RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-223	ENST00000449864	KRTAP4-9	Q9BYQ8	210 aa		5.53	□□□□□ -1.52
HDLBP-223	ENST00000449864		K7ERS5	55 aa		5.51	□□□□□ -1.53
HDLBP-223	ENST00000449864		V9GYY9	64 aa		5.51	□□□□□ -1.53
HDLBP-223	ENST00000449864	PSPHP1	O15172	72 aa		5.49	□□□□□ -1.53
HDLBP-223	ENST00000449864	KRTAP12-3	P60328	96 aa		5.48	□□□□□ -1.53
HDLBP-223	ENST00000449864	KRTAP4-3	Q9BYR4	195 aa		5.47	□□□□□ -1.53
HDLBP-223	ENST00000449864	KRTAP25-1	Q3LHN0	102 aa		5.45	□□□□□ -1.54
HDLBP-223	ENST00000449864		Q1T7F1	81 aa		5.43	□□□□□ -1.54
HDLBP-223	ENST00000449864	LCE1D	Q5T752	114 aa		5.41	□□□□□ -1.54
HDLBP-223	ENST00000449864	LCE4A	Q5TA78	99 aa		5.41	□□□□□ -1.54
HDLBP-223	ENST00000449864	MT4	P47944	62 aa		5.38	□□□□□ -1.55
HDLBP-223	ENST00000449864	GPR98	Q8WXG9	6306 aa		5.38	□□□□□ -1.55
HDLBP-223	ENST00000449864	KRTAP4-7	Q9BYR0	210 aa		5.34	□□□□□ -1.55
HDLBP-223	ENST00000449864		A6NED7	52 aa		5.33	□□□□□ -1.56
HDLBP-223	ENST00000449864	KRTAP5-4	Q6L8H1	288 aa		5.29	□□□□□ -1.56
HDLBP-223	ENST00000449864	HMCN1	Q96RW7	5635 aa		5.27	□□□□□ -1.57
HDLBP-223	ENST00000449864	KRTAP23-1	A1A580	65 aa		5.2	□□□□□ -1.58
HDLBP-223	ENST00000449864	KRTAP4-6	Q9BYQ5	205 aa		5.19	□□□□□ -1.58
HDLBP-223	ENST00000449864	CDC42SE1	Q9NRR8	79 aa		5.19	□□□□□ -1.58
HDLBP-223	ENST00000449864	RPS28	P62857	69 aa	Known RBP	5.14	□□□□□ -1.59
HDLBP-223	ENST00000449864	KRTAP19-4	Q3LI73	84 aa		5.14	□□□□□ -1.59
HDLBP-223	ENST00000449864	KRTAP15-1	Q3LI76	137 aa		5.13	□□□□□ -1.59
HDLBP-223	ENST00000449864	PCP4	P48539	62 aa		5.11	□□□□□ -1.59
HDLBP-223	ENST00000449864	ROMO1	P60602	79 aa		5.1	□□□□□ -1.59
HDLBP-223	ENST00000449864	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.1	□□□□□ -1.59
HDLBP-223	ENST00000449864	AHNAK2	Q8IVF2	5795 aa		5.08	□□□□□ -1.6
HDLBP-223	ENST00000449864	LOC100996750	A0A140TA64	210 aa		5.07	□□□□□ -1.6
HDLBP-223	ENST00000449864	LCE3C	Q5T5A8	94 aa		5.04	□□□□□ -1.6
HDLBP-223	ENST00000449864	KRTAP12-4	P60329	112 aa		5.01	□□□□□ -1.61
HDLBP-223	ENST00000449864	KRTAP20-2	Q3LI61	65 aa		5.01	□□□□□ -1.61
HDLBP-223	ENST00000449864	SPRR5	A0A1B0GTR4	108 aa		4.99	□□□□□ -1.61
HDLBP-223	ENST00000449864	KRTAP5-10	Q6L8G5	202 aa		4.98	□□□□□ -1.61
HDLBP-223	ENST00000449864	KRTAP5-3	Q6L8H2	238 aa		4.89	□□□□□ -1.63
HDLBP-223	ENST00000449864	MT1A	P04731	61 aa		4.8	□□□□□ -1.64
HDLBP-223	ENST00000449864	SYNE1	Q8NF91	8797 aa	Known RBP	4.79	□□□□□ -1.64
HDLBP-223	ENST00000449864	KRTAP5-7	Q6L8G8	165 aa		4.79	□□□□□ -1.64
HDLBP-223	ENST00000449864	KRTAP6-1	Q3LI64	71 aa		4.75	□□□□□ -1.65
HDLBP-223	ENST00000449864	KRTAP9-6	A8MVA2	160 aa		4.73	□□□□□ -1.65
HDLBP-223	ENST00000449864	KRTAP5-2	Q701N4	177 aa		4.65	□□□□□ -1.67
HDLBP-223	ENST00000449864	KRTAP9-4	Q9BYQ2	154 aa		4.62	□□□□□ -1.67
HDLBP-223	ENST00000449864	BRK1	Q8WUW1	75 aa		4.58	□□□□□ -1.68
HDLBP-223	ENST00000449864	KRTAP4-11	Q9BYQ6	195 aa		4.57	□□□□□ -1.68
HDLBP-223	ENST00000449864	KRTAP6-2	Q3LI66	62 aa		4.55	□□□□□ -1.68
HDLBP-223	ENST00000449864	KRTAP5-8	O75690	187 aa		4.4	□□□□□ -1.71
HDLBP-223	ENST00000449864	MT3	P25713	68 aa		4.39	□□□□□ -1.71
HDLBP-223	ENST00000449864	OBSCN	Q5VST9	7968 aa		4.38	□□□□□ -1.71
HDLBP-223	ENST00000449864	PMAIP1	Q13794	54 aa		4.28	□□□□□ -1.72
HDLBP-223	ENST00000449864	KRTAP9-9	Q9BYP9	154 aa		4.2	□□□□□ -1.74
HDLBP-223	ENST00000449864	MUC5AC	P98088	5654 aa		4.17	□□□□□ -1.74
HDLBP-223	ENST00000449864	AHNAK	Q09666	5890 aa	Known RBP	4.16	□□□□□ -1.74
HDLBP-223	ENST00000449864	KRTAP5-1	Q6L8H4	278 aa		4.15	□□□□□ -1.75
HDLBP-223	ENST00000449864	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.15	□□□□□ -1.75
HDLBP-223	ENST00000449864	PRAC1	Q96KF2	57 aa		4.13	□□□□□ -1.75
HDLBP-223	ENST00000449864	LCE1E	Q5T753	118 aa		4	□□□□□ -1.77
HDLBP-223	ENST00000449864	PRO0628	Q9UI54	55 aa		3.94	□□□□□ -1.78
HDLBP-223	ENST00000449864		H3BS24	57 aa		3.92	□□□□□ -1.78
HDLBP-223	ENST00000449864	LCE1B	Q5T7P3	118 aa		3.81	□□□□□ -1.8
HDLBP-223	ENST00000449864	KTN1-AS1	Q86SY8	53 aa		3.8	□□□□□ -1.8
HDLBP-223	ENST00000449864	KRTAP4-2	Q9BYR5	136 aa		3.77	□□□□□ -1.81
HDLBP-223	ENST00000449864	SVIP	Q8NHG7	77 aa		3.72	□□□□□ -1.81
HDLBP-223	ENST00000449864	LCE1C	Q5T751	118 aa		3.71	□□□□□ -1.82
HDLBP-223	ENST00000449864	LCE3D	Q9BYE3	92 aa		3.65	□□□□□ -1.83
HDLBP-223	ENST00000449864	LUZP6	Q538Z0	58 aa		3.53	□□□□□ -1.84
HDLBP-223	ENST00000449864	LCE3E	Q5T5B0	92 aa		3.44	□□□□□ -1.86
HDLBP-223	ENST00000449864	KRTAP4-12	Q9BQ66	201 aa		3.43	□□□□□ -1.86
HDLBP-223	ENST00000449864	KRTAP5-11	Q6L8G4	156 aa		3.37	□□□□□ -1.87
HDLBP-223	ENST00000449864	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.37	□□□□□ -1.87
HDLBP-223	ENST00000449864	LCE1F	Q5T754	118 aa		3.26	□□□□□ -1.89
HDLBP-223	ENST00000449864	KRTAP21-2	Q3LI59	83 aa		3.11	□□□□□ -1.91
HDLBP-223	ENST00000449864	PHGR1	C9JFL3	82 aa		2.93	□□□□□ -1.94
HDLBP-223	ENST00000449864		A0A0A0MQY5	61 aa		2.89	□□□□□ -1.95
HDLBP-223	ENST00000449864	KRTAP4-4	Q9BYR3	166 aa		2.88	□□□□□ -1.95
HDLBP-223	ENST00000449864	NDUFAF8	A1L188	74 aa		2.79	□□□□□ -1.96
HDLBP-223	ENST00000449864	MUC19	Q7Z5P9	8384 aa		2.67	□□□□□ -1.98
HDLBP-223	ENST00000449864	PRM1	P04553	51 aa		2.61	□□□□□ -1.99
HDLBP-223	ENST00000449864	INE1	O15225	51 aa		2.22	□□□□□ -2.05
HDLBP-223	ENST00000449864	KRTAP21-1	Q3LI58	79 aa		2.22	□□□□□ -2.05
HDLBP-223	ENST00000449864	MUC16	Q8WXI7	14507 aa		1.8	□□□□□ -2.12

Retrieved 78 of 20,778 RNA–protein pairs in 102.6 ms