RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 CHKB-CPT1BH3BT56 60 aa5.17□□□□□ -1.58
UPF3AP2-201ENST00000457924 SCGB1A1P11684 91 aa5.16□□□□□ -1.58
UPF3AP2-201ENST00000457924 KRTAP19-5Q3LI72 72 aa5.15□□□□□ -1.59
UPF3AP2-201ENST00000457924 KRTAP13-4Q3LI77 160 aa5.15□□□□□ -1.59
UPF3AP2-201ENST00000457924 A0A0D9SG42 100 aa5.14□□□□□ -1.59
UPF3AP2-201ENST00000457924 MT1MQ8N339 61 aa5.13□□□□□ -1.59
UPF3AP2-201ENST00000457924 KRTAP5-4Q6L8H1 288 aa5.11□□□□□ -1.59
UPF3AP2-201ENST00000457924 KRTAP5-7Q6L8G8 165 aa5.06□□□□□ -1.6
UPF3AP2-201ENST00000457924 MT1LQ93083 61 aa5.05□□□□□ -1.6
UPF3AP2-201ENST00000457924 KRTAP4-3Q9BYR4 195 aa5.01□□□□□ -1.61
UPF3AP2-201ENST00000457924 LCE3EQ5T5B0 92 aa4.98□□□□□ -1.61
UPF3AP2-201ENST00000457924 SPINT4Q6UDR6 99 aa4.96□□□□□ -1.62
UPF3AP2-201ENST00000457924 A8MU10 97 aa4.94□□□□□ -1.62
UPF3AP2-201ENST00000457924 KRTAP5-1Q6L8H4 278 aa4.92□□□□□ -1.62
UPF3AP2-201ENST00000457924 SMIM20Q8N5G0 67 aa4.9□□□□□ -1.63
UPF3AP2-201ENST00000457924 SPATA8Q6RVD6 105 aa4.88□□□□□ -1.63
UPF3AP2-201ENST00000457924 C10orf95Q9H7T3 257 aa4.88□□□□□ -1.63
UPF3AP2-201ENST00000457924 SPRR5A0A1B0GTR4 108 aa4.87□□□□□ -1.63
UPF3AP2-201ENST00000457924 KRTAP20-2Q3LI61 65 aa4.86□□□□□ -1.63
UPF3AP2-201ENST00000457924 SPANXA2-OT1Q8N9U9 137 aa4.86□□□□□ -1.63
UPF3AP2-201ENST00000457924 SERP1Q9Y6X1 66 aa4.86□□□□□ -1.63
UPF3AP2-201ENST00000457924 KRTAP12-1P59990 96 aa4.85□□□□□ -1.63
UPF3AP2-201ENST00000457924 SNURFQ9Y675 71 aa4.85□□□□□ -1.63
UPF3AP2-201ENST00000457924 LCE3AQ5TA76 89 aa4.84□□□□□ -1.63
UPF3AP2-201ENST00000457924 A0A1B0GU33 70 aa4.79□□□□□ -1.64
UPF3AP2-201ENST00000457924 TNP1P09430 55 aa4.76□□□□□ -1.65
UPF3AP2-201ENST00000457924 COA5Q86WW8 74 aa4.75□□□□□ -1.65
UPF3AP2-201ENST00000457924 KRTAP12-4P60329 112 aa4.74□□□□□ -1.65
UPF3AP2-201ENST00000457924 ANAPC13Q9BS18 74 aa4.74□□□□□ -1.65
UPF3AP2-201ENST00000457924 KRTAP5-5Q701N2 237 aaPredicted RBP4.73□□□□□ -1.65
UPF3AP2-201ENST00000457924 KRTAP4-4Q9BYR3 166 aa4.69□□□□□ -1.66
UPF3AP2-201ENST00000457924 SERP2Q8N6R1 65 aa4.68□□□□□ -1.66
UPF3AP2-201ENST00000457924 SMIM26A0A096LP01 95 aa4.67□□□□□ -1.66
UPF3AP2-201ENST00000457924 COX7CP15954 63 aa4.66□□□□□ -1.66
UPF3AP2-201ENST00000457924 KRTAP12-3P60328 96 aa4.66□□□□□ -1.66
UPF3AP2-201ENST00000457924 PRO0628Q9UI54 55 aa4.66□□□□□ -1.66
UPF3AP2-201ENST00000457924 SYNE1Q8NF91 8797 aaKnown RBP4.62□□□□□ -1.67
UPF3AP2-201ENST00000457924 CCDC179H3BU77 68 aa4.56□□□□□ -1.68
UPF3AP2-201ENST00000457924 PSPHP1O15172 72 aa4.56□□□□□ -1.68
UPF3AP2-201ENST00000457924 A0A1B0GU69 56 aa4.54□□□□□ -1.68
UPF3AP2-201ENST00000457924 PMAIP1Q13794 54 aa4.53□□□□□ -1.68
UPF3AP2-201ENST00000457924 TMEM258P61165 79 aa4.51□□□□□ -1.69
UPF3AP2-201ENST00000457924 ATP5EP56381 51 aaPredicted RBP4.49□□□□□ -1.69
UPF3AP2-201ENST00000457924 H7BZZ5 65 aa4.47□□□□□ -1.69
UPF3AP2-201ENST00000457924 AHNAKQ09666 5890 aaKnown RBP4.41□□□□□ -1.7
UPF3AP2-201ENST00000457924 KRTAP5-2Q701N4 177 aa4.4□□□□□ -1.71
UPF3AP2-201ENST00000457924 MUC5ACP98088 5654 aa4.39□□□□□ -1.71
UPF3AP2-201ENST00000457924 KRTAP5-8O75690 187 aa4.38□□□□□ -1.71
UPF3AP2-201ENST00000457924 RPS28P62857 69 aaKnown RBP4.38□□□□□ -1.71
UPF3AP2-201ENST00000457924 MUC5BQ9HC84 5762 aaPredicted RBP4.33□□□□□ -1.72
UPF3AP2-201ENST00000457924 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
UPF3AP2-201ENST00000457924 PRR15LQ9BU68 103 aa4.3□□□□□ -1.72
UPF3AP2-201ENST00000457924 MT1AP04731 61 aa4.29□□□□□ -1.72
UPF3AP2-201ENST00000457924 KRTAP6-1Q3LI64 71 aa4.29□□□□□ -1.72
UPF3AP2-201ENST00000457924 KRTAP25-1Q3LHN0 102 aa4.28□□□□□ -1.72
UPF3AP2-201ENST00000457924 KRTAP6-2Q3LI66 62 aa4.18□□□□□ -1.74
UPF3AP2-201ENST00000457924 LUZP6Q538Z0 58 aa4.17□□□□□ -1.74
UPF3AP2-201ENST00000457924 Q1T7F1 81 aa4.15□□□□□ -1.75
UPF3AP2-201ENST00000457924 UQCR11O14957 56 aa4.13□□□□□ -1.75
UPF3AP2-201ENST00000457924 LINC01558Q9Y6Z2 57 aa4.13□□□□□ -1.75
UPF3AP2-201ENST00000457924 K7ERS5 55 aa4.12□□□□□ -1.75
UPF3AP2-201ENST00000457924 KTN1-AS1Q86SY8 53 aa4.12□□□□□ -1.75
UPF3AP2-201ENST00000457924 LCE3DQ9BYE3 92 aa4.07□□□□□ -1.76
UPF3AP2-201ENST00000457924 A6NED7 52 aa4.06□□□□□ -1.76
UPF3AP2-201ENST00000457924 MIR22HGQ0VDD5 57 aa4□□□□□ -1.77
UPF3AP2-201ENST00000457924 BRK1Q8WUW1 75 aa3.98□□□□□ -1.77
UPF3AP2-201ENST00000457924 LCE1CQ5T751 118 aa3.9□□□□□ -1.79
UPF3AP2-201ENST00000457924 LCE1BQ5T7P3 118 aa3.9□□□□□ -1.79
UPF3AP2-201ENST00000457924 CDC42SE1Q9NRR8 79 aa3.9□□□□□ -1.79
UPF3AP2-201ENST00000457924 ROMO1P60602 79 aa3.64□□□□□ -1.83
UPF3AP2-201ENST00000457924 MUC19Q7Z5P9 8384 aa3.13□□□□□ -1.91
UPF3AP2-201ENST00000457924 PHGR1C9JFL3 82 aa3.07□□□□□ -1.92
UPF3AP2-201ENST00000457924 INE1O15225 51 aa3.04□□□□□ -1.92
UPF3AP2-201ENST00000457924 KRTAP21-2Q3LI59 83 aa2.83□□□□□ -1.96
UPF3AP2-201ENST00000457924 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
UPF3AP2-201ENST00000457924 MUC16Q8WXI7 14507 aa1.88□□□□□ -2.11
UPF3AP2-201ENST00000457924 PRM1P04553 51 aa1.86□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 10.7 ms