST00000472807 MT1AP04731 61 aa2.7□□□□□ -1.98
CHEK2-223ENST00000472807 KRTAP6-1Q3LI64 71 aa2.68□□□□□ -1.98
CHEK2-223ENST00000472807 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
CHEK2-223ENST00000472807 KRTAP5-2Q701N4 177 aa2.67□□□□□ -1.98
CHEK2-223ENST00000472807 MUC5BQ9HC84 5762 aaPredicted RBP2.64□□□□□ -1.99
CHEK2-223ENST00000472807 AHNAKQ09666 5890 aaKnown RBP2.63□□□□□ -1.99
CHEK2-223ENST00000472807 KRTAP6-2Q3LI66 62 aa2.58□□□□□ -2
CHEK2-223ENST00000472807 MUC5ACP98088 5654 aa2.57□□□□□ -2
CHEK2-223ENST00000472807 KRTAP5-8O75690 187 aa2.56□□□□□ -2
CHEK2-223ENST00000472807 LUZP6Q538Z0 58 aa2.48□□□□□ -2.01
CHEK2-223ENST00000472807 A0A0A0MQY5 61 aa2.45□□□□□ -2.02
CHEK2-223ENST00000472807 NDUFAF8A1L188 74 aa2.43□□□□□ -2.02
CHEK2-223ENST00000472807 LCE3EQ5T5B0 92 aa2.33□□□□□ -2.04
CHEK2-223ENST00000472807 LCE1BQ5T7P3 118 aa2.17□□□□□ -2.06
CHEK2-223ENST00000472807 LCE1CQ5T751 118 aa2.12□□□□□ -2.07
CHEK2-223ENST00000472807 INE1O15225 51 aa2.1□□□□□ -2.07
CHEK2-223ENST00000472807 LCE3DQ9BYE3 92 aa2□□□□□ -2.09
CHEK2-223ENST00000472807 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
CHEK2-223ENST00000472807 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
CHEK2-223ENST00000472807 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
CHEK2-223ENST00000472807 PRM1P04553 51 aa1.56□□□□□ -2.16
CHEK2-223ENST00000472807 KRTAP21-1Q3LI58 79 aa1.33□□□□□ -2.2
CHEK2-223ENST00000472807 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 100.6 ms