RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 V9GYY9 64 aa4.63□□□□□ -1.67
CSTF3-203ENST00000438862 M0QZ58 72 aa4.62□□□□□ -1.67
CSTF3-203ENST00000438862 PRR15LQ9BU68 103 aa4.62□□□□□ -1.67
CSTF3-203ENST00000438862 R4GN34 69 aa4.61□□□□□ -1.67
CSTF3-203ENST00000438862 Q1T7F1 81 aa4.59□□□□□ -1.67
CSTF3-203ENST00000438862 A0A1B0GU33 70 aa4.56□□□□□ -1.68
CSTF3-203ENST00000438862 PLAC4Q8WY50 150 aa4.53□□□□□ -1.68
CSTF3-203ENST00000438862 A0A0A0MQY5 61 aa4.51□□□□□ -1.69
CSTF3-203ENST00000438862 UQCR11O14957 56 aa4.48□□□□□ -1.69
CSTF3-203ENST00000438862 KRTAP10-12P60413 245 aa4.47□□□□□ -1.69
CSTF3-203ENST00000438862 KRTAP13-4Q3LI77 160 aa4.47□□□□□ -1.69
CSTF3-203ENST00000438862 KRTAP5-10Q6L8G5 202 aa4.45□□□□□ -1.7
CSTF3-203ENST00000438862 PSPHP1O15172 72 aa4.44□□□□□ -1.7
CSTF3-203ENST00000438862 LINC01554Q52M75 96 aa4.44□□□□□ -1.7
CSTF3-203ENST00000438862 LCE1FQ5T754 118 aa4.43□□□□□ -1.7
CSTF3-203ENST00000438862 SPATA8Q6RVD6 105 aa4.43□□□□□ -1.7
CSTF3-203ENST00000438862 HMCN1Q96RW7 5635 aa4.39□□□□□ -1.71
CSTF3-203ENST00000438862 MIR22HGQ0VDD5 57 aa4.37□□□□□ -1.71
CSTF3-203ENST00000438862 AHNAK2Q8IVF2 5795 aa4.37□□□□□ -1.71
CSTF3-203ENST00000438862 KRTAP5-7Q6L8G8 165 aa4.36□□□□□ -1.71
CSTF3-203ENST00000438862 A0A0D9SG42 100 aa4.35□□□□□ -1.71
CSTF3-203ENST00000438862 A6NED7 52 aa4.34□□□□□ -1.71
CSTF3-203ENST00000438862 MT4P47944 62 aa4.34□□□□□ -1.71
CSTF3-203ENST00000438862 A8MU10 97 aa4.33□□□□□ -1.72
CSTF3-203ENST00000438862 KRTAP12-1P59990 96 aa4.33□□□□□ -1.72
CSTF3-203ENST00000438862 SPINT4Q6UDR6 99 aa4.3□□□□□ -1.72
CSTF3-203ENST00000438862 OBSCNQ5VST9 7968 aa4.3□□□□□ -1.72
CSTF3-203ENST00000438862 CAMK2N1Q7Z7J9 78 aa4.28□□□□□ -1.72
CSTF3-203ENST00000438862 K7ERS5 55 aa4.27□□□□□ -1.73
CSTF3-203ENST00000438862 CDC42SE1Q9NRR8 79 aa4.26□□□□□ -1.73
CSTF3-203ENST00000438862 KRTAP19-3Q7Z4W3 81 aa4.24□□□□□ -1.73
CSTF3-203ENST00000438862 SPRR5A0A1B0GTR4 108 aa4.22□□□□□ -1.73
CSTF3-203ENST00000438862 KRTAP4-3Q9BYR4 195 aa4.22□□□□□ -1.73
CSTF3-203ENST00000438862 LCE3CQ5T5A8 94 aa4.2□□□□□ -1.74
CSTF3-203ENST00000438862 KRTAP19-7Q3SYF9 63 aa4.15□□□□□ -1.75
CSTF3-203ENST00000438862 MT1EP04732 61 aa4.14□□□□□ -1.75
CSTF3-203ENST00000438862 MT1GP13640 62 aa4.1□□□□□ -1.75
CSTF3-203ENST00000438862 BRK1Q8WUW1 75 aa4.1□□□□□ -1.75
CSTF3-203ENST00000438862 C10orf95Q9H7T3 257 aa4.1□□□□□ -1.75
CSTF3-203ENST00000438862 PP632Q6XCG6 107 aa4.09□□□□□ -1.75
CSTF3-203ENST00000438862 TNP1P09430 55 aa4.07□□□□□ -1.76
CSTF3-203ENST00000438862 KRTAP5-2Q701N4 177 aa4.05□□□□□ -1.76
CSTF3-203ENST00000438862 KRTAP25-1Q3LHN0 102 aa4.03□□□□□ -1.76
CSTF3-203ENST00000438862 ROMO1P60602 79 aa4.01□□□□□ -1.77
CSTF3-203ENST00000438862 MT1MQ8N339 61 aa3.99□□□□□ -1.77
CSTF3-203ENST00000438862 PRO0628Q9UI54 55 aa3.95□□□□□ -1.78
CSTF3-203ENST00000438862 KRTAP20-2Q3LI61 65 aa3.94□□□□□ -1.78
CSTF3-203ENST00000438862 PMAIP1Q13794 54 aa3.91□□□□□ -1.78
CSTF3-203ENST00000438862 LCE3AQ5TA76 89 aa3.91□□□□□ -1.78
CSTF3-203ENST00000438862 KRTAP19-5Q3LI72 72 aa3.9□□□□□ -1.79
CSTF3-203ENST00000438862 MT1LQ93083 61 aa3.87□□□□□ -1.79
CSTF3-203ENST00000438862 LCE3EQ5T5B0 92 aa3.83□□□□□ -1.8
CSTF3-203ENST00000438862 KRTAP12-4P60329 112 aa3.8□□□□□ -1.8
CSTF3-203ENST00000438862 AHNAKQ09666 5890 aaKnown RBP3.77□□□□□ -1.81
CSTF3-203ENST00000438862 KRTAP12-3P60328 96 aa3.76□□□□□ -1.81
CSTF3-203ENST00000438862 MUC5ACP98088 5654 aa3.74□□□□□ -1.81
CSTF3-203ENST00000438862 NDUFAF8A1L188 74 aa3.72□□□□□ -1.81
CSTF3-203ENST00000438862 KRTAP5-5Q701N2 237 aaPredicted RBP3.71□□□□□ -1.82
CSTF3-203ENST00000438862 KTN1-AS1Q86SY8 53 aa3.68□□□□□ -1.82
CSTF3-203ENST00000438862 MUC5BQ9HC84 5762 aaPredicted RBP3.67□□□□□ -1.82
CSTF3-203ENST00000438862 PRAC1Q96KF2 57 aa3.67□□□□□ -1.82
CSTF3-203ENST00000438862 KRTAP5-8O75690 187 aa3.65□□□□□ -1.83
CSTF3-203ENST00000438862 SYNE1Q8NF91 8797 aaKnown RBP3.6□□□□□ -1.83
CSTF3-203ENST00000438862 LCE1CQ5T751 118 aa3.44□□□□□ -1.86
CSTF3-203ENST00000438862 LCE1BQ5T7P3 118 aa3.44□□□□□ -1.86
CSTF3-203ENST00000438862 MT1AP04731 61 aa3.29□□□□□ -1.88
CSTF3-203ENST00000438862 KRTAP6-1Q3LI64 71 aa3.29□□□□□ -1.88
CSTF3-203ENST00000438862 KRTAP6-2Q3LI66 62 aa3.26□□□□□ -1.89
CSTF3-203ENST00000438862 LUZP6Q538Z0 58 aa3.08□□□□□ -1.92
CSTF3-203ENST00000438862 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
CSTF3-203ENST00000438862 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.94
CSTF3-203ENST00000438862 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
CSTF3-203ENST00000438862 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
CSTF3-203ENST00000438862 INE1O15225 51 aa2.37□□□□□ -2.03
CSTF3-203ENST00000438862 PRM1P04553 51 aa2.03□□□□□ -2.08
CSTF3-203ENST00000438862 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
CSTF3-203ENST00000438862 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 78.1 ms