RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 Q1T7F1 81 aa5.56□□□□□ -1.52
HDAC6-214ENST00000465269 V9GYY9 64 aa5.56□□□□□ -1.52
HDAC6-214ENST00000465269 PSPHP1O15172 72 aa5.54□□□□□ -1.52
HDAC6-214ENST00000465269 A8MU10 97 aa5.52□□□□□ -1.53
HDAC6-214ENST00000465269 KRTAP5-4Q6L8H1 288 aa5.51□□□□□ -1.53
HDAC6-214ENST00000465269 SPINT4Q6UDR6 99 aa5.5□□□□□ -1.53
HDAC6-214ENST00000465269 UQCR11O14957 56 aa5.49□□□□□ -1.53
HDAC6-214ENST00000465269 KRTAP12-1P59990 96 aa5.47□□□□□ -1.53
HDAC6-214ENST00000465269 CAMK2N1Q7Z7J9 78 aa5.45□□□□□ -1.54
HDAC6-214ENST00000465269 MT1GP13640 62 aa5.41□□□□□ -1.54
HDAC6-214ENST00000465269 MIR22HGQ0VDD5 57 aa5.41□□□□□ -1.54
HDAC6-214ENST00000465269 SVIPQ8NHG7 77 aa5.41□□□□□ -1.54
HDAC6-214ENST00000465269 KRTAP4-3Q9BYR4 195 aa5.41□□□□□ -1.54
HDAC6-214ENST00000465269 MT1MQ8N339 61 aa5.39□□□□□ -1.55
HDAC6-214ENST00000465269 A6NED7 52 aa5.36□□□□□ -1.55
HDAC6-214ENST00000465269 PP632Q6XCG6 107 aa5.33□□□□□ -1.56
HDAC6-214ENST00000465269 KRTAP19-5Q3LI72 72 aa5.31□□□□□ -1.56
HDAC6-214ENST00000465269 KRTAP20-2Q3LI61 65 aa5.29□□□□□ -1.56
HDAC6-214ENST00000465269 AHNAKQ09666 5890 aaKnown RBP5.25□□□□□ -1.57
HDAC6-214ENST00000465269 MT1LQ93083 61 aa5.23□□□□□ -1.57
HDAC6-214ENST00000465269 K7ERS5 55 aa5.22□□□□□ -1.57
HDAC6-214ENST00000465269 C10orf95Q9H7T3 257 aa5.21□□□□□ -1.58
HDAC6-214ENST00000465269 CDC42SE1Q9NRR8 79 aa5.16□□□□□ -1.58
HDAC6-214ENST00000465269 MUC5ACP98088 5654 aa5.15□□□□□ -1.58
HDAC6-214ENST00000465269 MUC5BQ9HC84 5762 aaPredicted RBP5.12□□□□□ -1.59
HDAC6-214ENST00000465269 TNP1P09430 55 aa5.11□□□□□ -1.59
HDAC6-214ENST00000465269 KRTAP4-7Q9BYR0 210 aa5.06□□□□□ -1.6
HDAC6-214ENST00000465269 SYNE1Q8NF91 8797 aaKnown RBP5.04□□□□□ -1.6
HDAC6-214ENST00000465269 BRK1Q8WUW1 75 aa5.01□□□□□ -1.61
HDAC6-214ENST00000465269 KRTAP4-11Q9BYQ6 195 aa4.99□□□□□ -1.61
HDAC6-214ENST00000465269 KRTAP12-4P60329 112 aa4.98□□□□□ -1.61
HDAC6-214ENST00000465269 LCE3AQ5TA76 89 aa4.98□□□□□ -1.61
HDAC6-214ENST00000465269 KRTAP5-5Q701N2 237 aaPredicted RBP4.98□□□□□ -1.61
HDAC6-214ENST00000465269 KRTAP25-1Q3LHN0 102 aa4.97□□□□□ -1.61
HDAC6-214ENST00000465269 ROMO1P60602 79 aa4.95□□□□□ -1.62
HDAC6-214ENST00000465269 KRTAP5-8O75690 187 aa4.91□□□□□ -1.62
HDAC6-214ENST00000465269 LOC100996750A0A140TA64 210 aa4.83□□□□□ -1.64
HDAC6-214ENST00000465269 OBSCNQ5VST9 7968 aa4.77□□□□□ -1.65
HDAC6-214ENST00000465269 KRTAP23-1A1A580 65 aa4.77□□□□□ -1.65
HDAC6-214ENST00000465269 KRTAP12-3P60328 96 aa4.77□□□□□ -1.65
HDAC6-214ENST00000465269 PMAIP1Q13794 54 aa4.73□□□□□ -1.65
HDAC6-214ENST00000465269 KRTAP5-2Q701N4 177 aa4.7□□□□□ -1.66
HDAC6-214ENST00000465269 KRTAP9-9Q9BYP9 154 aa4.69□□□□□ -1.66
HDAC6-214ENST00000465269 PRO0628Q9UI54 55 aa4.65□□□□□ -1.67
HDAC6-214ENST00000465269 KRTAP15-1Q3LI76 137 aa4.58□□□□□ -1.68
HDAC6-214ENST00000465269 KRTAP6-1Q3LI64 71 aa4.5□□□□□ -1.69
HDAC6-214ENST00000465269 PRAC1Q96KF2 57 aa4.48□□□□□ -1.69
HDAC6-214ENST00000465269 KRTAP19-4Q3LI73 84 aa4.45□□□□□ -1.7
HDAC6-214ENST00000465269 KRTAP6-2Q3LI66 62 aa4.44□□□□□ -1.7
HDAC6-214ENST00000465269 LCE3CQ5T5A8 94 aa4.44□□□□□ -1.7
HDAC6-214ENST00000465269 MT1AP04731 61 aa4.4□□□□□ -1.71
HDAC6-214ENST00000465269 KRTAP5-1Q6L8H4 278 aa4.38□□□□□ -1.71
HDAC6-214ENST00000465269 KTN1-AS1Q86SY8 53 aa4.36□□□□□ -1.71
HDAC6-214ENST00000465269 KRTAP9-4Q9BYQ2 154 aa4.33□□□□□ -1.72
HDAC6-214ENST00000465269 KRTAP9-6A8MVA2 160 aa4.19□□□□□ -1.74
HDAC6-214ENST00000465269 MT3P25713 68 aa4.03□□□□□ -1.76
HDAC6-214ENST00000465269 H3BS24 57 aa4.02□□□□□ -1.77
HDAC6-214ENST00000465269 LCE1EQ5T753 118 aa3.83□□□□□ -1.8
HDAC6-214ENST00000465269 LCE1BQ5T7P3 118 aa3.81□□□□□ -1.8
HDAC6-214ENST00000465269 KRTAP4-12Q9BQ66 201 aa3.8□□□□□ -1.8
HDAC6-214ENST00000465269 KRTAP4-2Q9BYR5 136 aa3.8□□□□□ -1.8
HDAC6-214ENST00000465269 LUZP6Q538Z0 58 aa3.69□□□□□ -1.82
HDAC6-214ENST00000465269 LCE1CQ5T751 118 aa3.58□□□□□ -1.84
HDAC6-214ENST00000465269 PHGR1C9JFL3 82 aa3.5□□□□□ -1.85
HDAC6-214ENST00000465269 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
HDAC6-214ENST00000465269 NDUFAF8A1L188 74 aa3.34□□□□□ -1.87
HDAC6-214ENST00000465269 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
HDAC6-214ENST00000465269 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
HDAC6-214ENST00000465269 A0A0A0MQY5 61 aa3.24□□□□□ -1.89
HDAC6-214ENST00000465269 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
HDAC6-214ENST00000465269 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.14□□□□□ -1.91
HDAC6-214ENST00000465269 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
HDAC6-214ENST00000465269 KRTAP21-2Q3LI59 83 aa2.95□□□□□ -1.94
HDAC6-214ENST00000465269 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
HDAC6-214ENST00000465269 INE1O15225 51 aa2.76□□□□□ -1.97
HDAC6-214ENST00000465269 KRTAP21-1Q3LI58 79 aa2.6□□□□□ -1.99
HDAC6-214ENST00000465269 PRM1P04553 51 aa2.57□□□□□ -2
HDAC6-214ENST00000465269 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 72.2 ms