RNA–Protein interactions for RNA: ENST00000465628.1

SCAP-209, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-209ENST00000465628 K7ERS5 55 aa5.48□□□□□ -1.53
SCAP-209ENST00000465628 KRTAP4-9Q9BYQ8 210 aa5.48□□□□□ -1.53
SCAP-209ENST00000465628 V9GYY9 64 aa5.45□□□□□ -1.54
SCAP-209ENST00000465628 PSPHP1O15172 72 aa5.44□□□□□ -1.54
SCAP-209ENST00000465628 KRTAP12-3P60328 96 aa5.42□□□□□ -1.54
SCAP-209ENST00000465628 KRTAP4-3Q9BYR4 195 aa5.38□□□□□ -1.55
SCAP-209ENST00000465628 GPR98Q8WXG9 6306 aa5.37□□□□□ -1.55
SCAP-209ENST00000465628 KRTAP25-1Q3LHN0 102 aa5.37□□□□□ -1.55
SCAP-209ENST00000465628 MT4P47944 62 aa5.34□□□□□ -1.55
SCAP-209ENST00000465628 Q1T7F1 81 aa5.34□□□□□ -1.55
SCAP-209ENST00000465628 LCE1DQ5T752 114 aa5.34□□□□□ -1.55
SCAP-209ENST00000465628 LCE4AQ5TA78 99 aa5.33□□□□□ -1.56
SCAP-209ENST00000465628 A6NED7 52 aa5.28□□□□□ -1.56
SCAP-209ENST00000465628 KRTAP4-7Q9BYR0 210 aa5.27□□□□□ -1.57
SCAP-209ENST00000465628 HMCN1Q96RW7 5635 aa5.24□□□□□ -1.57
SCAP-209ENST00000465628 PCP4P48539 62 aa5.19□□□□□ -1.58
SCAP-209ENST00000465628 KRTAP5-4Q6L8H1 288 aa5.18□□□□□ -1.58
SCAP-209ENST00000465628 CDC42SE1Q9NRR8 79 aa5.16□□□□□ -1.58
SCAP-209ENST00000465628 KRTAP4-6Q9BYQ5 205 aa5.11□□□□□ -1.59
SCAP-209ENST00000465628 KRTAP23-1A1A580 65 aa5.1□□□□□ -1.59
SCAP-209ENST00000465628 KRTAP15-1Q3LI76 137 aa5.06□□□□□ -1.6
SCAP-209ENST00000465628 AHNAK2Q8IVF2 5795 aa5.05□□□□□ -1.6
SCAP-209ENST00000465628 ROMO1P60602 79 aa5.04□□□□□ -1.6
SCAP-209ENST00000465628 RPS28P62857 69 aaKnown RBP5.03□□□□□ -1.6
SCAP-209ENST00000465628 KRTAP19-4Q3LI73 84 aa5.03□□□□□ -1.6
SCAP-209ENST00000465628 KRTAP5-5Q701N2 237 aaPredicted RBP5□□□□□ -1.61
SCAP-209ENST00000465628 LOC100996750A0A140TA64 210 aa4.99□□□□□ -1.61
SCAP-209ENST00000465628 KRTAP12-4P60329 112 aa4.96□□□□□ -1.62
SCAP-209ENST00000465628 LCE3CQ5T5A8 94 aa4.96□□□□□ -1.62
SCAP-209ENST00000465628 KRTAP20-2Q3LI61 65 aa4.94□□□□□ -1.62
SCAP-209ENST00000465628 KRTAP5-10Q6L8G5 202 aa4.91□□□□□ -1.62
SCAP-209ENST00000465628 SPRR5A0A1B0GTR4 108 aa4.9□□□□□ -1.63
SCAP-209ENST00000465628 KRTAP5-3Q6L8H2 238 aa4.82□□□□□ -1.64
SCAP-209ENST00000465628 SYNE1Q8NF91 8797 aaKnown RBP4.78□□□□□ -1.64
SCAP-209ENST00000465628 MT1AP04731 61 aa4.71□□□□□ -1.66
SCAP-209ENST00000465628 KRTAP5-7Q6L8G8 165 aa4.71□□□□□ -1.66
SCAP-209ENST00000465628 KRTAP6-1Q3LI64 71 aa4.69□□□□□ -1.66
SCAP-209ENST00000465628 KRTAP9-6A8MVA2 160 aa4.63□□□□□ -1.67
SCAP-209ENST00000465628 BRK1Q8WUW1 75 aa4.56□□□□□ -1.68
SCAP-209ENST00000465628 KRTAP5-2Q701N4 177 aa4.55□□□□□ -1.68
SCAP-209ENST00000465628 KRTAP9-4Q9BYQ2 154 aa4.54□□□□□ -1.68
SCAP-209ENST00000465628 KRTAP4-11Q9BYQ6 195 aa4.5□□□□□ -1.69
SCAP-209ENST00000465628 KRTAP6-2Q3LI66 62 aa4.49□□□□□ -1.69
SCAP-209ENST00000465628 MT3P25713 68 aa4.33□□□□□ -1.72
SCAP-209ENST00000465628 KRTAP5-8O75690 187 aa4.32□□□□□ -1.72
SCAP-209ENST00000465628 PMAIP1Q13794 54 aa4.25□□□□□ -1.73
SCAP-209ENST00000465628 OBSCNQ5VST9 7968 aa4.2□□□□□ -1.74
SCAP-209ENST00000465628 KRTAP9-9Q9BYP9 154 aa4.17□□□□□ -1.74
SCAP-209ENST00000465628 AHNAKQ09666 5890 aaKnown RBP4.15□□□□□ -1.75
SCAP-209ENST00000465628 MUC5ACP98088 5654 aa4.13□□□□□ -1.75
SCAP-209ENST00000465628 MUC5BQ9HC84 5762 aaPredicted RBP4.12□□□□□ -1.75
SCAP-209ENST00000465628 PRAC1Q96KF2 57 aa4.11□□□□□ -1.75
SCAP-209ENST00000465628 PRO0628Q9UI54 55 aa4.09□□□□□ -1.75
SCAP-209ENST00000465628 KRTAP5-1Q6L8H4 278 aa4.07□□□□□ -1.76
SCAP-209ENST00000465628 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
SCAP-209ENST00000465628 KTN1-AS1Q86SY8 53 aa3.83□□□□□ -1.8
SCAP-209ENST00000465628 LCE1BQ5T7P3 118 aa3.79□□□□□ -1.8
SCAP-209ENST00000465628 SVIPQ8NHG7 77 aa3.74□□□□□ -1.81
SCAP-209ENST00000465628 KRTAP4-2Q9BYR5 136 aa3.7□□□□□ -1.82
SCAP-209ENST00000465628 LCE1CQ5T751 118 aa3.63□□□□□ -1.83
SCAP-209ENST00000465628 LCE3DQ9BYE3 92 aa3.6□□□□□ -1.83
SCAP-209ENST00000465628 LUZP6Q538Z0 58 aa3.54□□□□□ -1.84
SCAP-209ENST00000465628 KRTAP4-12Q9BQ66 201 aa3.4□□□□□ -1.87
SCAP-209ENST00000465628 LCE3EQ5T5B0 92 aa3.39□□□□□ -1.87
SCAP-209ENST00000465628 KRTAP5-11Q6L8G4 156 aa3.31□□□□□ -1.88
SCAP-209ENST00000465628 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.29□□□□□ -1.88
SCAP-209ENST00000465628 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
SCAP-209ENST00000465628 KRTAP21-2Q3LI59 83 aa3.04□□□□□ -1.92
SCAP-209ENST00000465628 NDUFAF8A1L188 74 aa2.92□□□□□ -1.94
SCAP-209ENST00000465628 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
SCAP-209ENST00000465628 KRTAP4-4Q9BYR3 166 aa2.86□□□□□ -1.95
SCAP-209ENST00000465628 MUC19Q7Z5P9 8384 aa2.61□□□□□ -1.99
SCAP-209ENST00000465628 PRM1P04553 51 aa2.59□□□□□ -1.99
SCAP-209ENST00000465628 A0A0A0MQY5 61 aa2.45□□□□□ -2.02
SCAP-209ENST00000465628 INE1O15225 51 aa2.38□□□□□ -2.03
SCAP-209ENST00000465628 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
SCAP-209ENST00000465628 H3BS24 57 aa2.01□□□□□ -2.09
SCAP-209ENST00000465628 MUC16Q8WXI7 14507 aa1.88□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 113.7 ms