RNA–Protein interactions for RNA: ENST00000456492.1

NME1-204, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 510 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-204ENST00000456492 KRTAP19-7Q3SYF9 63 aa1.79□□□□□ -2.12
NME1-204ENST00000456492 MT4P47944 62 aa1.78□□□□□ -2.12
NME1-204ENST00000456492 A0A0D9SG42 100 aa1.76□□□□□ -2.13
NME1-204ENST00000456492 LOC105371267A0A1B0GV96 52 aa1.75□□□□□ -2.13
NME1-204ENST00000456492 NDUFAF8A1L188 74 aa1.75□□□□□ -2.13
NME1-204ENST00000456492 J3QR89 54 aa1.75□□□□□ -2.13
NME1-204ENST00000456492 SEC61GP60059 68 aa1.75□□□□□ -2.13
NME1-204ENST00000456492 SMIM20Q8N5G0 67 aa1.75□□□□□ -2.13
NME1-204ENST00000456492 PRAC1Q96KF2 57 aa1.74□□□□□ -2.13
NME1-204ENST00000456492 MT1MQ8N339 61 aa1.73□□□□□ -2.13
NME1-204ENST00000456492 SERP1Q9Y6X1 66 aa1.73□□□□□ -2.13
NME1-204ENST00000456492 KRTAP19-5Q3LI72 72 aa1.72□□□□□ -2.13
NME1-204ENST00000456492 SPINT4Q6UDR6 99 aa1.7□□□□□ -2.14
NME1-204ENST00000456492 SPANXA2-OT1Q8N9U9 137 aa1.7□□□□□ -2.14
NME1-204ENST00000456492 KRTAP13-4Q3LI77 160 aa1.69□□□□□ -2.14
NME1-204ENST00000456492 MT1LQ93083 61 aa1.69□□□□□ -2.14
NME1-204ENST00000456492 KRTAP4-3Q9BYR4 195 aa1.69□□□□□ -2.14
NME1-204ENST00000456492 OBSCNQ5VST9 7968 aa1.69□□□□□ -2.14
NME1-204ENST00000456492 PCP4L1A6NKN8 68 aa1.68□□□□□ -2.14
NME1-204ENST00000456492 A0A1B0GU33 70 aa1.67□□□□□ -2.14
NME1-204ENST00000456492 TNP1P09430 55 aa1.67□□□□□ -2.14
NME1-204ENST00000456492 KRTAP12-4P60329 112 aa1.67□□□□□ -2.14
NME1-204ENST00000456492 C10orf95Q9H7T3 257 aa1.67□□□□□ -2.14
NME1-204ENST00000456492 SMIM26A0A096LP01 95 aa1.66□□□□□ -2.14
NME1-204ENST00000456492 LCE3AQ5TA76 89 aa1.66□□□□□ -2.14
NME1-204ENST00000456492 LCE3EQ5T5B0 92 aa1.65□□□□□ -2.15
NME1-204ENST00000456492 A8MU10 97 aa1.64□□□□□ -2.15
NME1-204ENST00000456492 KRTAP12-1P59990 96 aa1.64□□□□□ -2.15
NME1-204ENST00000456492 KRTAP20-2Q3LI61 65 aa1.64□□□□□ -2.15
NME1-204ENST00000456492 SPATA8Q6RVD6 105 aa1.63□□□□□ -2.15
NME1-204ENST00000456492 SNURFQ9Y675 71 aa1.63□□□□□ -2.15
NME1-204ENST00000456492 KRTAP5-2Q701N4 177 aa1.62□□□□□ -2.15
NME1-204ENST00000456492 COA5Q86WW8 74 aa1.62□□□□□ -2.15
NME1-204ENST00000456492 SERP2Q8N6R1 65 aa1.6□□□□□ -2.15
NME1-204ENST00000456492 A0A1B0GU69 56 aa1.59□□□□□ -2.15
NME1-204ENST00000456492 KRTAP12-3P60328 96 aa1.59□□□□□ -2.15
NME1-204ENST00000456492 A0A1B0GV90 55 aa1.58□□□□□ -2.16
NME1-204ENST00000456492 KRTAP5-5Q701N2 237 aaPredicted RBP1.58□□□□□ -2.16
NME1-204ENST00000456492 K7ERU9 68 aa1.57□□□□□ -2.16
NME1-204ENST00000456492 PRR15LQ9BU68 103 aa1.55□□□□□ -2.16
NME1-204ENST00000456492 KRTAP5-8O75690 187 aa1.53□□□□□ -2.16
NME1-204ENST00000456492 SYNE1Q8NF91 8797 aaKnown RBP1.51□□□□□ -2.17
NME1-204ENST00000456492 KRTAP25-1Q3LHN0 102 aa1.51□□□□□ -2.17
NME1-204ENST00000456492 COX7CP15954 63 aa1.49□□□□□ -2.17
NME1-204ENST00000456492 H7BZZ5 65 aa1.48□□□□□ -2.17
NME1-204ENST00000456492 K7ERS5 55 aa1.48□□□□□ -2.17
NME1-204ENST00000456492 LCE1CQ5T751 118 aa1.48□□□□□ -2.17
NME1-204ENST00000456492 LCE1BQ5T7P3 118 aa1.48□□□□□ -2.17
NME1-204ENST00000456492 MT1AP04731 61 aa1.47□□□□□ -2.17
NME1-204ENST00000456492 UQCR11O14957 56 aa1.46□□□□□ -2.18
NME1-204ENST00000456492 ATP5EP56381 51 aaPredicted RBP1.43□□□□□ -2.18
NME1-204ENST00000456492 KRTAP6-1Q3LI64 71 aa1.42□□□□□ -2.18
NME1-204ENST00000456492 LINC01558Q9Y6Z2 57 aa1.42□□□□□ -2.18
NME1-204ENST00000456492 MIR22HGQ0VDD5 57 aa1.39□□□□□ -2.19
NME1-204ENST00000456492 KRTAP6-2Q3LI66 62 aa1.39□□□□□ -2.19
NME1-204ENST00000456492 RPS28P62857 69 aaKnown RBP1.38□□□□□ -2.19
NME1-204ENST00000456492 ANAPC13Q9BS18 74 aa1.36□□□□□ -2.19
NME1-204ENST00000456492 CDC42SE1Q9NRR8 79 aa1.33□□□□□ -2.2
NME1-204ENST00000456492 V9GYY9 64 aa1.33□□□□□ -2.2
NME1-204ENST00000456492 PHGR1C9JFL3 82 aa1.3□□□□□ -2.2
NME1-204ENST00000456492 TMEM258P61165 79 aa1.3□□□□□ -2.2
NME1-204ENST00000456492 Q1T7F1 81 aa1.29□□□□□ -2.2
NME1-204ENST00000456492 LCE3DQ9BYE3 92 aa1.29□□□□□ -2.2
NME1-204ENST00000456492 CCDC179H3BU77 68 aa1.27□□□□□ -2.21
NME1-204ENST00000456492 ROMO1P60602 79 aa1.27□□□□□ -2.21
NME1-204ENST00000456492 PSPHP1O15172 72 aa1.24□□□□□ -2.21
NME1-204ENST00000456492 A6NED7 52 aa1.23□□□□□ -2.21
NME1-204ENST00000456492 MUC19Q7Z5P9 8384 aa1.19□□□□□ -2.22
NME1-204ENST00000456492 LUZP6Q538Z0 58 aa1.1□□□□□ -2.23
NME1-204ENST00000456492 PRO0628Q9UI54 55 aa1.07□□□□□ -2.24
NME1-204ENST00000456492 KRTAP21-2Q3LI59 83 aa1.04□□□□□ -2.24
NME1-204ENST00000456492 KRTAP21-1Q3LI58 79 aa1□□□□□ -2.25
NME1-204ENST00000456492 BRK1Q8WUW1 75 aa0.96□□□□□ -2.26
NME1-204ENST00000456492 PMAIP1Q13794 54 aa0.84□□□□□ -2.27
NME1-204ENST00000456492 KTN1-AS1Q86SY8 53 aa0.73□□□□□ -2.29
NME1-204ENST00000456492 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
NME1-204ENST00000456492 PRM1P04553 51 aa0.61□□□□□ -2.31
NME1-204ENST00000456492 INE1O15225 51 aa0.53□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 71.5 ms