RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 GPR98Q8WXG9 6306 aa7.37□□□□□ -1.23
CDKN3-204ENST00000442975 PSPHP1O15172 72 aa7.33□□□□□ -1.24
CDKN3-204ENST00000442975 KRTAP4-3Q9BYR4 195 aa7.32□□□□□ -1.24
CDKN3-204ENST00000442975 KRTAP12-3P60328 96 aa7.31□□□□□ -1.24
CDKN3-204ENST00000442975 K7ERS5 55 aa7.3□□□□□ -1.24
CDKN3-204ENST00000442975 V9GYY9 64 aa7.3□□□□□ -1.24
CDKN3-204ENST00000442975 KRTAP25-1Q3LHN0 102 aa7.23□□□□□ -1.25
CDKN3-204ENST00000442975 Q1T7F1 81 aa7.22□□□□□ -1.25
CDKN3-204ENST00000442975 LCE1DQ5T752 114 aa7.21□□□□□ -1.26
CDKN3-204ENST00000442975 LOC100996750A0A140TA64 210 aa7.2□□□□□ -1.26
CDKN3-204ENST00000442975 KRTAP4-6Q9BYQ5 205 aa7.2□□□□□ -1.26
CDKN3-204ENST00000442975 HMCN1Q96RW7 5635 aa7.19□□□□□ -1.26
CDKN3-204ENST00000442975 MT4P47944 62 aa7.18□□□□□ -1.26
CDKN3-204ENST00000442975 LCE4AQ5TA78 99 aa7.18□□□□□ -1.26
CDKN3-204ENST00000442975 KRTAP4-7Q9BYR0 210 aa7.16□□□□□ -1.26
CDKN3-204ENST00000442975 A6NED7 52 aa7.09□□□□□ -1.27
CDKN3-204ENST00000442975 KRTAP5-4Q6L8H1 288 aa7.04□□□□□ -1.28
CDKN3-204ENST00000442975 AHNAK2Q8IVF2 5795 aa6.93□□□□□ -1.3
CDKN3-204ENST00000442975 CDC42SE1Q9NRR8 79 aa6.91□□□□□ -1.3
CDKN3-204ENST00000442975 KRTAP23-1A1A580 65 aa6.89□□□□□ -1.31
CDKN3-204ENST00000442975 RPS28P62857 69 aaKnown RBP6.83□□□□□ -1.32
CDKN3-204ENST00000442975 PCP4P48539 62 aa6.82□□□□□ -1.32
CDKN3-204ENST00000442975 KRTAP15-1Q3LI76 137 aa6.82□□□□□ -1.32
CDKN3-204ENST00000442975 KRTAP5-5Q701N2 237 aaPredicted RBP6.81□□□□□ -1.32
CDKN3-204ENST00000442975 ROMO1P60602 79 aa6.79□□□□□ -1.32
CDKN3-204ENST00000442975 KRTAP19-4Q3LI73 84 aa6.77□□□□□ -1.33
CDKN3-204ENST00000442975 LCE3CQ5T5A8 94 aa6.71□□□□□ -1.34
CDKN3-204ENST00000442975 KRTAP20-2Q3LI61 65 aa6.68□□□□□ -1.34
CDKN3-204ENST00000442975 KRTAP12-4P60329 112 aa6.66□□□□□ -1.34
CDKN3-204ENST00000442975 KRTAP5-10Q6L8G5 202 aa6.64□□□□□ -1.35
CDKN3-204ENST00000442975 SPRR5A0A1B0GTR4 108 aa6.62□□□□□ -1.35
CDKN3-204ENST00000442975 SYNE1Q8NF91 8797 aaKnown RBP6.58□□□□□ -1.36
CDKN3-204ENST00000442975 KRTAP5-3Q6L8H2 238 aa6.51□□□□□ -1.37
CDKN3-204ENST00000442975 KRTAP4-12Q9BQ66 201 aa6.39□□□□□ -1.39
CDKN3-204ENST00000442975 MT1AP04731 61 aa6.38□□□□□ -1.39
CDKN3-204ENST00000442975 KRTAP5-7Q6L8G8 165 aa6.37□□□□□ -1.39
CDKN3-204ENST00000442975 KRTAP6-1Q3LI64 71 aa6.35□□□□□ -1.39
CDKN3-204ENST00000442975 KRTAP9-6A8MVA2 160 aa6.33□□□□□ -1.4
CDKN3-204ENST00000442975 KRTAP5-2Q701N4 177 aa6.18□□□□□ -1.42
CDKN3-204ENST00000442975 KRTAP9-9Q9BYP9 154 aa6.17□□□□□ -1.42
CDKN3-204ENST00000442975 KRTAP9-4Q9BYQ2 154 aa6.17□□□□□ -1.42
CDKN3-204ENST00000442975 H3BS24 57 aa6.13□□□□□ -1.43
CDKN3-204ENST00000442975 BRK1Q8WUW1 75 aa6.12□□□□□ -1.43
CDKN3-204ENST00000442975 KRTAP4-11Q9BYQ6 195 aa6.08□□□□□ -1.44
CDKN3-204ENST00000442975 KRTAP6-2Q3LI66 62 aa6.07□□□□□ -1.44
CDKN3-204ENST00000442975 OBSCNQ5VST9 7968 aa5.86□□□□□ -1.47
CDKN3-204ENST00000442975 KRTAP5-8O75690 187 aa5.86□□□□□ -1.47
CDKN3-204ENST00000442975 MT3P25713 68 aa5.83□□□□□ -1.48
CDKN3-204ENST00000442975 AHNAKQ09666 5890 aaKnown RBP5.75□□□□□ -1.49
CDKN3-204ENST00000442975 MUC5BQ9HC84 5762 aaPredicted RBP5.7□□□□□ -1.5
CDKN3-204ENST00000442975 PMAIP1Q13794 54 aa5.7□□□□□ -1.5
CDKN3-204ENST00000442975 MUC5ACP98088 5654 aa5.67□□□□□ -1.5
CDKN3-204ENST00000442975 KRTAP4-2Q9BYR5 136 aa5.59□□□□□ -1.51
CDKN3-204ENST00000442975 PRAC1Q96KF2 57 aa5.55□□□□□ -1.52
CDKN3-204ENST00000442975 KRTAP5-1Q6L8H4 278 aa5.54□□□□□ -1.52
CDKN3-204ENST00000442975 LCE1EQ5T753 118 aa5.3□□□□□ -1.56
CDKN3-204ENST00000442975 PRO0628Q9UI54 55 aa5.25□□□□□ -1.57
CDKN3-204ENST00000442975 LCE1BQ5T7P3 118 aa5.09□□□□□ -1.59
CDKN3-204ENST00000442975 KTN1-AS1Q86SY8 53 aa5.06□□□□□ -1.6
CDKN3-204ENST00000442975 SVIPQ8NHG7 77 aa4.96□□□□□ -1.62
CDKN3-204ENST00000442975 LCE1CQ5T751 118 aa4.93□□□□□ -1.62
CDKN3-204ENST00000442975 LCE3DQ9BYE3 92 aa4.85□□□□□ -1.63
CDKN3-204ENST00000442975 LUZP6Q538Z0 58 aa4.69□□□□□ -1.66
CDKN3-204ENST00000442975 LCE3EQ5T5B0 92 aa4.57□□□□□ -1.68
CDKN3-204ENST00000442975 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.48□□□□□ -1.69
CDKN3-204ENST00000442975 KRTAP5-11Q6L8G4 156 aa4.47□□□□□ -1.69
CDKN3-204ENST00000442975 LCE1FQ5T754 118 aa4.3□□□□□ -1.72
CDKN3-204ENST00000442975 KRTAP21-2Q3LI59 83 aa4.15□□□□□ -1.75
CDKN3-204ENST00000442975 PHGR1C9JFL3 82 aa3.91□□□□□ -1.78
CDKN3-204ENST00000442975 KRTAP4-4Q9BYR3 166 aa3.86□□□□□ -1.79
CDKN3-204ENST00000442975 NDUFAF8A1L188 74 aa3.73□□□□□ -1.81
CDKN3-204ENST00000442975 MUC19Q7Z5P9 8384 aa3.63□□□□□ -1.83
CDKN3-204ENST00000442975 PRM1P04553 51 aa3.49□□□□□ -1.85
CDKN3-204ENST00000442975 A0A0A0MQY5 61 aa3.41□□□□□ -1.86
CDKN3-204ENST00000442975 KRTAP21-1Q3LI58 79 aa2.95□□□□□ -1.94
CDKN3-204ENST00000442975 INE1O15225 51 aa2.93□□□□□ -1.94
CDKN3-204ENST00000442975 MUC16Q8WXI7 14507 aa2.45□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 10.9 ms