RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 KRTAP4-6Q9BYQ5 205 aa8.6□□□□□ -1.03
PMS1-214ENST00000446877 MT1LQ93083 61 aa8.59□□□□□ -1.03
PMS1-214ENST00000446877 SPINT4Q6UDR6 99 aa8.55□□□□□ -1.04
PMS1-214ENST00000446877 SMIM26A0A096LP01 95 aa8.52□□□□□ -1.05
PMS1-214ENST00000446877 KRTAP4-3Q9BYR4 195 aa8.52□□□□□ -1.05
PMS1-214ENST00000446877 V9GYY9 64 aa8.49□□□□□ -1.05
PMS1-214ENST00000446877 KRTAP5-7Q6L8G8 165 aa8.47□□□□□ -1.05
PMS1-214ENST00000446877 RPS28P62857 69 aaKnown RBP8.45□□□□□ -1.06
PMS1-214ENST00000446877 Q1T7F1 81 aa8.44□□□□□ -1.06
PMS1-214ENST00000446877 KRTAP12-1P59990 96 aa8.42□□□□□ -1.06
PMS1-214ENST00000446877 UQCR11O14957 56 aa8.4□□□□□ -1.06
PMS1-214ENST00000446877 KRTAP5-3Q6L8H2 238 aa8.4□□□□□ -1.06
PMS1-214ENST00000446877 A8MU10 97 aa8.39□□□□□ -1.07
PMS1-214ENST00000446877 C10orf95Q9H7T3 257 aa8.35□□□□□ -1.07
PMS1-214ENST00000446877 PSPHP1O15172 72 aa8.31□□□□□ -1.08
PMS1-214ENST00000446877 LCE3AQ5TA76 89 aa8.29□□□□□ -1.08
PMS1-214ENST00000446877 MIR22HGQ0VDD5 57 aa8.24□□□□□ -1.09
PMS1-214ENST00000446877 TNP1P09430 55 aa8.2□□□□□ -1.1
PMS1-214ENST00000446877 KRTAP20-2Q3LI61 65 aa8.2□□□□□ -1.1
PMS1-214ENST00000446877 SPRR5A0A1B0GTR4 108 aa8.17□□□□□ -1.1
PMS1-214ENST00000446877 KRTAP4-7Q9BYR0 210 aa8.14□□□□□ -1.11
PMS1-214ENST00000446877 A6NED7 52 aa8.07□□□□□ -1.12
PMS1-214ENST00000446877 KRTAP12-4P60329 112 aa8.05□□□□□ -1.12
PMS1-214ENST00000446877 K7ERS5 55 aa8.01□□□□□ -1.13
PMS1-214ENST00000446877 KRTAP5-5Q701N2 237 aaPredicted RBP8.01□□□□□ -1.13
PMS1-214ENST00000446877 KRTAP12-3P60328 96 aa7.99□□□□□ -1.13
PMS1-214ENST00000446877 SYNE1Q8NF91 8797 aaKnown RBP7.87□□□□□ -1.15
PMS1-214ENST00000446877 CDC42SE1Q9NRR8 79 aa7.83□□□□□ -1.16
PMS1-214ENST00000446877 LOC100996750A0A140TA64 210 aa7.75□□□□□ -1.17
PMS1-214ENST00000446877 KRTAP25-1Q3LHN0 102 aa7.7□□□□□ -1.18
PMS1-214ENST00000446877 KRTAP4-11Q9BYQ6 195 aa7.65□□□□□ -1.18
PMS1-214ENST00000446877 AHNAKQ09666 5890 aaKnown RBP7.6□□□□□ -1.19
PMS1-214ENST00000446877 ROMO1P60602 79 aa7.54□□□□□ -1.2
PMS1-214ENST00000446877 KRTAP19-4Q3LI73 84 aa7.52□□□□□ -1.21
PMS1-214ENST00000446877 MUC5BQ9HC84 5762 aaPredicted RBP7.48□□□□□ -1.21
PMS1-214ENST00000446877 KRTAP23-1A1A580 65 aa7.48□□□□□ -1.21
PMS1-214ENST00000446877 MUC5ACP98088 5654 aa7.47□□□□□ -1.21
PMS1-214ENST00000446877 KRTAP5-2Q701N4 177 aa7.44□□□□□ -1.22
PMS1-214ENST00000446877 BRK1Q8WUW1 75 aa7.43□□□□□ -1.22
PMS1-214ENST00000446877 KRTAP5-8O75690 187 aa7.37□□□□□ -1.23
PMS1-214ENST00000446877 MT1AP04731 61 aa7.31□□□□□ -1.24
PMS1-214ENST00000446877 KRTAP6-1Q3LI64 71 aa7.29□□□□□ -1.24
PMS1-214ENST00000446877 LCE3CQ5T5A8 94 aa7.29□□□□□ -1.24
PMS1-214ENST00000446877 KRTAP15-1Q3LI76 137 aa7.27□□□□□ -1.25
PMS1-214ENST00000446877 OBSCNQ5VST9 7968 aa7.2□□□□□ -1.26
PMS1-214ENST00000446877 KRTAP9-9Q9BYP9 154 aa7.17□□□□□ -1.26
PMS1-214ENST00000446877 KRTAP9-4Q9BYQ2 154 aa7.14□□□□□ -1.27
PMS1-214ENST00000446877 KRTAP6-2Q3LI66 62 aa7.11□□□□□ -1.27
PMS1-214ENST00000446877 PMAIP1Q13794 54 aa7.04□□□□□ -1.28
PMS1-214ENST00000446877 PRO0628Q9UI54 55 aa6.91□□□□□ -1.3
PMS1-214ENST00000446877 KRTAP9-6A8MVA2 160 aa6.84□□□□□ -1.31
PMS1-214ENST00000446877 KRTAP5-1Q6L8H4 278 aa6.79□□□□□ -1.32
PMS1-214ENST00000446877 MT3P25713 68 aa6.75□□□□□ -1.33
PMS1-214ENST00000446877 PRAC1Q96KF2 57 aa6.62□□□□□ -1.35
PMS1-214ENST00000446877 KTN1-AS1Q86SY8 53 aa6.49□□□□□ -1.37
PMS1-214ENST00000446877 LCE1EQ5T753 118 aa6.32□□□□□ -1.4
PMS1-214ENST00000446877 SVIPQ8NHG7 77 aa6.12□□□□□ -1.43
PMS1-214ENST00000446877 LCE1BQ5T7P3 118 aa6.04□□□□□ -1.44
PMS1-214ENST00000446877 KRTAP4-2Q9BYR5 136 aa5.99□□□□□ -1.45
PMS1-214ENST00000446877 LCE1CQ5T751 118 aa5.86□□□□□ -1.47
PMS1-214ENST00000446877 KRTAP4-12Q9BQ66 201 aa5.69□□□□□ -1.5
PMS1-214ENST00000446877 LUZP6Q538Z0 58 aa5.57□□□□□ -1.52
PMS1-214ENST00000446877 LCE1FQ5T754 118 aa5.37□□□□□ -1.55
PMS1-214ENST00000446877 KRTAP5-11Q6L8G4 156 aa5.37□□□□□ -1.55
PMS1-214ENST00000446877 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.23□□□□□ -1.57
PMS1-214ENST00000446877 LCE3DQ9BYE3 92 aa5.16□□□□□ -1.58
PMS1-214ENST00000446877 PHGR1C9JFL3 82 aa5.15□□□□□ -1.59
PMS1-214ENST00000446877 NDUFAF8A1L188 74 aa4.88□□□□□ -1.63
PMS1-214ENST00000446877 LCE3EQ5T5B0 92 aa4.84□□□□□ -1.63
PMS1-214ENST00000446877 KRTAP21-2Q3LI59 83 aa4.8□□□□□ -1.64
PMS1-214ENST00000446877 H3BS24 57 aa4.78□□□□□ -1.64
PMS1-214ENST00000446877 KRTAP4-4Q9BYR3 166 aa4.52□□□□□ -1.69
PMS1-214ENST00000446877 MUC19Q7Z5P9 8384 aa4.49□□□□□ -1.69
PMS1-214ENST00000446877 A0A0A0MQY5 61 aa4.12□□□□□ -1.75
PMS1-214ENST00000446877 INE1O15225 51 aa4.05□□□□□ -1.76
PMS1-214ENST00000446877 KRTAP21-1Q3LI58 79 aa3.92□□□□□ -1.78
PMS1-214ENST00000446877 PRM1P04553 51 aa3.86□□□□□ -1.79
PMS1-214ENST00000446877 MUC16Q8WXI7 14507 aa3.04□□□□□ -1.92
Retrieved 78 of 20,778 RNA–protein pairs in 62.6 ms