RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 PCP4P48539 62 aa5.28□□□□□ -1.56
HDAC4-204ENST00000446876 DSTQ03001 7570 aaKnown RBP5.26□□□□□ -1.57
HDAC4-204ENST00000446876 K7ERS5 55 aa5.25□□□□□ -1.57
HDAC4-204ENST00000446876 MT1MQ8N339 61 aa5.25□□□□□ -1.57
HDAC4-204ENST00000446876 PP632Q6XCG6 107 aa5.23□□□□□ -1.57
HDAC4-204ENST00000446876 A6NED7 52 aa5.22□□□□□ -1.57
HDAC4-204ENST00000446876 KRTAP12-3P60328 96 aa5.19□□□□□ -1.58
HDAC4-204ENST00000446876 KRTAP25-1Q3LHN0 102 aa5.19□□□□□ -1.58
HDAC4-204ENST00000446876 RPS28P62857 69 aaKnown RBP5.18□□□□□ -1.58
HDAC4-204ENST00000446876 KRTAP4-3Q9BYR4 195 aa5.17□□□□□ -1.58
HDAC4-204ENST00000446876 KRTAP4-7Q9BYR0 210 aa5.09□□□□□ -1.59
HDAC4-204ENST00000446876 KRTAP4-9Q9BYQ8 210 aa5.08□□□□□ -1.6
HDAC4-204ENST00000446876 CDC42SE1Q9NRR8 79 aa5.02□□□□□ -1.61
HDAC4-204ENST00000446876 KRTAP23-1A1A580 65 aa4.96□□□□□ -1.62
HDAC4-204ENST00000446876 ROMO1P60602 79 aa4.96□□□□□ -1.62
HDAC4-204ENST00000446876 LCE1DQ5T752 114 aa4.96□□□□□ -1.62
HDAC4-204ENST00000446876 LCE4AQ5TA78 99 aa4.95□□□□□ -1.62
HDAC4-204ENST00000446876 MT4P47944 62 aa4.94□□□□□ -1.62
HDAC4-204ENST00000446876 KRTAP5-4Q6L8H1 288 aa4.9□□□□□ -1.63
HDAC4-204ENST00000446876 KRTAP15-1Q3LI76 137 aa4.89□□□□□ -1.63
HDAC4-204ENST00000446876 HMCN1Q96RW7 5635 aa4.87□□□□□ -1.63
HDAC4-204ENST00000446876 GPR98Q8WXG9 6306 aa4.83□□□□□ -1.64
HDAC4-204ENST00000446876 LOC100996750A0A140TA64 210 aa4.82□□□□□ -1.64
HDAC4-204ENST00000446876 KRTAP4-6Q9BYQ5 205 aa4.81□□□□□ -1.64
HDAC4-204ENST00000446876 KRTAP19-4Q3LI73 84 aa4.79□□□□□ -1.64
HDAC4-204ENST00000446876 LCE3CQ5T5A8 94 aa4.79□□□□□ -1.64
HDAC4-204ENST00000446876 KRTAP5-5Q701N2 237 aaPredicted RBP4.79□□□□□ -1.64
HDAC4-204ENST00000446876 AHNAK2Q8IVF2 5795 aa4.7□□□□□ -1.66
HDAC4-204ENST00000446876 KRTAP20-2Q3LI61 65 aa4.63□□□□□ -1.67
HDAC4-204ENST00000446876 BRK1Q8WUW1 75 aa4.62□□□□□ -1.67
HDAC4-204ENST00000446876 KRTAP12-4P60329 112 aa4.6□□□□□ -1.67
HDAC4-204ENST00000446876 SYNE1Q8NF91 8797 aaKnown RBP4.6□□□□□ -1.67
HDAC4-204ENST00000446876 SPRR5A0A1B0GTR4 108 aa4.59□□□□□ -1.67
HDAC4-204ENST00000446876 KRTAP9-6A8MVA2 160 aa4.56□□□□□ -1.68
HDAC4-204ENST00000446876 KRTAP5-10Q6L8G5 202 aa4.53□□□□□ -1.68
HDAC4-204ENST00000446876 MT1AP04731 61 aa4.5□□□□□ -1.69
HDAC4-204ENST00000446876 KRTAP6-1Q3LI64 71 aa4.49□□□□□ -1.69
HDAC4-204ENST00000446876 KRTAP5-3Q6L8H2 238 aa4.49□□□□□ -1.69
HDAC4-204ENST00000446876 PMAIP1Q13794 54 aa4.32□□□□□ -1.72
HDAC4-204ENST00000446876 KRTAP5-2Q701N4 177 aa4.32□□□□□ -1.72
HDAC4-204ENST00000446876 KRTAP9-4Q9BYQ2 154 aa4.32□□□□□ -1.72
HDAC4-204ENST00000446876 KRTAP5-7Q6L8G8 165 aa4.31□□□□□ -1.72
HDAC4-204ENST00000446876 KRTAP6-2Q3LI66 62 aa4.26□□□□□ -1.73
HDAC4-204ENST00000446876 PRAC1Q96KF2 57 aa4.22□□□□□ -1.73
HDAC4-204ENST00000446876 KRTAP4-11Q9BYQ6 195 aa4.18□□□□□ -1.74
HDAC4-204ENST00000446876 MT3P25713 68 aa4.09□□□□□ -1.75
HDAC4-204ENST00000446876 PRO0628Q9UI54 55 aa4.07□□□□□ -1.76
HDAC4-204ENST00000446876 KRTAP5-8O75690 187 aa4.05□□□□□ -1.76
HDAC4-204ENST00000446876 OBSCNQ5VST9 7968 aa3.98□□□□□ -1.77
HDAC4-204ENST00000446876 KTN1-AS1Q86SY8 53 aa3.89□□□□□ -1.79
HDAC4-204ENST00000446876 KRTAP5-1Q6L8H4 278 aa3.86□□□□□ -1.79
HDAC4-204ENST00000446876 AHNAKQ09666 5890 aaKnown RBP3.82□□□□□ -1.8
HDAC4-204ENST00000446876 MUC5BQ9HC84 5762 aaPredicted RBP3.81□□□□□ -1.8
HDAC4-204ENST00000446876 MUC5ACP98088 5654 aa3.8□□□□□ -1.8
HDAC4-204ENST00000446876 KRTAP9-9Q9BYP9 154 aa3.8□□□□□ -1.8
HDAC4-204ENST00000446876 SVIPQ8NHG7 77 aa3.76□□□□□ -1.81
HDAC4-204ENST00000446876 LCE1EQ5T753 118 aa3.69□□□□□ -1.82
HDAC4-204ENST00000446876 LCE1BQ5T7P3 118 aa3.54□□□□□ -1.84
HDAC4-204ENST00000446876 KRTAP4-2Q9BYR5 136 aa3.54□□□□□ -1.84
HDAC4-204ENST00000446876 LCE3DQ9BYE3 92 aa3.46□□□□□ -1.86
HDAC4-204ENST00000446876 LUZP6Q538Z0 58 aa3.45□□□□□ -1.86
HDAC4-204ENST00000446876 LCE1CQ5T751 118 aa3.44□□□□□ -1.86
HDAC4-204ENST00000446876 LCE3EQ5T5B0 92 aa3.28□□□□□ -1.88
HDAC4-204ENST00000446876 KRTAP4-12Q9BQ66 201 aa3.19□□□□□ -1.9
HDAC4-204ENST00000446876 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.15□□□□□ -1.91
HDAC4-204ENST00000446876 KRTAP5-11Q6L8G4 156 aa3.12□□□□□ -1.91
HDAC4-204ENST00000446876 LCE1FQ5T754 118 aa2.96□□□□□ -1.94
HDAC4-204ENST00000446876 KRTAP21-2Q3LI59 83 aa2.95□□□□□ -1.94
HDAC4-204ENST00000446876 NDUFAF8A1L188 74 aa2.91□□□□□ -1.94
HDAC4-204ENST00000446876 KRTAP4-4Q9BYR3 166 aa2.72□□□□□ -1.97
HDAC4-204ENST00000446876 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
HDAC4-204ENST00000446876 PRM1P04553 51 aa2.57□□□□□ -2
HDAC4-204ENST00000446876 A0A0A0MQY5 61 aa2.5□□□□□ -2.01
HDAC4-204ENST00000446876 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
HDAC4-204ENST00000446876 H3BS24 57 aa2.41□□□□□ -2.02
HDAC4-204ENST00000446876 INE1O15225 51 aa2.35□□□□□ -2.03
HDAC4-204ENST00000446876 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
HDAC4-204ENST00000446876 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 105 ms