RNA–Protein interactions for RNA: ENST00000461349.5

C9orf78-202, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 3

Gene C9orf78, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-202ENST00000461349 LINC01558Q9Y6Z2 57 aa4.65□□□□□ -1.67
C9orf78-202ENST00000461349 A0A1B0GU33 70 aa4.6□□□□□ -1.67
C9orf78-202ENST00000461349 Q1T7F1 81 aa4.6□□□□□ -1.67
C9orf78-202ENST00000461349 PSPHP1O15172 72 aa4.57□□□□□ -1.68
C9orf78-202ENST00000461349 MT1MQ8N339 61 aa4.57□□□□□ -1.68
C9orf78-202ENST00000461349 LOC100996750A0A140TA64 210 aa4.54□□□□□ -1.68
C9orf78-202ENST00000461349 CAMK2N1Q7Z7J9 78 aa4.54□□□□□ -1.68
C9orf78-202ENST00000461349 UQCR11O14957 56 aa4.51□□□□□ -1.69
C9orf78-202ENST00000461349 KRTAP19-5Q3LI72 72 aa4.5□□□□□ -1.69
C9orf78-202ENST00000461349 SPATA8Q6RVD6 105 aa4.5□□□□□ -1.69
C9orf78-202ENST00000461349 PRO0628Q9UI54 55 aa4.5□□□□□ -1.69
C9orf78-202ENST00000461349 A0A0D9SG42 100 aa4.48□□□□□ -1.69
C9orf78-202ENST00000461349 A6NED7 52 aa4.47□□□□□ -1.69
C9orf78-202ENST00000461349 KRTAP13-4Q3LI77 160 aa4.46□□□□□ -1.7
C9orf78-202ENST00000461349 KRTAP4-3Q9BYR4 195 aa4.46□□□□□ -1.7
C9orf78-202ENST00000461349 MIR22HGQ0VDD5 57 aa4.45□□□□□ -1.7
C9orf78-202ENST00000461349 KRTAP20-2Q3LI61 65 aa4.45□□□□□ -1.7
C9orf78-202ENST00000461349 MT1LQ93083 61 aa4.44□□□□□ -1.7
C9orf78-202ENST00000461349 SPINT4Q6UDR6 99 aa4.41□□□□□ -1.7
C9orf78-202ENST00000461349 A8MU10 97 aa4.4□□□□□ -1.71
C9orf78-202ENST00000461349 K7ERS5 55 aa4.37□□□□□ -1.71
C9orf78-202ENST00000461349 H3BS24 57 aa4.33□□□□□ -1.72
C9orf78-202ENST00000461349 AHNAKQ09666 5890 aaKnown RBP4.33□□□□□ -1.72
C9orf78-202ENST00000461349 KRTAP12-1P59990 96 aa4.31□□□□□ -1.72
C9orf78-202ENST00000461349 KRTAP12-4P60329 112 aa4.31□□□□□ -1.72
C9orf78-202ENST00000461349 CDC42SE1Q9NRR8 79 aa4.3□□□□□ -1.72
C9orf78-202ENST00000461349 PMAIP1Q13794 54 aa4.27□□□□□ -1.73
C9orf78-202ENST00000461349 MUC5ACP98088 5654 aa4.26□□□□□ -1.73
C9orf78-202ENST00000461349 BRK1Q8WUW1 75 aa4.26□□□□□ -1.73
C9orf78-202ENST00000461349 KRTAP5-5Q701N2 237 aaPredicted RBP4.22□□□□□ -1.73
C9orf78-202ENST00000461349 C10orf95Q9H7T3 257 aa4.21□□□□□ -1.74
C9orf78-202ENST00000461349 KRTAP4-11Q9BYQ6 195 aa4.2□□□□□ -1.74
C9orf78-202ENST00000461349 KRTAP4-7Q9BYR0 210 aa4.19□□□□□ -1.74
C9orf78-202ENST00000461349 MUC5BQ9HC84 5762 aaPredicted RBP4.17□□□□□ -1.74
C9orf78-202ENST00000461349 A0A0A0MQY5 61 aa4.14□□□□□ -1.75
C9orf78-202ENST00000461349 LCE3AQ5TA76 89 aa4.14□□□□□ -1.75
C9orf78-202ENST00000461349 SYNE1Q8NF91 8797 aaKnown RBP4.13□□□□□ -1.75
C9orf78-202ENST00000461349 KRTAP5-8O75690 187 aa4.09□□□□□ -1.75
C9orf78-202ENST00000461349 TNP1P09430 55 aa4.09□□□□□ -1.75
C9orf78-202ENST00000461349 KTN1-AS1Q86SY8 53 aa4.08□□□□□ -1.76
C9orf78-202ENST00000461349 ROMO1P60602 79 aa4.07□□□□□ -1.76
C9orf78-202ENST00000461349 KRTAP25-1Q3LHN0 102 aa4.01□□□□□ -1.77
C9orf78-202ENST00000461349 KRTAP12-3P60328 96 aa3.99□□□□□ -1.77
C9orf78-202ENST00000461349 KRTAP9-9Q9BYP9 154 aa3.99□□□□□ -1.77
C9orf78-202ENST00000461349 KRTAP5-2Q701N4 177 aa3.97□□□□□ -1.77
C9orf78-202ENST00000461349 OBSCNQ5VST9 7968 aa3.95□□□□□ -1.78
C9orf78-202ENST00000461349 KRTAP23-1A1A580 65 aa3.85□□□□□ -1.79
C9orf78-202ENST00000461349 KRTAP9-4Q9BYQ2 154 aa3.8□□□□□ -1.8
C9orf78-202ENST00000461349 MT1AP04731 61 aa3.78□□□□□ -1.8
C9orf78-202ENST00000461349 KRTAP6-1Q3LI64 71 aa3.78□□□□□ -1.8
C9orf78-202ENST00000461349 PRAC1Q96KF2 57 aa3.75□□□□□ -1.81
C9orf78-202ENST00000461349 KRTAP6-2Q3LI66 62 aa3.74□□□□□ -1.81
C9orf78-202ENST00000461349 KRTAP19-4Q3LI73 84 aa3.74□□□□□ -1.81
C9orf78-202ENST00000461349 KRTAP5-1Q6L8H4 278 aa3.67□□□□□ -1.82
C9orf78-202ENST00000461349 KRTAP4-12Q9BQ66 201 aa3.65□□□□□ -1.83
C9orf78-202ENST00000461349 KRTAP15-1Q3LI76 137 aa3.63□□□□□ -1.83
C9orf78-202ENST00000461349 LCE3CQ5T5A8 94 aa3.61□□□□□ -1.83
C9orf78-202ENST00000461349 KRTAP4-2Q9BYR5 136 aa3.55□□□□□ -1.84
C9orf78-202ENST00000461349 LUZP6Q538Z0 58 aa3.52□□□□□ -1.85
C9orf78-202ENST00000461349 MT3P25713 68 aa3.51□□□□□ -1.85
C9orf78-202ENST00000461349 KRTAP9-6A8MVA2 160 aa3.38□□□□□ -1.87
C9orf78-202ENST00000461349 LCE1EQ5T753 118 aa3.34□□□□□ -1.87
C9orf78-202ENST00000461349 NDUFAF8A1L188 74 aa3.27□□□□□ -1.89
C9orf78-202ENST00000461349 LCE1BQ5T7P3 118 aa3.21□□□□□ -1.9
C9orf78-202ENST00000461349 LCE1CQ5T751 118 aa3.09□□□□□ -1.91
C9orf78-202ENST00000461349 KRTAP5-11Q6L8G4 156 aa2.94□□□□□ -1.94
C9orf78-202ENST00000461349 PHGR1C9JFL3 82 aa2.93□□□□□ -1.94
C9orf78-202ENST00000461349 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
C9orf78-202ENST00000461349 INE1O15225 51 aa2.86□□□□□ -1.95
C9orf78-202ENST00000461349 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
C9orf78-202ENST00000461349 LCE3DQ9BYE3 92 aa2.61□□□□□ -1.99
C9orf78-202ENST00000461349 LCE3EQ5T5B0 92 aa2.51□□□□□ -2.01
C9orf78-202ENST00000461349 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
C9orf78-202ENST00000461349 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
C9orf78-202ENST00000461349 KRTAP4-4Q9BYR3 166 aa2.38□□□□□ -2.03
C9orf78-202ENST00000461349 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
C9orf78-202ENST00000461349 PRM1P04553 51 aa2.1□□□□□ -2.07
C9orf78-202ENST00000461349 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 8.2 ms