RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 KRTAP4-3Q9BYR4 195 aa4.07□□□□□ -1.76
TTC28-203ENST00000442232 AHNAK2Q8IVF2 5795 aa4.06□□□□□ -1.76
TTC28-203ENST00000442232 KRTAP5-4Q6L8H1 288 aa4.04□□□□□ -1.76
TTC28-203ENST00000442232 ATP5EP56381 51 aaPredicted RBP4.03□□□□□ -1.76
TTC28-203ENST00000442232 SVIPQ8NHG7 77 aa4.01□□□□□ -1.77
TTC28-203ENST00000442232 KRTAP12-3P60328 96 aa4□□□□□ -1.77
TTC28-203ENST00000442232 KRTAP4-6Q9BYQ5 205 aa3.98□□□□□ -1.77
TTC28-203ENST00000442232 LINC01558Q9Y6Z2 57 aa3.96□□□□□ -1.78
TTC28-203ENST00000442232 CCDC179H3BU77 68 aa3.95□□□□□ -1.78
TTC28-203ENST00000442232 UQCR11O14957 56 aa3.94□□□□□ -1.78
TTC28-203ENST00000442232 KRTAP5-10Q6L8G5 202 aa3.94□□□□□ -1.78
TTC28-203ENST00000442232 KRTAP4-7Q9BYR0 210 aa3.93□□□□□ -1.78
TTC28-203ENST00000442232 KRTAP25-1Q3LHN0 102 aa3.87□□□□□ -1.79
TTC28-203ENST00000442232 K7ERS5 55 aa3.86□□□□□ -1.79
TTC28-203ENST00000442232 PCP4P48539 62 aa3.86□□□□□ -1.79
TTC28-203ENST00000442232 TMEM258P61165 79 aa3.85□□□□□ -1.79
TTC28-203ENST00000442232 KRTAP12-4P60329 112 aa3.84□□□□□ -1.79
TTC28-203ENST00000442232 KRTAP20-2Q3LI61 65 aa3.84□□□□□ -1.79
TTC28-203ENST00000442232 SPRR5A0A1B0GTR4 108 aa3.83□□□□□ -1.8
TTC28-203ENST00000442232 MIR22HGQ0VDD5 57 aa3.83□□□□□ -1.8
TTC28-203ENST00000442232 KRTAP5-3Q6L8H2 238 aa3.83□□□□□ -1.8
TTC28-203ENST00000442232 KRTAP5-7Q6L8G8 165 aa3.82□□□□□ -1.8
TTC28-203ENST00000442232 KRTAP5-5Q701N2 237 aaPredicted RBP3.82□□□□□ -1.8
TTC28-203ENST00000442232 KRTAP19-4Q3LI73 84 aa3.78□□□□□ -1.8
TTC28-203ENST00000442232 LOC100996750A0A140TA64 210 aa3.73□□□□□ -1.81
TTC28-203ENST00000442232 KRTAP23-1A1A580 65 aa3.7□□□□□ -1.82
TTC28-203ENST00000442232 V9GYY9 64 aa3.7□□□□□ -1.82
TTC28-203ENST00000442232 KRTAP15-1Q3LI76 137 aa3.69□□□□□ -1.82
TTC28-203ENST00000442232 PSPHP1O15172 72 aa3.68□□□□□ -1.82
TTC28-203ENST00000442232 LCE3CQ5T5A8 94 aa3.66□□□□□ -1.82
TTC28-203ENST00000442232 SYNE1Q8NF91 8797 aaKnown RBP3.6□□□□□ -1.83
TTC28-203ENST00000442232 Q1T7F1 81 aa3.6□□□□□ -1.83
TTC28-203ENST00000442232 CDC42SE1Q9NRR8 79 aa3.6□□□□□ -1.83
TTC28-203ENST00000442232 A6NED7 52 aa3.58□□□□□ -1.84
TTC28-203ENST00000442232 MT1AP04731 61 aa3.56□□□□□ -1.84
TTC28-203ENST00000442232 RPS28P62857 69 aaKnown RBP3.55□□□□□ -1.84
TTC28-203ENST00000442232 KRTAP4-11Q9BYQ6 195 aa3.54□□□□□ -1.84
TTC28-203ENST00000442232 KRTAP6-1Q3LI64 71 aa3.53□□□□□ -1.84
TTC28-203ENST00000442232 ROMO1P60602 79 aa3.51□□□□□ -1.85
TTC28-203ENST00000442232 KRTAP5-2Q701N4 177 aa3.51□□□□□ -1.85
TTC28-203ENST00000442232 KRTAP9-4Q9BYQ2 154 aa3.44□□□□□ -1.86
TTC28-203ENST00000442232 KRTAP6-2Q3LI66 62 aa3.41□□□□□ -1.86
TTC28-203ENST00000442232 KRTAP5-8O75690 187 aa3.4□□□□□ -1.87
TTC28-203ENST00000442232 AHNAKQ09666 5890 aaKnown RBP3.39□□□□□ -1.87
TTC28-203ENST00000442232 KRTAP9-6A8MVA2 160 aa3.39□□□□□ -1.87
TTC28-203ENST00000442232 MUC5BQ9HC84 5762 aaPredicted RBP3.37□□□□□ -1.87
TTC28-203ENST00000442232 MUC5ACP98088 5654 aa3.34□□□□□ -1.87
TTC28-203ENST00000442232 KRTAP9-9Q9BYP9 154 aa3.31□□□□□ -1.88
TTC28-203ENST00000442232 MT3P25713 68 aa3.29□□□□□ -1.88
TTC28-203ENST00000442232 OBSCNQ5VST9 7968 aa3.2□□□□□ -1.9
TTC28-203ENST00000442232 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
TTC28-203ENST00000442232 PRO0628Q9UI54 55 aa3.16□□□□□ -1.9
TTC28-203ENST00000442232 LCE1EQ5T753 118 aa3.02□□□□□ -1.93
TTC28-203ENST00000442232 PMAIP1Q13794 54 aa2.99□□□□□ -1.93
TTC28-203ENST00000442232 BRK1Q8WUW1 75 aa2.97□□□□□ -1.93
TTC28-203ENST00000442232 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
TTC28-203ENST00000442232 KTN1-AS1Q86SY8 53 aa2.86□□□□□ -1.95
TTC28-203ENST00000442232 KRTAP4-2Q9BYR5 136 aa2.84□□□□□ -1.95
TTC28-203ENST00000442232 H3BS24 57 aa2.81□□□□□ -1.96
TTC28-203ENST00000442232 LCE1CQ5T751 118 aa2.8□□□□□ -1.96
TTC28-203ENST00000442232 KRTAP4-12Q9BQ66 201 aa2.63□□□□□ -1.99
TTC28-203ENST00000442232 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
TTC28-203ENST00000442232 PRAC1Q96KF2 57 aa2.62□□□□□ -1.99
TTC28-203ENST00000442232 KRTAP5-11Q6L8G4 156 aa2.55□□□□□ -2
TTC28-203ENST00000442232 A0A0A0MQY5 61 aa2.53□□□□□ -2
TTC28-203ENST00000442232 LCE1FQ5T754 118 aa2.52□□□□□ -2.01
TTC28-203ENST00000442232 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.51□□□□□ -2.01
TTC28-203ENST00000442232 LCE3EQ5T5B0 92 aa2.45□□□□□ -2.02
TTC28-203ENST00000442232 PHGR1C9JFL3 82 aa2.34□□□□□ -2.03
TTC28-203ENST00000442232 LUZP6Q538Z0 58 aa2.34□□□□□ -2.03
TTC28-203ENST00000442232 NDUFAF8A1L188 74 aa2.31□□□□□ -2.04
TTC28-203ENST00000442232 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
TTC28-203ENST00000442232 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.07
TTC28-203ENST00000442232 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
TTC28-203ENST00000442232 INE1O15225 51 aa1.93□□□□□ -2.1
TTC28-203ENST00000442232 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
TTC28-203ENST00000442232 PRM1P04553 51 aa1.77□□□□□ -2.13
TTC28-203ENST00000442232 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 114.4 ms