RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 Q1T7F1 81 aa9.09□□□□□ -0.95
HTATSF1-203ENST00000448450 LCE1DQ5T752 114 aa9.03□□□□□ -0.96
HTATSF1-203ENST00000448450 HMCN1Q96RW7 5635 aa8.97□□□□□ -0.97
HTATSF1-203ENST00000448450 MT1GP13640 62 aa8.96□□□□□ -0.98
HTATSF1-203ENST00000448450 K7ERS5 55 aa8.94□□□□□ -0.98
HTATSF1-203ENST00000448450 MT1LQ93083 61 aa8.91□□□□□ -0.98
HTATSF1-203ENST00000448450 PCP4P48539 62 aa8.9□□□□□ -0.98
HTATSF1-203ENST00000448450 PP632Q6XCG6 107 aa8.88□□□□□ -0.99
HTATSF1-203ENST00000448450 MT4P47944 62 aa8.86□□□□□ -0.99
HTATSF1-203ENST00000448450 LCE4AQ5TA78 99 aa8.86□□□□□ -0.99
HTATSF1-203ENST00000448450 MT1MQ8N339 61 aa8.83□□□□□ -1
HTATSF1-203ENST00000448450 A6NED7 52 aa8.82□□□□□ -1
HTATSF1-203ENST00000448450 AHNAK2Q8IVF2 5795 aa8.81□□□□□ -1
HTATSF1-203ENST00000448450 KRTAP25-1Q3LHN0 102 aa8.78□□□□□ -1
HTATSF1-203ENST00000448450 RPS28P62857 69 aaKnown RBP8.77□□□□□ -1.01
HTATSF1-203ENST00000448450 KRTAP12-3P60328 96 aa8.76□□□□□ -1.01
HTATSF1-203ENST00000448450 KRTAP4-3Q9BYR4 195 aa8.67□□□□□ -1.02
HTATSF1-203ENST00000448450 KRTAP5-10Q6L8G5 202 aa8.65□□□□□ -1.02
HTATSF1-203ENST00000448450 KRTAP5-4Q6L8H1 288 aa8.58□□□□□ -1.04
HTATSF1-203ENST00000448450 KRTAP4-7Q9BYR0 210 aa8.55□□□□□ -1.04
HTATSF1-203ENST00000448450 KRTAP4-6Q9BYQ5 205 aa8.51□□□□□ -1.05
HTATSF1-203ENST00000448450 CDC42SE1Q9NRR8 79 aa8.49□□□□□ -1.05
HTATSF1-203ENST00000448450 KRTAP23-1A1A580 65 aa8.42□□□□□ -1.06
HTATSF1-203ENST00000448450 KRTAP5-7Q6L8G8 165 aa8.4□□□□□ -1.06
HTATSF1-203ENST00000448450 ROMO1P60602 79 aa8.37□□□□□ -1.07
HTATSF1-203ENST00000448450 KRTAP5-3Q6L8H2 238 aa8.33□□□□□ -1.08
HTATSF1-203ENST00000448450 KRTAP15-1Q3LI76 137 aa8.26□□□□□ -1.09
HTATSF1-203ENST00000448450 KRTAP19-4Q3LI73 84 aa8.18□□□□□ -1.1
HTATSF1-203ENST00000448450 KRTAP20-2Q3LI61 65 aa8.15□□□□□ -1.1
HTATSF1-203ENST00000448450 LOC100996750A0A140TA64 210 aa8.09□□□□□ -1.11
HTATSF1-203ENST00000448450 LCE3CQ5T5A8 94 aa8.09□□□□□ -1.11
HTATSF1-203ENST00000448450 SPRR5A0A1B0GTR4 108 aa8.05□□□□□ -1.12
HTATSF1-203ENST00000448450 KRTAP5-5Q701N2 237 aaPredicted RBP8.04□□□□□ -1.12
HTATSF1-203ENST00000448450 KRTAP12-4P60329 112 aa7.97□□□□□ -1.13
HTATSF1-203ENST00000448450 BRK1Q8WUW1 75 aa7.79□□□□□ -1.16
HTATSF1-203ENST00000448450 SYNE1Q8NF91 8797 aaKnown RBP7.75□□□□□ -1.17
HTATSF1-203ENST00000448450 KRTAP9-6A8MVA2 160 aa7.64□□□□□ -1.19
HTATSF1-203ENST00000448450 MT1AP04731 61 aa7.58□□□□□ -1.2
HTATSF1-203ENST00000448450 KRTAP4-11Q9BYQ6 195 aa7.58□□□□□ -1.2
HTATSF1-203ENST00000448450 KRTAP6-1Q3LI64 71 aa7.55□□□□□ -1.2
HTATSF1-203ENST00000448450 AHNAKQ09666 5890 aaKnown RBP7.45□□□□□ -1.22
HTATSF1-203ENST00000448450 MUC5ACP98088 5654 aa7.41□□□□□ -1.22
HTATSF1-203ENST00000448450 KRTAP5-2Q701N4 177 aa7.41□□□□□ -1.22
HTATSF1-203ENST00000448450 MUC5BQ9HC84 5762 aaPredicted RBP7.34□□□□□ -1.23
HTATSF1-203ENST00000448450 PMAIP1Q13794 54 aa7.33□□□□□ -1.24
HTATSF1-203ENST00000448450 KRTAP5-8O75690 187 aa7.32□□□□□ -1.24
HTATSF1-203ENST00000448450 KRTAP9-4Q9BYQ2 154 aa7.32□□□□□ -1.24
HTATSF1-203ENST00000448450 OBSCNQ5VST9 7968 aa7.22□□□□□ -1.25
HTATSF1-203ENST00000448450 H3BS24 57 aa7.22□□□□□ -1.25
HTATSF1-203ENST00000448450 KRTAP6-2Q3LI66 62 aa7.18□□□□□ -1.26
HTATSF1-203ENST00000448450 KRTAP9-9Q9BYP9 154 aa7.08□□□□□ -1.28
HTATSF1-203ENST00000448450 PRAC1Q96KF2 57 aa7.06□□□□□ -1.28
HTATSF1-203ENST00000448450 PRO0628Q9UI54 55 aa6.99□□□□□ -1.29
HTATSF1-203ENST00000448450 MT3P25713 68 aa6.93□□□□□ -1.3
HTATSF1-203ENST00000448450 KRTAP5-1Q6L8H4 278 aa6.75□□□□□ -1.33
HTATSF1-203ENST00000448450 SVIPQ8NHG7 77 aa6.69□□□□□ -1.34
HTATSF1-203ENST00000448450 KTN1-AS1Q86SY8 53 aa6.6□□□□□ -1.35
HTATSF1-203ENST00000448450 LCE1EQ5T753 118 aa6.28□□□□□ -1.4
HTATSF1-203ENST00000448450 LCE1BQ5T7P3 118 aa5.98□□□□□ -1.45
HTATSF1-203ENST00000448450 KRTAP4-2Q9BYR5 136 aa5.97□□□□□ -1.45
HTATSF1-203ENST00000448450 LUZP6Q538Z0 58 aa5.89□□□□□ -1.47
HTATSF1-203ENST00000448450 LCE3DQ9BYE3 92 aa5.87□□□□□ -1.47
HTATSF1-203ENST00000448450 LCE1CQ5T751 118 aa5.83□□□□□ -1.48
HTATSF1-203ENST00000448450 KRTAP4-12Q9BQ66 201 aa5.65□□□□□ -1.5
HTATSF1-203ENST00000448450 LCE3EQ5T5B0 92 aa5.56□□□□□ -1.52
HTATSF1-203ENST00000448450 A0A0A0MQY5 61 aa5.52□□□□□ -1.53
HTATSF1-203ENST00000448450 KRTAP5-11Q6L8G4 156 aa5.34□□□□□ -1.55
HTATSF1-203ENST00000448450 LCE1FQ5T754 118 aa5.32□□□□□ -1.56
HTATSF1-203ENST00000448450 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.3□□□□□ -1.56
HTATSF1-203ENST00000448450 PHGR1C9JFL3 82 aa5.09□□□□□ -1.59
HTATSF1-203ENST00000448450 NDUFAF8A1L188 74 aa4.97□□□□□ -1.61
HTATSF1-203ENST00000448450 KRTAP21-2Q3LI59 83 aa4.95□□□□□ -1.62
HTATSF1-203ENST00000448450 KRTAP4-4Q9BYR3 166 aa4.58□□□□□ -1.68
HTATSF1-203ENST00000448450 MUC19Q7Z5P9 8384 aa4.47□□□□□ -1.69
HTATSF1-203ENST00000448450 PRM1P04553 51 aa4.32□□□□□ -1.72
HTATSF1-203ENST00000448450 INE1O15225 51 aa4.06□□□□□ -1.76
HTATSF1-203ENST00000448450 KRTAP21-1Q3LI58 79 aa3.88□□□□□ -1.79
HTATSF1-203ENST00000448450 MUC16Q8WXI7 14507 aa3.03□□□□□ -1.92
Retrieved 78 of 20,778 RNA–protein pairs in 12.4 ms