RNA–Protein interactions for RNA: ENST00000445654.2

SHANK2-209, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 522 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-209ENST00000445654 A0A0D9SG42 100 aa4.95□□□□□ -1.62
SHANK2-209ENST00000445654 LINC01558Q9Y6Z2 57 aa4.93□□□□□ -1.62
SHANK2-209ENST00000445654 PCP4P48539 62 aa4.92□□□□□ -1.62
SHANK2-209ENST00000445654 KRTAP19-5Q3LI72 72 aa4.92□□□□□ -1.62
SHANK2-209ENST00000445654 SMIM26A0A096LP01 95 aa4.88□□□□□ -1.63
SHANK2-209ENST00000445654 SPINT4Q6UDR6 99 aa4.88□□□□□ -1.63
SHANK2-209ENST00000445654 MT1LQ93083 61 aa4.87□□□□□ -1.63
SHANK2-209ENST00000445654 KRTAP20-2Q3LI61 65 aa4.86□□□□□ -1.63
SHANK2-209ENST00000445654 A8MU10 97 aa4.83□□□□□ -1.64
SHANK2-209ENST00000445654 KRTAP12-1P59990 96 aa4.82□□□□□ -1.64
SHANK2-209ENST00000445654 KRTAP4-3Q9BYR4 195 aa4.81□□□□□ -1.64
SHANK2-209ENST00000445654 V9GYY9 64 aa4.81□□□□□ -1.64
SHANK2-209ENST00000445654 UQCR11O14957 56 aa4.79□□□□□ -1.64
SHANK2-209ENST00000445654 Q1T7F1 81 aa4.77□□□□□ -1.65
SHANK2-209ENST00000445654 PSPHP1O15172 72 aa4.76□□□□□ -1.65
SHANK2-209ENST00000445654 KRTAP12-4P60329 112 aa4.74□□□□□ -1.65
SHANK2-209ENST00000445654 RPS28P62857 69 aaKnown RBP4.73□□□□□ -1.65
SHANK2-209ENST00000445654 AHNAKQ09666 5890 aaKnown RBP4.73□□□□□ -1.65
SHANK2-209ENST00000445654 MIR22HGQ0VDD5 57 aa4.71□□□□□ -1.66
SHANK2-209ENST00000445654 MUC5ACP98088 5654 aa4.63□□□□□ -1.67
SHANK2-209ENST00000445654 A6NED7 52 aa4.62□□□□□ -1.67
SHANK2-209ENST00000445654 KRTAP5-5Q701N2 237 aaPredicted RBP4.62□□□□□ -1.67
SHANK2-209ENST00000445654 C10orf95Q9H7T3 257 aa4.61□□□□□ -1.67
SHANK2-209ENST00000445654 K7ERS5 55 aa4.6□□□□□ -1.67
SHANK2-209ENST00000445654 KRTAP4-11Q9BYQ6 195 aa4.58□□□□□ -1.68
SHANK2-209ENST00000445654 TNP1P09430 55 aa4.55□□□□□ -1.68
SHANK2-209ENST00000445654 MUC5BQ9HC84 5762 aaPredicted RBP4.55□□□□□ -1.68
SHANK2-209ENST00000445654 LCE3AQ5TA76 89 aa4.53□□□□□ -1.68
SHANK2-209ENST00000445654 KRTAP4-7Q9BYR0 210 aa4.52□□□□□ -1.69
SHANK2-209ENST00000445654 SYNE1Q8NF91 8797 aaKnown RBP4.52□□□□□ -1.69
SHANK2-209ENST00000445654 KRTAP5-8O75690 187 aa4.43□□□□□ -1.7
SHANK2-209ENST00000445654 CDC42SE1Q9NRR8 79 aa4.42□□□□□ -1.7
SHANK2-209ENST00000445654 KRTAP25-1Q3LHN0 102 aa4.4□□□□□ -1.71
SHANK2-209ENST00000445654 KRTAP12-3P60328 96 aa4.39□□□□□ -1.71
SHANK2-209ENST00000445654 KRTAP5-2Q701N4 177 aa4.37□□□□□ -1.71
SHANK2-209ENST00000445654 KRTAP9-9Q9BYP9 154 aa4.37□□□□□ -1.71
SHANK2-209ENST00000445654 LOC100996750A0A140TA64 210 aa4.32□□□□□ -1.72
SHANK2-209ENST00000445654 ROMO1P60602 79 aa4.3□□□□□ -1.72
SHANK2-209ENST00000445654 SVIPQ8NHG7 77 aa4.27□□□□□ -1.73
SHANK2-209ENST00000445654 KRTAP19-4Q3LI73 84 aa4.26□□□□□ -1.73
SHANK2-209ENST00000445654 OBSCNQ5VST9 7968 aa4.26□□□□□ -1.73
SHANK2-209ENST00000445654 BRK1Q8WUW1 75 aa4.23□□□□□ -1.73
SHANK2-209ENST00000445654 KRTAP23-1A1A580 65 aa4.22□□□□□ -1.73
SHANK2-209ENST00000445654 MT1AP04731 61 aa4.16□□□□□ -1.74
SHANK2-209ENST00000445654 KRTAP6-1Q3LI64 71 aa4.12□□□□□ -1.75
SHANK2-209ENST00000445654 KRTAP9-4Q9BYQ2 154 aa4.11□□□□□ -1.75
SHANK2-209ENST00000445654 KRTAP15-1Q3LI76 137 aa4.07□□□□□ -1.76
SHANK2-209ENST00000445654 KRTAP6-2Q3LI66 62 aa4.06□□□□□ -1.76
SHANK2-209ENST00000445654 KRTAP5-1Q6L8H4 278 aa4.01□□□□□ -1.77
SHANK2-209ENST00000445654 PMAIP1Q13794 54 aa4□□□□□ -1.77
SHANK2-209ENST00000445654 LCE3CQ5T5A8 94 aa3.98□□□□□ -1.77
SHANK2-209ENST00000445654 PRO0628Q9UI54 55 aa3.89□□□□□ -1.79
SHANK2-209ENST00000445654 MT3P25713 68 aa3.87□□□□□ -1.79
SHANK2-209ENST00000445654 PRAC1Q96KF2 57 aa3.77□□□□□ -1.81
SHANK2-209ENST00000445654 LCE1EQ5T753 118 aa3.7□□□□□ -1.82
SHANK2-209ENST00000445654 KRTAP9-6A8MVA2 160 aa3.69□□□□□ -1.82
SHANK2-209ENST00000445654 KTN1-AS1Q86SY8 53 aa3.64□□□□□ -1.83
SHANK2-209ENST00000445654 H3BS24 57 aa3.63□□□□□ -1.83
SHANK2-209ENST00000445654 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
SHANK2-209ENST00000445654 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
SHANK2-209ENST00000445654 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
SHANK2-209ENST00000445654 KRTAP4-12Q9BQ66 201 aa3.34□□□□□ -1.87
SHANK2-209ENST00000445654 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
SHANK2-209ENST00000445654 KRTAP5-11Q6L8G4 156 aa3.24□□□□□ -1.89
SHANK2-209ENST00000445654 PHGR1C9JFL3 82 aa3.18□□□□□ -1.9
SHANK2-209ENST00000445654 LUZP6Q538Z0 58 aa3.18□□□□□ -1.9
SHANK2-209ENST00000445654 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.03□□□□□ -1.92
SHANK2-209ENST00000445654 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
SHANK2-209ENST00000445654 NDUFAF8A1L188 74 aa2.8□□□□□ -1.96
SHANK2-209ENST00000445654 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
SHANK2-209ENST00000445654 KRTAP21-2Q3LI59 83 aa2.72□□□□□ -1.97
SHANK2-209ENST00000445654 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
SHANK2-209ENST00000445654 A0A0A0MQY5 61 aa2.6□□□□□ -1.99
SHANK2-209ENST00000445654 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
SHANK2-209ENST00000445654 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
SHANK2-209ENST00000445654 INE1O15225 51 aa2.39□□□□□ -2.03
SHANK2-209ENST00000445654 PRM1P04553 51 aa2.21□□□□□ -2.06
SHANK2-209ENST00000445654 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 9.7 ms