RNA–Protein interactions for RNA: ENST00000460194.1

SRRT-206, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-206ENST00000460194 COA5Q86WW8 74 aa4.38□□□□□ -1.71
SRRT-206ENST00000460194 PCP4P48539 62 aa4.37□□□□□ -1.71
SRRT-206ENST00000460194 SERP1Q9Y6X1 66 aa4.36□□□□□ -1.71
SRRT-206ENST00000460194 SEC61GP60059 68 aa4.33□□□□□ -1.72
SRRT-206ENST00000460194 TNP1P09430 55 aa4.31□□□□□ -1.72
SRRT-206ENST00000460194 COX7CP15954 63 aa4.31□□□□□ -1.72
SRRT-206ENST00000460194 KRTAP12-3P60328 96 aa4.28□□□□□ -1.72
SRRT-206ENST00000460194 A8MU10 97 aa4.27□□□□□ -1.73
SRRT-206ENST00000460194 H7BZZ5 65 aa4.27□□□□□ -1.73
SRRT-206ENST00000460194 KRTAP12-4P60329 112 aa4.27□□□□□ -1.73
SRRT-206ENST00000460194 ANAPC13Q9BS18 74 aa4.26□□□□□ -1.73
SRRT-206ENST00000460194 SYNE1Q8NF91 8797 aaKnown RBP4.25□□□□□ -1.73
SRRT-206ENST00000460194 LOC100996750A0A140TA64 210 aa4.23□□□□□ -1.73
SRRT-206ENST00000460194 SMIM26A0A096LP01 95 aa4.22□□□□□ -1.73
SRRT-206ENST00000460194 KRTAP4-11Q9BYQ6 195 aa4.16□□□□□ -1.74
SRRT-206ENST00000460194 CCDC179H3BU77 68 aa4.15□□□□□ -1.75
SRRT-206ENST00000460194 A0A1B0GU69 56 aa4.12□□□□□ -1.75
SRRT-206ENST00000460194 KRTAP5-2Q701N4 177 aa4.11□□□□□ -1.75
SRRT-206ENST00000460194 KRTAP5-8O75690 187 aa4.06□□□□□ -1.76
SRRT-206ENST00000460194 ATP5EP56381 51 aaPredicted RBP4.05□□□□□ -1.76
SRRT-206ENST00000460194 KRTAP19-4Q3LI73 84 aa4.03□□□□□ -1.76
SRRT-206ENST00000460194 TMEM258P61165 79 aa4□□□□□ -1.77
SRRT-206ENST00000460194 MUC5ACP98088 5654 aa3.99□□□□□ -1.77
SRRT-206ENST00000460194 KRTAP6-1Q3LI64 71 aa3.98□□□□□ -1.77
SRRT-206ENST00000460194 MUC5BQ9HC84 5762 aaPredicted RBP3.98□□□□□ -1.77
SRRT-206ENST00000460194 MT1AP04731 61 aa3.96□□□□□ -1.78
SRRT-206ENST00000460194 AHNAKQ09666 5890 aaKnown RBP3.95□□□□□ -1.78
SRRT-206ENST00000460194 PRR15LQ9BU68 103 aa3.95□□□□□ -1.78
SRRT-206ENST00000460194 LINC01558Q9Y6Z2 57 aa3.95□□□□□ -1.78
SRRT-206ENST00000460194 OBSCNQ5VST9 7968 aa3.94□□□□□ -1.78
SRRT-206ENST00000460194 LCE3CQ5T5A8 94 aa3.93□□□□□ -1.78
SRRT-206ENST00000460194 KRTAP25-1Q3LHN0 102 aa3.92□□□□□ -1.78
SRRT-206ENST00000460194 KRTAP15-1Q3LI76 137 aa3.89□□□□□ -1.79
SRRT-206ENST00000460194 KRTAP9-4Q9BYQ2 154 aa3.88□□□□□ -1.79
SRRT-206ENST00000460194 RPS28P62857 69 aaKnown RBP3.86□□□□□ -1.79
SRRT-206ENST00000460194 KRTAP6-2Q3LI66 62 aa3.84□□□□□ -1.79
SRRT-206ENST00000460194 UQCR11O14957 56 aa3.83□□□□□ -1.8
SRRT-206ENST00000460194 KRTAP9-9Q9BYP9 154 aa3.81□□□□□ -1.8
SRRT-206ENST00000460194 KRTAP23-1A1A580 65 aa3.8□□□□□ -1.8
SRRT-206ENST00000460194 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
SRRT-206ENST00000460194 KRTAP5-1Q6L8H4 278 aa3.76□□□□□ -1.81
SRRT-206ENST00000460194 MIR22HGQ0VDD5 57 aa3.74□□□□□ -1.81
SRRT-206ENST00000460194 Q1T7F1 81 aa3.71□□□□□ -1.82
SRRT-206ENST00000460194 V9GYY9 64 aa3.71□□□□□ -1.82
SRRT-206ENST00000460194 PSPHP1O15172 72 aa3.67□□□□□ -1.82
SRRT-206ENST00000460194 K7ERS5 55 aa3.65□□□□□ -1.83
SRRT-206ENST00000460194 MT3P25713 68 aa3.61□□□□□ -1.83
SRRT-206ENST00000460194 BRK1Q8WUW1 75 aa3.57□□□□□ -1.84
SRRT-206ENST00000460194 A6NED7 52 aa3.55□□□□□ -1.84
SRRT-206ENST00000460194 PRO0628Q9UI54 55 aa3.52□□□□□ -1.85
SRRT-206ENST00000460194 CDC42SE1Q9NRR8 79 aa3.47□□□□□ -1.85
SRRT-206ENST00000460194 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
SRRT-206ENST00000460194 SVIPQ8NHG7 77 aa3.44□□□□□ -1.86
SRRT-206ENST00000460194 ROMO1P60602 79 aa3.42□□□□□ -1.86
SRRT-206ENST00000460194 PMAIP1Q13794 54 aa3.35□□□□□ -1.87
SRRT-206ENST00000460194 KRTAP4-2Q9BYR5 136 aa3.32□□□□□ -1.88
SRRT-206ENST00000460194 KTN1-AS1Q86SY8 53 aa3.26□□□□□ -1.89
SRRT-206ENST00000460194 LCE1CQ5T751 118 aa3.2□□□□□ -1.9
SRRT-206ENST00000460194 LCE1BQ5T7P3 118 aa3.2□□□□□ -1.9
SRRT-206ENST00000460194 PRAC1Q96KF2 57 aa3.15□□□□□ -1.91
SRRT-206ENST00000460194 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
SRRT-206ENST00000460194 H3BS24 57 aa2.99□□□□□ -1.93
SRRT-206ENST00000460194 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
SRRT-206ENST00000460194 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
SRRT-206ENST00000460194 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.9□□□□□ -1.95
SRRT-206ENST00000460194 PHGR1C9JFL3 82 aa2.74□□□□□ -1.97
SRRT-206ENST00000460194 LCE3DQ9BYE3 92 aa2.73□□□□□ -1.97
SRRT-206ENST00000460194 KRTAP21-2Q3LI59 83 aa2.66□□□□□ -1.98
SRRT-206ENST00000460194 LUZP6Q538Z0 58 aa2.57□□□□□ -2
SRRT-206ENST00000460194 NDUFAF8A1L188 74 aa2.56□□□□□ -2
SRRT-206ENST00000460194 LCE3EQ5T5B0 92 aa2.52□□□□□ -2.01
SRRT-206ENST00000460194 KRTAP4-4Q9BYR3 166 aa2.43□□□□□ -2.02
SRRT-206ENST00000460194 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
SRRT-206ENST00000460194 A0A0A0MQY5 61 aa2.37□□□□□ -2.03
SRRT-206ENST00000460194 INE1O15225 51 aa2.11□□□□□ -2.07
SRRT-206ENST00000460194 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
SRRT-206ENST00000460194 PRM1P04553 51 aa1.75□□□□□ -2.13
SRRT-206ENST00000460194 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 64 ms