RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 SMIM20Q8N5G0 67 aa6.25□□□□□ -1.41
NCKIPSD-209ENST00000470006 TMEM258P61165 79 aa6.23□□□□□ -1.41
NCKIPSD-209ENST00000470006 KRTAP5-5Q701N2 237 aaPredicted RBP6.23□□□□□ -1.41
NCKIPSD-209ENST00000470006 KRTAP12-1P59990 96 aa6.2□□□□□ -1.42
NCKIPSD-209ENST00000470006 RPS28P62857 69 aaKnown RBP6.2□□□□□ -1.42
NCKIPSD-209ENST00000470006 SEC61GP60059 68 aa6.18□□□□□ -1.42
NCKIPSD-209ENST00000470006 SERP1Q9Y6X1 66 aa6.18□□□□□ -1.42
NCKIPSD-209ENST00000470006 TNP1P09430 55 aa6.15□□□□□ -1.42
NCKIPSD-209ENST00000470006 SYNE1Q8NF91 8797 aaKnown RBP6.14□□□□□ -1.43
NCKIPSD-209ENST00000470006 KRTAP4-11Q9BYQ6 195 aa6.12□□□□□ -1.43
NCKIPSD-209ENST00000470006 A0A1B0GU33 70 aa6.09□□□□□ -1.43
NCKIPSD-209ENST00000470006 SNURFQ9Y675 71 aa6.08□□□□□ -1.44
NCKIPSD-209ENST00000470006 H7BZZ5 65 aa6.07□□□□□ -1.44
NCKIPSD-209ENST00000470006 KRTAP12-3P60328 96 aa6.07□□□□□ -1.44
NCKIPSD-209ENST00000470006 AHNAKQ09666 5890 aaKnown RBP6.07□□□□□ -1.44
NCKIPSD-209ENST00000470006 ATP5EP56381 51 aaPredicted RBP6.05□□□□□ -1.44
NCKIPSD-209ENST00000470006 LOC100996750A0A140TA64 210 aa6.04□□□□□ -1.44
NCKIPSD-209ENST00000470006 SPANXA2-OT1Q8N9U9 137 aa6.02□□□□□ -1.45
NCKIPSD-209ENST00000470006 MUC5ACP98088 5654 aa6.01□□□□□ -1.45
NCKIPSD-209ENST00000470006 MUC5BQ9HC84 5762 aaPredicted RBP5.97□□□□□ -1.45
NCKIPSD-209ENST00000470006 COA5Q86WW8 74 aa5.95□□□□□ -1.46
NCKIPSD-209ENST00000470006 KRTAP5-8O75690 187 aa5.94□□□□□ -1.46
NCKIPSD-209ENST00000470006 SMIM26A0A096LP01 95 aa5.93□□□□□ -1.46
NCKIPSD-209ENST00000470006 A8MU10 97 aa5.88□□□□□ -1.47
NCKIPSD-209ENST00000470006 KRTAP5-2Q701N4 177 aa5.83□□□□□ -1.48
NCKIPSD-209ENST00000470006 KRTAP9-9Q9BYP9 154 aa5.79□□□□□ -1.48
NCKIPSD-209ENST00000470006 PRO0628Q9UI54 55 aa5.74□□□□□ -1.49
NCKIPSD-209ENST00000470006 Q1T7F1 81 aa5.72□□□□□ -1.49
NCKIPSD-209ENST00000470006 A0A1B0GU69 56 aa5.7□□□□□ -1.5
NCKIPSD-209ENST00000470006 KRTAP6-1Q3LI64 71 aa5.67□□□□□ -1.5
NCKIPSD-209ENST00000470006 V9GYY9 64 aa5.67□□□□□ -1.5
NCKIPSD-209ENST00000470006 MT1AP04731 61 aa5.64□□□□□ -1.51
NCKIPSD-209ENST00000470006 OBSCNQ5VST9 7968 aa5.63□□□□□ -1.51
NCKIPSD-209ENST00000470006 BRK1Q8WUW1 75 aa5.63□□□□□ -1.51
NCKIPSD-209ENST00000470006 KRTAP19-4Q3LI73 84 aa5.6□□□□□ -1.51
NCKIPSD-209ENST00000470006 KRTAP6-2Q3LI66 62 aa5.57□□□□□ -1.52
NCKIPSD-209ENST00000470006 KRTAP25-1Q3LHN0 102 aa5.54□□□□□ -1.52
NCKIPSD-209ENST00000470006 KRTAP9-4Q9BYQ2 154 aa5.54□□□□□ -1.52
NCKIPSD-209ENST00000470006 PSPHP1O15172 72 aa5.53□□□□□ -1.52
NCKIPSD-209ENST00000470006 LCE3CQ5T5A8 94 aa5.51□□□□□ -1.53
NCKIPSD-209ENST00000470006 PRR15LQ9BU68 103 aa5.49□□□□□ -1.53
NCKIPSD-209ENST00000470006 LINC01558Q9Y6Z2 57 aa5.49□□□□□ -1.53
NCKIPSD-209ENST00000470006 KRTAP15-1Q3LI76 137 aa5.43□□□□□ -1.54
NCKIPSD-209ENST00000470006 CDC42SE1Q9NRR8 79 aa5.39□□□□□ -1.55
NCKIPSD-209ENST00000470006 A6NED7 52 aa5.38□□□□□ -1.55
NCKIPSD-209ENST00000470006 KRTAP5-1Q6L8H4 278 aa5.37□□□□□ -1.55
NCKIPSD-209ENST00000470006 PMAIP1Q13794 54 aa5.36□□□□□ -1.55
NCKIPSD-209ENST00000470006 KTN1-AS1Q86SY8 53 aa5.28□□□□□ -1.56
NCKIPSD-209ENST00000470006 MT3P25713 68 aa5.22□□□□□ -1.57
NCKIPSD-209ENST00000470006 KRTAP9-6A8MVA2 160 aa5.17□□□□□ -1.58
NCKIPSD-209ENST00000470006 UQCR11O14957 56 aa5.15□□□□□ -1.59
NCKIPSD-209ENST00000470006 KRTAP23-1A1A580 65 aa5.13□□□□□ -1.59
NCKIPSD-209ENST00000470006 MIR22HGQ0VDD5 57 aa5.13□□□□□ -1.59
NCKIPSD-209ENST00000470006 K7ERS5 55 aa5.04□□□□□ -1.6
NCKIPSD-209ENST00000470006 PRAC1Q96KF2 57 aa4.95□□□□□ -1.62
NCKIPSD-209ENST00000470006 LCE1EQ5T753 118 aa4.9□□□□□ -1.63
NCKIPSD-209ENST00000470006 LCE1BQ5T7P3 118 aa4.79□□□□□ -1.64
NCKIPSD-209ENST00000470006 ROMO1P60602 79 aa4.7□□□□□ -1.66
NCKIPSD-209ENST00000470006 KRTAP4-2Q9BYR5 136 aa4.69□□□□□ -1.66
NCKIPSD-209ENST00000470006 KRTAP4-12Q9BQ66 201 aa4.59□□□□□ -1.67
NCKIPSD-209ENST00000470006 LCE1CQ5T751 118 aa4.56□□□□□ -1.68
NCKIPSD-209ENST00000470006 H3BS24 57 aa4.36□□□□□ -1.71
NCKIPSD-209ENST00000470006 KRTAP5-11Q6L8G4 156 aa4.26□□□□□ -1.73
NCKIPSD-209ENST00000470006 PHGR1C9JFL3 82 aa4.22□□□□□ -1.73
NCKIPSD-209ENST00000470006 LCE1FQ5T754 118 aa4.22□□□□□ -1.73
NCKIPSD-209ENST00000470006 NDUFAF8A1L188 74 aa4.15□□□□□ -1.75
NCKIPSD-209ENST00000470006 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.02□□□□□ -1.77
NCKIPSD-209ENST00000470006 LUZP6Q538Z0 58 aa3.94□□□□□ -1.78
NCKIPSD-209ENST00000470006 LCE3DQ9BYE3 92 aa3.85□□□□□ -1.79
NCKIPSD-209ENST00000470006 A0A0A0MQY5 61 aa3.77□□□□□ -1.81
NCKIPSD-209ENST00000470006 KRTAP21-2Q3LI59 83 aa3.71□□□□□ -1.82
NCKIPSD-209ENST00000470006 KRTAP4-4Q9BYR3 166 aa3.59□□□□□ -1.83
NCKIPSD-209ENST00000470006 MUC19Q7Z5P9 8384 aa3.53□□□□□ -1.84
NCKIPSD-209ENST00000470006 LCE3EQ5T5B0 92 aa3.51□□□□□ -1.85
NCKIPSD-209ENST00000470006 INE1O15225 51 aa3.48□□□□□ -1.85
NCKIPSD-209ENST00000470006 KRTAP21-1Q3LI58 79 aa3.19□□□□□ -1.9
NCKIPSD-209ENST00000470006 MUC16Q8WXI7 14507 aa2.48□□□□□ -2.01
NCKIPSD-209ENST00000470006 PRM1P04553 51 aa2.48□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 11.6 ms